PDB ID | 1G0X
|
CHAIN | A |
---|---|---|---|
Protein name | LEUCOCYTE IMMUNOGLOBULIN-LIKE RECEPTOR-1 | ||
Uniprot Accession | Q8NHL6 | ||
The number of similar proteins | 12 | ||
The number of binding states | 4 | ||
The number of binding partners | 4 |
Unicolor (beige)
The number of binding partners
Group
Binding state |
Binding partners |
---|---|
1G0X (CHAIN: A) | |
1 | Monomeric state |
2 |
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3 |
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4 |
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Only interaction residues |
|
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|
Residue | AA | Source / dbSNP |
Clinical Significance |
Allele Frequency (> 0.0001) |
AlphaMissense pathogenicity |
Disease name | |
---|---|---|---|---|---|---|---|
2_HIS | LEU |
gnomAD chr19:55085771 rs1834697 |
- | 0.00542106 | 0.0733 | - | |
3_LEU | ILE |
gnomAD chr19:54803748 rs139099303 |
- | 0.00355955 | 0.0946 | - | |
3_LEU | HIS |
gnomAD chr19:55142957 rs201224544 |
- | 0.00103901 | 0.1675 | - | |
3_LEU | ILE |
8.3kJPN chr19:54803748 rs139099303 |
- | 0.3846 | 0.0946 | - | |
13_GLY | ASP |
8.3kJPN chr19:55085804 rs535758926 |
- | 0.0001 | 0.0962 | - | |
14_SER | ALA |
8.3kJPN chr19:54783892 - |
- | 0.0001 | 0.1121 | - | |
17_THR | ILE |
gnomAD chr19:54783882 rs75728057 |
- | 0.000159131 | 0.1572 | - | |
17_THR | PRO |
gnomAD chr19:55106177 rs142517538 |
- | 0.000617766 | 0.0858 | - | |
17_THR | ILE |
8.3kJPN chr19:54783882 rs75728057 |
- | 0.0112 | 0.1572 | - | |
17_THR | PRO |
8.3kJPN chr19:55106177 rs142517538 |
- | 0.0206 | 0.0858 | - | |
19_GLY | ARG |
8.3kJPN chr19:55106183 - |
- | 0.0001 | 0.3329 | - | |
20_SER | ILE |
8.3kJPN chr19:54783873 - |
- | 0.0001 | 0.1426 | - | |
27_GLN | TER |
8.3kJPN chr19:55143028 - |
- | 0.0001 | - | - | |
28_GLY | ARG |
8.3kJPN chr19:55085848 rs1290067922 |
- | 0.0004 | 0.134 | - | |
36_ARG | HIS |
gnomAD chr19:54783825 rs141797988 |
- | 0.000155165 | 0.0614 | - | |
36_ARG | HIS |
gnomAD chr19:55143056 rs774715846 |
- | 0.000115357 | 0.0614 | - | |
36_HIS | ARG |
8.3kJPN chr19:55085873 rs578056886 |
- | 0.0001 | - | - | |
36_ARG | GLY |
8.3kJPN chr19:55143055 rs749592435 |
- | 0.0004 | 0.2099 | - | |
36_ARG | HIS |
8.3kJPN chr19:55143056 rs774715846 |
- | 0.0001 | 0.0614 | - | |
38_TYR | HIS |
8.3kJPN chr19:54783820 - |
- | 0.0001 | 0.1679 | - | |
39_ARG | LYS |
gnomAD chr19:55085882 rs543523193 |
- | 0.000302235 | 0.1274 | - | |
40_GLU | GLY |
gnomAD chr19:55085885 rs146935882 |
- | 0.00133615 | 0.1775 | - | |
40_GLU | GLN |
8.3kJPN chr19:55106246 - |
- | 0.0001 | 0.1917 | - | |
45_LEU | PRO |
