PDB ID 1IW7     CHAIN F
Protein name RNA polymerase sigma-70 subunit
GenBank ID 4239959
The number of similar proteins 70
The number of binding states 6
The number of binding partners 6

Coloring

Unicolor (beige)

The number of binding partners

Group

Binding
state		 Binding partners
1IW7 (CHAIN: F)
1 Q8RQE8   Q8RQE9  
2 Monomeric state
3 Q8RQE8   Q8RQE9   A7XX65  
4 Q8RQE8   Q8RQE9   Q53W63  
5 Q9KWU6   Q9KWU7   H9ZP94  
6 Q8RQE8   Q8RQE9   A7XXA7   A7XX65  

Downdload

Format:

Molecule viewer


Only interaction residues
#binding
partners
  4
  3
  2
  1
  0

Sequence information

1   MKKSKRKNAQ   AQEAQETEVL   VQEEAEELPE   FPEGEPDPDL   EDPDLALEDD   50
51   LLDLPEEGEG   LDLEEEEEDL   PIPKISTSDP   VRQYLHEIGQ   VPLLTLEEEV   100
101   ELARKVEEGM   EAIKKLSEIT   GLDPDLIREV   VRAKILGSAR   VRHIPGLKET   150
151   LDPKTVEEID   QKLKSLPKEH   KRYLHIAREG   EAARQHLIEA   NLRLVVSIAK   200
201   KYTGRGLSFL   DLIQEGNQGL   IRAVEKFEYK   RRFKFSTYAT   WWIRQAINRA   250
251   IADQARTIRI   PVHMVETINK   LSRTARQLQQ   ELGREPTYEE   IAEAMGPGWD   300
301   AKRVEETLKI   AQEPVSLETP   IGDEKDSFYG   DFIPDEHLPS   PVDAATQSLL   350
351   SEELEKALSK   LSEREAMVLK   LRKGLIDGRE   HTLEEVGAFF   GVTRERIRQI   400
401   ENKALRKLKY   HESRTRKLRD   FLD       450

Variants

Residue AA Source /
dbSNP		 Clinical
Significance
 Allele
Frequency
(> 0.0001)		 AlphaMissense
pathogenicity		 Disease name
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Reference

PiSite: a database of protein interaction sites using multiple binding states in the PDB, Miho Higurashi, Takashi Ishida and Kengo Kinoshita, Nucleic Acids Research 2009 37(Database issue):D360-D364

COPYRIGHTc2008-2019 Miho Higurashi, Takashi Ishida and Kengo Kinoshita. All rights reserved.