PDB ID 2D07     CHAIN B
Protein name Ubiquitin-like protein SMT3B
Uniprot Accession P61956
The number of similar proteins 23
The number of binding states 12
The number of binding partners 10

Coloring

Unicolor (beige)

The number of binding partners

Group

Binding
state		 Binding partners
2D07 (CHAIN: B)
1 Q13569  
2 Monomeric state
3 Q6VMQ6  
4 P55854  
5 Q9JJX7  
6 Q9HC62  
7 5EQL  
8 P61956   P61956  
9 Q9Y4E5   P63279  
10 P46060   P63279   P49792  
11 Q9Y4E5   P46060   P63279  
12 P46060   P46060   Q9HC62   Q9HC62  

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Molecule viewer


Only interaction residues
#binding
partners
  7
  6
  5
  4
  3
  2
  1
  0

Sequence information

1   MADEKPKEGV   KTENNDHINL   KVAGQDGSVV   QFKIKRHTPL   SKLMKAYCER   50
51   QGLSMRQIRF   RFDGQPINET   DTPAQLEMED   EDTIDVFQQQ   TGG   100

Variants

Residue AA Source dbSNP Clinical
Significance
 Allele
Frequency
(> 0.0001)		 Disease name
16_ASP ASN VAR_047508 rs17850328
Polymorphism - -
38_THR MET 8.3kJPN
chr21:46233931 		rs1482161206
- 0.0001 -
51_ARG GLN gnomAD
chr6:149721679 		rs57327874
- 0.000815135 -
51_ARG TRP 8.3kJPN
chr6:149721678 		rs569573383
- 0.0001 -
55_VAL MET gnomAD
chr6:149721690 		rs237025
- 0.553677 -
55_VAL MET 8.3kJPN
chr6:149721690 		rs237025
- 0.688 -
67_ILE VAL gnomAD
chr6:149721726 		rs143374045
- 0.000318107 -
84_ILE THR 8.3kJPN
chr6:149721778 		rs777445425
- 0.0002 -
88_GLN ARG 8.3kJPN
chr6:149721790 		-
- 0.0001 -
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Reference

PiSite: a database of protein interaction sites using multiple binding states in the PDB, Miho Higurashi, Takashi Ishida and Kengo Kinoshita, Nucleic Acids Research 2009 37(Database issue):D360-D364

COPYRIGHTc2008-2019 Miho Higurashi, Takashi Ishida and Kengo Kinoshita. All rights reserved.