gnomAD chr19:54803621 rs144909639 |
- | 0.0215344 | - | - | |
45_LEU | PRO |
gnomAD chr19:55143083 rs1061679 |
- | 0.393352 | - | - | |
45_LEU | PRO |
8.3kJPN chr19:54803621 rs144909639 |
- | 0.6753 | - | - | |
46_TRP | CYS |
gnomAD chr19:55106266 rs200632994 |
- | 0.000318142 | 0.8 | - | |
47_ILE | PHE |
8.3kJPN chr19:54783793 - |
- | 0.0001 | 0.1705 | - | |
49_ARG | TRP |
gnomAD chr19:55143094 rs148931844 |
- | 0.000839073 | 0.0974 | - | |
49_ARG | GLN |
gnomAD chr19:55143095 rs202132279 |
- | 0.00198433 | 0.0875 | - | |
50_ILE | MET |
gnomAD chr19:55085916 rs543220734 |
- | 0.000274398 | 0.1538 | - | |
50_ILE | MET |
8.3kJPN chr19:55085916 rs543220734 |
- | 0.0001 | 0.1538 | - | |
51_ARG | TER |
8.3kJPN chr19:54783781 rs1366546333 |
- | 0.0002 | - | - | |
53_GLU | LYS |
8.3kJPN chr19:55085920 rs189159031 |
- | 0.0001 | 0.1211 | - | |
54_ILE | LEU |
8.3kJPN chr19:55106288 rs147848714 |
- | 0.0002 | - | - | |
54_LEU | ILE |
8.3kJPN chr19:55143109 rs750501464 |
- | 0.0003 | 0.1127 | - | |
60_PHE | LEU |
8.3kJPN chr19:54803577 rs200659644 |
- | 0.003 | 0.9479 | - | |
61_PRO | HIS |
gnomAD chr19:55106310 rs780771279 |
- | 0.000107372 | 0.1478 | - | |
62_ILE | THR |
gnomAD chr19:55106313 rs572192724 |
- | 0.000349945 | 0.813 | - | |
63_LEU | PRO |
gnomAD chr19:54803567 rs142556784 |
- | 0.0214898 | - | - | |
63_PRO | LEU |
gnomAD chr19:55143137 rs200880414 |
- | 0.000178953 | 0.1218 | - | |
63_LEU | PRO |
8.3kJPN chr19:54803567 rs142556784 |
- | 0.6751 | - | - | |
64_SER | CYS |
8.3kJPN chr19:55106319 - |
- | 0.0001 | 0.2365 | - | |
67_TRP | ARG |
gnomAD chr19:55085962 rs150302738 |
- | 0.000250527 | 0.225 | - | |
67_TRP | GLY |
8.3kJPN chr19:54803556 - |
- | 0.0001 | 0.0993 | - | |
68_GLU | LYS |
8.3kJPN chr19:54783730 rs1022457451 |
- | 0.0004 | 0.1809 | - | |
70_ALA | THR |
VAR_049888
rs12460501 |
LB/B | - | 0.1234 | - | |
70_ALA | THR |
gnomAD chr19:55143157 rs12460501 |
- | 0.196584 | 0.1234 | - | |
70_THR | ALA |
8.3kJPN chr19:55106336 rs766834992 |
- | 0.0001 | - | - | |
71_GLY | ALA |
gnomAD chr19:55143161 rs533376327 |
- | 0.000222717 | 0.4382 | - | |
71_GLY | GLU |
8.3kJPN chr19:55085975 - |
- | 0.0001 | 0.6377 | - | |
72_ARG | GLN |
gnomAD chr19:54803540 rs536143278 |
- | 0.000175753 | 0.0861 | - | |
72_ARG | TRP |
gnomAD chr19:55143163 rs147024305 |
- | 0.000286337 | 0.1157 | - | |
72_ARG | GLN |
gnomAD chr19:55143164 rs200251602 |
- | 0.000369864 | 0.0861 | - | |
72_ARG | TER |
8.3kJPN chr19:54783718 rs746435174 |
- | 0.0001 | - | - | |
73_TYR | CYS |
8.3kJPN chr19:55085981 - |
- | 0.0004 | 0.7921 | - | |
74_ARG | CYS |
8.3kJPN chr19:55106348 rs780861027 |
