PDB ID 1BVN     CHAIN P
Protein name PROTEIN (ALPHA-AMYLASE)
Uniprot Accession P00690
The number of similar proteins 17
The number of binding states 5
The number of binding partners 4

Coloring

Unicolor (beige)

The number of binding partners

Group

Binding
state
Binding partners
1BVN (CHAIN: P)
1 P01092  
2 Monomeric state
3 4X0N  
4 1KXT  
5 P02873  

Downdload

Format:

Molecule viewer

#binding
partners
  4
  3
  2
  1
  0

Sequence information

1   QYAPQTQSGR   TDIVHLFEWR   WVDIALECER   YLGPKGFGGV   QVSPPNENVV   50
51   VTNPSRPWWE   RYQPVSYKLC   TRSGNENEFR   DMVTRCNNVG   VRIYVDAVIN   100
101   HMCGSGAAAG   TGTTCGSYCN   PGSREFPAVP   YSAWDFNDGK   CKTASGGIES   150
151   YNDPYQVRDC   QLVGLLDLAL   EKDYVRSMIA   DYLNKLIDIG   VAGFRLDASK   200
201   HMWPGDIKAV   LDKLHNLNTN   WFPAGSRPFI   FQEVIDLGGE   AISSSEYFGN   250
251   GRVTEFKYGA   KLGTVVRKWS   GEKMSYLKNW   GEGWGFMPSD   RALVFVDNHD   300
301   NQRGHGAGGS   SILTFWDARL   YKVAVGFMLA   HPYGFTRVMS   SYRWARNFVN   350
351   GEDVNDWIGP   PNNNGVIKEV   TINADTTCGN   DWVCEHRWRE   IRNMVWFRNV   400
401   VDGQPFANWW   DNGSNQVAFG   RGNRGFIVFN   NDDWQLSSTL   QTGLPGGTYC   450
451   NVISGDKVGN   SCTGIKVYVS   SDGTAQFSIS   NSAQDPFIAI   HAESKL   500

