PDB ID 1TFG     CHAIN A
Protein name TRANSFORMING GROWTH FACTOR, BETA 2
Uniprot Accession P61812
The number of similar proteins 10
The number of binding states 5
The number of binding partners 4

Coloring

Unicolor (beige)

The number of binding partners

Group

Binding
state
Binding partners
1TFG (CHAIN: A)
1 Monomeric state
2 P26342  
3 P61812   4KXZ   4KXZ   4KXZ  
4 P61812   6XM2   6XM2   6XM2   6XM2  
5 P61812   7RCO   7RCO   7RCO   7RCO  

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Format:

Molecule viewer


Only interaction residues
#binding
partners
  3
  2
  1
  0

Sequence information

1   ALDAAYCFRN   VQDNCCLRPL   YIDFKRDLGW   KWIHEPKGYN   ANFCAGACPY   50
51   LWSSDTQHSR   VLSLYNTINP   EASASPCCVS   QDLEPLTILY   YIGKTPKIEQ   100
101   LSNMIVKSCK   CS         150

Variants

Residue AA Source dbSNP Clinical
Significance
Allele
Frequency
(> 0.0001)
Disease name
4_ALA VAL 8.3kJPN
chr1:218609474
rs989462091
- 0.0001 -
5_ALA VAL 8.3kJPN
chr1:218609477
-
- 0.0001 -
9_ARG LYS ClinVar
chr1:218609489
rs1064793278
Likely pathogenic - not provided [MedGen:CN517202]
16_CYS PHE ClinVar
chr1:218610705
rs863223793
Likely pathogenic - not provided [MedGen:CN517202]
18_ARG CYS VAR_072740 rs1553303352
LB/B - -
18_ARG CYS ClinVar
chr1:218610710
rs1553303352
Pathogenic/Likely pathogenic - Loeys-Dietz syndrome 4|not provided [MONDO:MONDO:0013897,MedGen:C3553762,OMIM:614816|MedGen:C3661900]
18_ARG HIS 8.3kJPN
chr1:218610711
rs896426406
- 0.0001 -
36_PRO HIS VAR_068934 rs387907278
LP/P - Loeys-Dietz syndrome 4 (LDS4) [MIM:614816]
36_PRO HIS ClinVar
chr1:218610765
rs387907278
Pathogenic - Loeys-Dietz syndrome 4 [MONDO:MONDO:0013897,MedGen:C3553762,OMIM:614816]
36_PRO THR ClinVar
chr1:218610764
rs2102630084
Pathogenic - Atrial septal defect 1 [MONDO:MONDO:0007172,MedGen:C1862389,OMIM:108800,Orphanet:1478]
39_TYR TER ClinVar
chr1:218610775
rs1553303357
Pathogenic - Familial thoracic aortic aneurysm and aortic dissection [MONDO:MONDO:0019625,MedGen:C4707243,OMIM:PS607086,Orphanet:91387]
45_ALA GLY 8.3kJPN
chr1:218610792
-
- 0.0001 -
65_TYR TER ClinVar
chr1:218614560
-
Likely pathogenic - Familial thoracic aortic aneurysm and aortic dissection [MONDO:MONDO:0019625,MedGen:C4707243,OMIM:PS607086,Orphanet:91387]
78_CYS TRP ClinVar
chr1:218614599
rs201129153
Likely pathogenic - not provided [MedGen:CN517202]
78_CYS PHE ClinVar
chr1:218614598
rs1553303745
Likely pathogenic - Familial thoracic aortic aneurysm and aortic dissection [MONDO:MONDO:0019625,MedGen:C4707243,OMIM:PS607086,Orphanet:91387]
79_VAL MET 8.3kJPN
chr1:218614600
rs376159002
- 0.0001 -
90_TYR CYS 8.3kJPN
chr1:218614634
rs1218609815
- 0.0001 -
94_LYS GLN 8.3kJPN
chr1:218614645
rs751650226
- 0.0008 -
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Reference

PiSite: a database of protein interaction sites using multiple binding states in the PDB, Miho Higurashi, Takashi Ishida and Kengo Kinoshita, Nucleic Acids Research 2009 37(Database issue):D360-D364

COPYRIGHTc2008-2019 Miho Higurashi, Takashi Ishida and Kengo Kinoshita. All rights reserved.