- | 0.0001 | 0.1441 | - | |
78_GLY | SER |
gnomAD chr19:55106360 rs201715627 |
- | 0.0031783 | 0.1107 | - | |
80_ASP | HIS |
gnomAD chr19:55143187 rs61738512 |
- | 0.00532668 | 0.0678 | - | |
81_ARG | HIS |
gnomAD chr19:54783693 rs73055442 |
- | 0.0296329 | - | - | |
84_LEU | ARG |
gnomAD chr19:54803504 rs6509862 |
- | 0.248584 | - | - | |
84_ARG | CYS |
gnomAD chr19:55143199 rs138410838 |
- | 0.00536037 | 0.1992 | - | |
84_LEU | ARG |
8.3kJPN chr19:54803504 rs6509862 |
- | 0.9468 | - | - | |
87_SER | ARG |
gnomAD chr19:55143208 rs10418552 |
- | 0.00536264 | 0.1701 | - | |
87_SER | THR |
gnomAD chr19:55143209 rs10419085 |
- | 0.00536366 | 0.1015 | - | |
87_SER | ASN |
8.3kJPN chr19:55143209 - |
- | 0.0001 | 0.091 | - | |
89_ASP | GLU |
gnomAD chr19:55106395 rs10417158 |
- | 0.00523404 | 0.2751 | - | |
94_VAL | MET |
8.3kJPN chr19:55106408 rs1361562599 |
- | 0.0001 | 0.1981 | - | |
95_VAL | MET |
gnomAD chr19:55086043 rs138441532 |
- | 0.00049387 | 0.1692 | - | |
98_ALA | THR |
8.3kJPN chr19:55086200 - |
- | 0.0001 | 0.113 | - | |
100_ILE | SER |
gnomAD chr19:55143395 rs370374304 |
- | 0.000179349 | 0.051 | - | |
100_SER | ILE |
8.3kJPN chr19:54803309 rs779366390 |
- | 0.0003 | - | - | |
106_ALA | VAL |
8.3kJPN chr19:55086225 - |
- | 0.0003 | 0.1621 | - | |
107_LEU | GLN |
8.3kJPN chr19:54803288 - |
- | 0.0003 | - | - | |
107_LEU | GLN |
8.3kJPN chr19:55086228 rs780646104 |
- | 0.0107 | - | - | |
108_PRO | SER |
8.3kJPN chr19:54803286 - |
- | 0.002 | 0.2369 | - | |
110_PRO | LEU |
8.3kJPN chr19:55086237 - |
- | 0.0001 | 0.1812 | - | |
111_VAL | MET |
8.3kJPN chr19:54783461 - |
- | 0.0001 | 0.1576 | - | |
113_THR | ALA |
8.3kJPN chr19:54783455 rs768931745 |
- | 0.005 | - | - | |
113_THR | ALA |
8.3kJPN chr19:54803271 - |
- | 0.0003 | - | - | |
113_THR | ALA |
8.3kJPN chr19:55086245 rs777235606 |
- | 0.011 | - | - | |
114_LEU | SER |
gnomAD chr19:55086249 rs45523736 |
- | 0.032222 | - | - | |
114_SER | LEU |
gnomAD chr19:55106616 rs138781448 |
- | 0.00121317 | 0.1091 | - | |
114_SER | THR |
8.3kJPN chr19:55086248 - |
- | 0.0001 | 0.0979 | - | |
116_GLY | ARG |
gnomAD chr19:54803262 rs150090129 |
- | 0.000239905 | 0.131 | - | |
116_GLY | GLU |
8.3kJPN chr19:54803261 rs751649447 |
- | 0.0003 | 0.1097 | - | |
116_GLY | GLU |
8.3kJPN chr19:55086255 rs780649717 |
- | 0.0112 | 0.1097 | - | |
116_GLY | ARG |
8.3kJPN chr19:55106621 - |
- | 0.0003 | 0.131 | - | |
117_ARG | THR |
8.3kJPN chr19:54783442 rs749531977 |
- | 0.0041 | - | - | |
118_VAL | MET |
8.3kJPN chr19:55106627 rs1288597511 |
- | 0.0001 | 0.179 | - | |
119_THR | ALA |
gnomAD chr19:55086263 rs75334515 |
- | 0.000318127 | - | - | |
