PDB ID 4IFD     CHAIN C
Protein name Exosome complex component RRP43
Uniprot Accession P25359
The number of similar proteins 8
The number of binding states 6
The number of binding partners 9

Coloring

Unicolor (beige)

The number of binding partners

Group

Binding
state		 Binding partners
4IFD (CHAIN: C)
1 P53859   P48240   P53256   Q05636   Q08162   Q12149  
2 P53859   P48240   P53256   Q12149  
3 Q08491   P53859   P48240   P53256   Q05636  
4 P53859   P48240   P53256   Q05636   Q12149  
5 P53859   P48240   P53256   Q05636   Q12277  
6 P53859   P48240   P53256   Q05636   Q12149   Q08162  

Downdload

Format:

Molecule viewer


Only interaction residues
#binding
partners
  5
  4
  3
  2
  1
  0

Sequence information

1   AESTTLETIE   IHPITFPPEV   LARISPELSL   QRHLSLGIRP   CLRKYEEFRD   50
51   VAIENNTLSR   YADAGNIDTK   NNILGSNVLK   SGKTIVITSI   TGGIIEETSA   100
101   SIKDLDDFGE   EELFEVTKEE   DIIANYASVY   PVVEVERGRV   GACTDEEMTI   150
151   SQKLHDSILH   SRILPKKALK   VKAGVRSANE   DGTFSVLYPD   ELEDDTLNET   200
201   NLKMKRKWSY   VLYAKIVVLS   RTGPVFDLCW   NSLMYALQSV   KLPRAFIDER   250
251   ASDLRMTIRT   RGRSATIRET   YEIICDQTKS   VPLMINAKNI   AFASNYGIVE   300
301   LDPECQLQNS   DNSEEEEVDI   DMDKLNTVLI   ADLDTEAEET   SIHSTISILA   350
351   APSGNYKQLT   LMGGGAKITP   EMIKRSLLLS   RVRADDLSTR   FNI   400

Variants

Residue AA Source /
dbSNP		 Clinical
Significance
 Allele
Frequency
(> 0.0001)		 AlphaMissense
pathogenicity		 Disease name
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Reference

PiSite: a database of protein interaction sites using multiple binding states in the PDB, Miho Higurashi, Takashi Ishida and Kengo Kinoshita, Nucleic Acids Research 2009 37(Database issue):D360-D364

COPYRIGHTc2008-2019 Miho Higurashi, Takashi Ishida and Kengo Kinoshita. All rights reserved.