PDB ID 4IFD     CHAIN E
Protein name Exosome complex component RRP42
Uniprot Accession Q12277
The number of similar proteins 8
The number of binding states 4
The number of binding partners 6

Coloring

Unicolor (beige)

The number of binding partners

Group

Binding
state		 Binding partners
4IFD (CHAIN: E)
1 P38792   P48240   P46948   Q08162  
2 P38792   P48240   P46948  
3 P53859   P38792   P48240   P46948   Q08162  
4 P53859   P38792   P48240   P25359   P46948  

Downdload

Format:

Molecule viewer


Only interaction residues
#binding
partners
  2
  1
  0

Sequence information

1   GHMSLSVAEK   SYLYDSLAST   PSIRPDGRLP   HQFRPIEIFT   DFLPSSNGSS   50
51   RIIASDGSEC   IVSIKSKVVD   HHVENELLQV   DVDIAGQRDD   ALVVETITSL   100
101   LNKVLKSGSG   VDSSKLQLTK   KYSFKIFVDV   LVISSHSHPI   SLISFAIYSA   150
151   LNSTYLPKLI   SAFDDLEVEE   LPTFHDYDMV   KLDINPPLVF   ILAVVGNNML   200
201   LDPAANESEV   ANNGLIISWS   NGKITSPIRS   VALNDSNVKS   FKPHLLKQGL   250
251   AMVEKYAPDV   VRSLENL         300

Variants

Residue AA Source /
dbSNP		 Clinical
Significance
 Allele
Frequency
(> 0.0001)		 AlphaMissense
pathogenicity		 Disease name
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Reference

PiSite: a database of protein interaction sites using multiple binding states in the PDB, Miho Higurashi, Takashi Ishida and Kengo Kinoshita, Nucleic Acids Research 2009 37(Database issue):D360-D364

COPYRIGHTc2008-2019 Miho Higurashi, Takashi Ishida and Kengo Kinoshita. All rights reserved.