119_ILE | THR |
gnomAD chr19:55143452 rs1061680 |
- | 0.35393 | - | - | |
120_ILE | LEU |
8.3kJPN chr19:54803250 rs75159993 |
- | 0.0003 | - | - | |
123_GLU | ASP |
8.3kJPN chr19:54783423 rs758035729 |
- | 0.0032 | - | - | |
123_GLU | GLY |
8.3kJPN chr19:54783424 rs751291818 |
- | 0.0033 | - | - | |
123_ASP | GLY |
8.3kJPN chr19:54803240 - |
- | 0.0003 | 0.1097 | - | |
123_VAL | GLY |
8.3kJPN chr19:55086276 rs571423648 |
- | 0.0112 | - | - | |
125_GLN | GLU |
8.3kJPN chr19:54803235 - |
- | 0.0003 | 0.0793 | - | |
126_VAL | LEU |
gnomAD chr19:54803232 rs141580607 |
- | 0.000209601 | 0.1419 | - | |
126_VAL | MET |
gnomAD chr19:55106651 rs150789645 |
- | 0.000405634 | 0.1478 | - | |
126_VAL | LEU |
8.3kJPN chr19:54803232 rs141580607 |
- | 0.0548 | 0.1419 | - | |
127_ALA | PRO |
8.3kJPN chr19:54783413 rs752410806 |
- | 0.0027 | 0.0913 | - | |
127_ALA | PRO |
8.3kJPN chr19:54803229 - |
- | 0.0003 | 0.0913 | - | |
127_ALA | PRO |
8.3kJPN chr19:55086287 rs754386274 |
- | 0.0107 | 0.0913 | - | |
128_PHE | SER |
8.3kJPN chr19:54783409 rs147946414 |
- | 0.0001 | 0.3086 | - | |
129_GLY | ASP |
8.3kJPN chr19:54783406 rs201825609 |
- | 0.003 | - | - | |
130_GLY | SER |
gnomAD chr19:55086296 rs73612414 |
- | 0.00380153 | 0.117 | - | |
130_SER | GLY |
gnomAD chr19:55106663 rs10417589 |
- | 0.106379 | - | - | |
130_SER | GLY |
8.3kJPN chr19:55106663 rs10417589 |
- | 0.0012 | - | - | |
132_SER | ILE |
gnomAD chr19:55143491 rs1061681 |
- | 0.391419 | - | - | |
136_GLU | VAL |
gnomAD chr19:54783385 rs144777644 |
- | 0.000636279 | 0.2094 | - | |
136_GLU | GLN |
8.3kJPN chr19:54783386 rs774796329 |
- | 0.0033 | 0.1903 | - | |
136_GLU | GLN |
8.3kJPN chr19:54803202 - |
- | 0.0003 | 0.1903 | - | |
136_GLU | GLN |
8.3kJPN chr19:55086314 rs201199710 |
- | 0.0087 | 0.1903 | - | |
137_GLY | GLU |
8.3kJPN chr19:54783382 rs763237443 |
- | 0.0035 | 0.1305 | - | |
137_GLY | GLU |
8.3kJPN chr19:54803198 - |
- | 0.0003 | 0.1305 | - | |
137_GLY | GLU |
8.3kJPN chr19:55086318 rs981943540 |
- | 0.0087 | 0.1305 | - | |
141_HIS | GLN |
gnomAD chr19:54803185 rs201902629 |
- | 0.000367911 | 0.1961 | - | |
141_HIS | TYR |
gnomAD chr19:55106696 rs75416770 |
- | 0.00308185 | 0.098 | - | |
141_HIS | TYR |
8.3kJPN chr19:55106696 rs75416770 |
- | 0.0517 | 0.098 | - | |
143_GLN | GLU |
8.3kJPN chr19:55143523 rs763628392 |
- | 0.0001 | 0.0903 | - | |
144_ARG | CYS |
gnomAD chr19:55086338 rs149722559 |
- | 0.0044498 | - | - | |
144_ARG | HIS |
gnomAD chr19:55086339 rs112235102 |
- | 0.000850962 | - | - | |
144_CYS | ARG |
gnomAD chr19:55143526 rs528992461 |
- | 0.000381743 | 0.078 | - | |
144_ARG | CYS |
8.3kJPN chr19:55086338 rs149722559 |