Variants

Residue AA Source dbSNP Clinical
Significance
Allele
Frequency
(4.7kJPN)
Disease name
20_ARG TER 4.7kJPN
chr1:104114327
rs761465185
- 0.0001 -
20_ARG GLN 4.7kJPN
chr1:104160166
-
- 0.0002 -
22_VAL GLY 4.7kJPN
chr1:104114334
-
- 0.0001 -
23_ASP ASN 4.7kJPN
chr1:104160174
rs754651162
- 0.0001 -
27_GLU GLN 4.7kJPN
chr1:104114348
-
- 0.0001 -
30_ARG GLN 4.7kJPN
chr1:104114358
rs558718174
- 0.0001 -
30_ARG GLN 4.7kJPN
chr1:104160196
rs148507365
- 0.0001 -
30_ARG TER 4.7kJPN
chr1:104293224
rs1350376061
- 0.0001 -
31_TYR CYS 4.7kJPN
chr1:104160199
-
- 0.0001 -
33_ALA THR 4.7kJPN
chr1:104160204
rs79714993
- 0.0001 -
35_LYS GLN 4.7kJPN
chr1:104160210
rs773791633
- 0.0002 -
41_GLN HIS 4.7kJPN
chr1:104114392
-
- 0.0001 -
52_HIS TYR 4.7kJPN
chr1:104114762
rs763891745
- 0.0001 -
69_LEU PHE 4.7kJPN
chr1:104114815
rs1226144068
- 0.0001 -
70_CYS ARG 4.7kJPN
chr1:104114816
-
- 0.0001 -
80_ARG SER 4.7kJPN
chr1:104160692
rs201971373
- 0.0094 -
84_THR ASN 4.7kJPN
chr1:104160703
rs143462563
- 0.0017 -
89_VAL ILE 4.7kJPN
chr1:104114873
rs766776510
- 0.0003 -
92_ARG CYS 4.7kJPN
chr1:104115688
rs750106406
- 0.0001 -
92_ARG CYS 4.7kJPN
chr1:104161536
rs770671951
- 0.0003 -
103_SER CYS 4.7kJPN
chr1:104115722
rs4098273
- 0.0001 -
103_CYS SER 4.7kJPN
chr1:104161570
rs1327917758
- 0.0001 -
105_ASN ILE 4.7kJPN
chr1:104161576
-
- 0.0001 -
107_VAL MET 4.7kJPN
chr1:104115733
-
- 0.0001 -
108_SER ARG 4.7kJPN
chr1:104161586
rs1390018344
- 0.0001 -
113_SER ILE 4.7kJPN
chr1:104161600
-
- 0.0001 -
123_SER ILE 4.7kJPN
chr1:104115782
-
- 0.0001 -
123_SER ASN 4.7kJPN
chr1:104161630
rs560183547
- 0.0008 -
148_ILE VAL 4.7kJPN
chr1:104161704
rs1319186352
- 0.0001 -
159_ASP TYR 4.7kJPN
chr1:104162182
-
- 0.0001 -
159_ASP GLU 4.7kJPN
chr1:104162184
rs748793710
- 0.0041 -
161_ARG HIS 4.7kJPN
chr1:104162189
rs200283230
- 0.0001 -
176_ARG CYS 4.7kJPN
chr1:104162233
rs763068700
- 0.0002 -
182_TYR HIS 4.7kJPN
chr1:104116405
rs1248882715
- 0.0001 -
189_ILE THR 4.7kJPN
chr1:104162273
rs1247561853
- 0.0001 -
196_LEU ILE 4.7kJPN
chr1:104162293
rs549614263
- 0.0001 -
201_HIS LEU 4.7kJPN
chr1:104162309
rs200197467
- 0.0007 -
208_LYS GLN 4.7kJPN
chr1:104116483
-
- 0.0004 -
217_LEU VAL 4.7kJPN
chr1:104162356
-
- 0.0001 -
222_PHE TYR 4.7kJPN
chr1:104116526
-
- 0.0001 -
238_GLY VAL 4.7kJPN
chr1:104163186
rs532919677
- 0.0004 -
244_SER ASN 4.7kJPN
chr1:104116913
-
- 0.0001 -
263_GLY SER 4.7kJPN
chr1:104116969
rs764566458
- 0.0001 -
263_GLY SER 4.7kJPN
chr1:104163260
rs746422923
- 0.0001 -
265_VAL ILE 4.7kJPN
chr1:104163266
rs61814453
- 0.1126 -
267_ARG CYS 4.7kJPN
chr1:104116981
rs368462934
- 0.0001 -
267_ARG HIS 4.7kJPN
chr1:104163273
rs200554552
- 0.0268 -
278_LYS GLU 4.7kJPN
chr1:104117014
-
- 0.0001 -
290_ASP GLU 4.7kJPN
chr1:104203018
-
- 0.0001 -
292_ALA VAL 4.7kJPN
chr1:104234191
rs201627077
- 0.0161 -
293_LEU PHE 4.7kJPN
chr1:104234189
rs757768134
- 0.0007 -
297_ASP ASN 4.7kJPN
chr1:104234177
-
- 0.0001 -
300_ASP GLU 4.7kJPN
chr1:104234166
-
- 0.0001 -
300_ASP VAL 4.7kJPN
chr1:104234167
-
- 0.0002 -
301_ASN SER 4.7kJPN
chr1:104234164
rs763143822
- 0.0004 -
303_ARG TER 4.7kJPN
chr1:104297194
rs752371105
- 0.0012 -
306_GLY TRP 4.7kJPN
chr1:104117927
rs1263496927
- 0.0005 -
307_ALA THR 4.7kJPN
chr1:104203067
rs755582791
- 0.0011 -
307_ALA THR 4.7kJPN
chr1:104234147
rs140294416
- 0.0001 -
309_GLY GLU 4.7kJPN
chr1:104297213
rs775987541
- 0.0006 -
310_ALA VAL 4.7kJPN
chr1:104203077
-
- 0.0002 -
310_ALA VAL 4.7kJPN
chr1:104234137
rs545069888
- 0.0001 -
311_SER CYS 4.7kJPN
chr1:104234134
-
- 0.0001 -
313_LEU ARG 4.7kJPN
chr1:104234128
rs758357562
- 0.0013 -
323_MET ILE 4.7kJPN
chr1:104297349
rs757607457
- 0.0001 -
337_ARG TER 4.7kJPN
chr1:104118115
rs760449208
- 0.0001 -
337_ARG TER 4.7kJPN
chr1:104233963
rs199554865
- 0.0006 -
343_ARG HIS 4.7kJPN
chr1:104203270
rs747319728
- 0.0001 -
343_ARG CYS 4.7kJPN
chr1:104297407
rs779804656
- 0.0002 -
343_ARG HIS 4.7kJPN
chr1:104297408
rs748837763
- 0.0001 -
346_ARG THR 4.7kJPN
chr1:104118143
rs1171955418
- 0.0002 -
352_ASN SER 4.7kJPN
chr1:104118161
rs572909605
- 0.0001 -
361_PRO THR 4.7kJPN
chr1:104166512
-
- 0.0001 -
367_ILE MET 4.7kJPN
chr1:104120156
rs181502776
- 0.0023 -
372_ILE MET 4.7kJPN
chr1:104166547
rs760606304
- 0.017 -
381_ASP GLU 4.7kJPN
chr1:104166574
-
- 0.0002 -
382_TRP CYS 4.7kJPN
chr1:104120201
-
- 0.0004 -
382_TRP CYS 4.7kJPN
chr1:104166577
-
- 0.0013 -
387_ARG GLY 4.7kJPN
chr1:104166590
rs1832269
- 0.0001 -
389_ARG HIS 4.7kJPN
chr1:104166597
rs770294712
- 0.0002 -
389_ARG CYS 4.7kJPN
chr1:104205387
rs1240333808
- 0.0006 -
391_ILE VAL 4.7kJPN
chr1:104205393
rs1178161506
- 0.0001 -
394_MET ILE 4.7kJPN
chr1:104120348
-
- 0.0001 -
398_ARG HIS 4.7kJPN
chr1:104166735
rs1274019006
- 0.0001 -
404_GLN HIS 4.7kJPN
chr1:104166754
-
- 0.0001 -
422_GLY ARG 4.7kJPN
chr1:104205596
-
- 0.0004 -
433_ASP TYR 4.7kJPN
chr1:104166839
rs1231626541
- 0.0001 -
449_TYR ASN 4.7kJPN
chr1:104206996
-
- 0.0004 -
469_VAL ALA 4.7kJPN
chr1:104207057
-
- 0.0005 -
490_ILE THR 4.7kJPN
chr1:104207120
-
- 0.0005 -
(Powered by wupsivus)

Reference

PiSite: a database of protein interaction sites using multiple binding states in the PDB, Miho Higurashi, Takashi Ishida and Kengo Kinoshita, Nucleic Acids Research 2009 37(Database issue):D360-D364

COPYRIGHTc2008-2019 Miho Higurashi, Takashi Ishida and Kengo Kinoshita. All rights reserved.