- | 0.007 | - | - | |
145_LEU | ARG |
gnomAD chr19:55106709 rs548810299 |
- | 0.000198829 | 0.0797 | - | |
148_HIS | GLN |
8.3kJPN chr19:55086352 rs759834040 |
- | 0.008 | - | - | |
148_GLN | HIS |
8.3kJPN chr19:55143540 rs749158954 |
- | 0.0003 | 0.1538 | - | |
149_SER | PRO |
8.3kJPN chr19:55086353 rs765734952 |
- | 0.008 | - | - | |
149_PRO | SER |
8.3kJPN chr19:55143541 rs768734027 |
- | 0.0003 | 0.0792 | - | |
152_ARG | HIS |
8.3kJPN chr19:54803153 rs771007024 |
- | 0.0003 | 0.0801 | - | |
154_SER | TRP |
gnomAD chr19:54783331 rs576220286 |
- | 0.000127629 | 0.073 | - | |
154_SER | TRP |
8.3kJPN chr19:54783331 rs576220286 |
- | 0.0016 | 0.073 | - | |
154_SER | ALA |
8.3kJPN chr19:54783332 rs765998984 |
- | 0.0011 | 0.0946 | - | |
154_TRP | GLY |
8.3kJPN chr19:55086368 rs780051526 |
- | 0.0079 | - | - | |
155_SER | PRO |
8.3kJPN chr19:54783329 rs555983101 |
- | 0.0001 | 0.2354 | - | |
156_ARG | GLN |
gnomAD chr19:54803141 rs147561158 |
- | 0.000496601 | 0.0946 | - | |
156_ARG | HIS |
8.3kJPN chr19:54783325 rs765314039 |
- | 0.0001 | 0.1145 | - | |
156_ARG | CYS |
8.3kJPN chr19:54783326 rs775954639 |
- | 0.0011 | 0.2283 | - | |
156_TRP | LEU |
8.3kJPN chr19:55086375 rs1480552730 |
- | 0.0001 | - | - | |
156_ARG | TRP |
8.3kJPN chr19:55106741 rs201483250 |
- | 0.0003 | 0.0878 | - | |
156_ARG | GLN |
8.3kJPN chr19:55106742 rs922288206 |
- | 0.0001 | 0.0946 | - | |
161_VAL | LEU |
8.3kJPN chr19:54783311 - |
- | 0.0001 | 0.2521 | - | |
164_VAL | MET |
gnomAD chr19:55086398 rs137946359 |
- | 0.000314148 | 0.2124 | - | |
164_VAL | MET |
gnomAD chr19:55106765 rs566667645 |
- | 0.000560725 | 0.2124 | - | |
164_VAL | MET |
8.3kJPN chr19:55106765 rs566667645 |
- | - | 0.2124 | - | |
166_PRO | ALA |
gnomAD chr19:55086404 rs754870024 |
- | 0.000135204 | 0.114 | - | |
166_PRO | LEU |
gnomAD chr19:55086405 rs74454618 |
- | 0.000210761 | 0.1353 | - | |
166_PRO | ARG |
8.3kJPN chr19:54783295 rs752949543 |
- | 0.0001 | 0.1528 | - | |
166_PRO | ALA |
8.3kJPN chr19:55086404 rs754870024 |
- | 0.0011 | 0.114 | - | |
166_PRO | LEU |
8.3kJPN chr19:55106772 rs202039753 |
- | 0.0001 | 0.1353 | - | |
167_ASN | SER |
gnomAD chr19:54783292 rs373341013 |
- | 0.000187536 | - | - | |
167_ASN | SER |
8.3kJPN chr19:54783292 rs373341013 |
- | 0.001 | - | - | |
168_ARG | HIS |
gnomAD chr19:55106778 rs10418391 |
- | 0.0655032 | 0.0948 | - | |
168_ARG | HIS |
8.3kJPN chr19:55086411 rs567633305 |
- | - | 0.0948 | - | |
168_ARG | CYS |
8.3kJPN chr19:55106777 rs141328341 |
- | 0.0001 | 0.1987 | - | |
168_ARG | HIS |
8.3kJPN chr19:55106778 rs10418391 |
- | 0.0001 | 0.0948 | - | |
171_SER | TRP |
gnomAD chr19:54783280 rs771929420 |
- | 0.000127253 | - | - | |
171_SER | TRP |
gnomAD chr19:55106787 rs151320443 |
- | 0.000696052 | - | - | |
171_SER | TRP |
8.3kJPN chr19:55086420 rs770183945 |
- | 0.0001 | - | - | |
171_SER | TER |
8.3kJPN chr19:55106787 rs151320443 |
- | - | - | - | |
171_TRP | TER |
8.3kJPN chr19:55143609 rs373103118 |
- | 0.0058 | - | - | |
172_HIS | TYR |
8.3kJPN chr19:54783278 rs774001588 |
- | 0.0005 | - | - | |
175_TYR | CYS |
8.3kJPN chr19:54783268 - |
- | 0.0001 | 0.3254 | - | |
176_GLY | ALA |
8.3kJPN chr19:54803081 rs773860990 |
- | 0.0004 | - | - | |
176_ALA | GLY |
8.3kJPN chr19:55086435 rs138740762 |
- | 0.0085 | 0.0642 | - | |
176_ALA | GLY |
8.3kJPN chr19:55106802 rs1339989721 |
- | 0.0052 | 0.0642 | - | |
179_SER | LEU |
gnomAD chr19:55143632 rs200423268 |
- | 0.000349981 | 0.1074 | - | |
179_LEU | SER |
8.3kJPN chr19:54783256 rs374882341 |
- | 0.0005 | - | - | |
179_SER | LEU |
8.3kJPN chr19:55143632 rs200423268 |
- | 0.0028 | 0.1074 | - | |
180_ARG | HIS |
gnomAD chr19:54803069 rs147951028 |
- | 0.0213833 | - | - | |
180_ASN | SER |
8.3kJPN chr19:54783253 rs1189729658 |
- | 0.0004 | 0.0665 | - | |
180_ARG | HIS |
8.3kJPN chr19:54803069 rs147951028 |
- | 0.6756 | - | - | |
180_ASN | SER |
8.3kJPN chr19:55086447 rs150674530 |
- | 0.0085 | 0.0665 | - | |
180_ASN | SER |
8.3kJPN chr19:55106814 rs776711765 |
- | 0.0053 | 0.0665 | - | |
181_SER | THR |
8.3kJPN chr19:55106816 - |
- | 0.0005 | 0.0978 | - | |
183_TYR | CYS |
gnomAD chr19:54783244 rs201592158 |
- | 0.00018299 | 0.22 | - | |
183_TYR | HIS |
gnomAD chr19:55086455 rs138719779 |
- | 0.00196562 | 0.2077 | - | |
183_HIS | TYR |
gnomAD chr19:55106822 rs150400481 |
- | 0.00038646 | - | - | |
183_TYR | HIS |
8.3kJPN chr19:55086455 rs138719779 |
- | 0.0001 | 0.2077 | - | |
183_HIS | TYR |
8.3kJPN chr19:55106822 rs150400481 |
- | 0.0054 | - | - | |
185_TRP | TER |
8.3kJPN chr19:55086463 rs201934047 |
- | 0.0033 | - | - | |
186_SER | PRO |
8.3kJPN chr19:55143652 - |
- | 0.0002 | 0.8127 | - | |
187_LEU | PRO |
gnomAD chr19:55143656 rs200859502 |
- | 0.00019124 | 0.1404 | - | |
187_SER | LEU |
8.3kJPN chr19:54783232 rs200236517 |
- | 0.0002 | - | - | |
187_SER | PRO |
8.3kJPN chr19:54783233 rs201233860 |
- | 0.0002 | - | - | |
187_LEU | VAL |
8.3kJPN chr19:55143655 - |
- | 0.0001 | 0.1026 | - | |
190_ASP | GLU |
8.3kJPN chr19:55086478 rs752284633 |
- | 0.0001 | 0.2529 | - | |
193_GLY | GLU |
gnomAD chr19:54803030 rs142529349 |
- | 0.0216022 | - | - | |
193_GLY | GLU |
8.3kJPN chr19:54803030 rs142529349 |
- | 0.6758 | - | - | |
197_LEU | PRO |
8.3kJPN chr19:55106865 rs373854 |
- | 0.3151 | 0.0423 | - |