PDB ID 5WAI     CHAIN B
Protein name Polycomb protein SUZ12
Uniprot Accession Q15022
The number of similar proteins 4
The number of binding states 4
The number of binding partners 4

Coloring

Unicolor (beige)

The number of binding partners

Group

Binding
state
Binding partners
5WAI (CHAIN: B)
1 Q09028   Q6ZN18  
2 Q09028  
3 Q5T6S3   Q09028  
4 A6NHQ4   Q5T6S3   Q09028  

Downdload

Format:

Molecule viewer


Only interaction residues
#binding
partners
  2
  1
  0

Sequence information

1   MEHVQADHEL   FLQAFEKPTQ   IYRFLRTRNL   IAPIFLHRTL   TYMSHRNSRT   50
51   NIKRKTFKVD   DMLSKVEKMK   GEQESHSLSA   HLQLTFTGFF   HKNDKPSPNS   100
101   ENEQNSVTLE   VLLVKVCHKK   RKDVSCPIRQ   VPTGKKQVPL   NPDLNQTKPG   150
151   NFPSLAVSSN   EFEPSNSHMV   KSYSLLFRVT   RPGRREFNGM   INGETNENID   200
201   VNEELPARRK   RNREDGEKTF   VAQMTVFDKN   RRLQLLDGEY   EVAMQEMEEC   250
251   PISKKRATWE   TILDGKRLPP   FETFSQGPTL   QFTLRWTGET   NDKSTAPIAK   300
301   PLATRNSESL   HQENKPGSVK   PTQTIAVKES   LTTDLQTRKE   KDTPNENRQK   350
351   LRIFYQFLYN   NNTRQQTEAR   DDLHCPWCTL   NCRKLYSLLK   HLKLCHSRFI   400
401   FNYVYHPKGA   RIDVSINECY   DGSYAGNPQD   IHRQPGFAFS   RNGPVKRTPI   450
451   THILVCRPKR   TKASMSEFLE   WSHPQFEK       500

Variants

Residue AA Source /
dbSNP
Clinical
Significance
Allele
Frequency
(> 0.0001)
AlphaMissense
pathogenicity
Disease name
120_HIS LEU 8.3kJPN
chr17:30267478
-
- 0.0001 0.5626 -
121_ARG TER ClinVar
chr17:30267480
rs750383066
Pathogenic/Likely pathogenic - - Inborn genetic diseases|Imagawa-Matsumoto syndrome|not provided [MeSH:D030342,MedGen:C0950123|MONDO:MONDO:0032916,MedGen:C5394073,OMIM:618786,Orphanet:659463|MedGen:C3661900]
216_ASN ILE VAR_028100
rs17339444
LB/B - 0.9844 -
316_GLU ALA 8.3kJPN
chr17:30310047
-
- 0.0001 0.9635 -
317_VAL ALA 8.3kJPN
chr17:30310050
-
- 0.0001 0.9561 -
352_GLY ARG 8.3kJPN
chr17:30315369
-
- 0.0001 0.9953 -
423_ARG TER ClinVar
chr17:30320326
rs2508677290
Likely pathogenic - - Imagawa-Matsumoto syndrome [MONDO:MONDO:0032916,MedGen:C5394073,OMIM:618786,Orphanet:659463]
475_ILE PHE 8.3kJPN
chr17:30321013
-
- 0.0001 0.9258 -
535_ARG GLN VAR_083817
rs1909934091
US - 0.9556 Imagawa-Matsumoto syndrome (IMMAS) [MIM:618786]
535_ARG TER ClinVar
chr17:30322590
rs2508684640
Likely pathogenic - - Imagawa-Matsumoto syndrome [MONDO:MONDO:0032916,MedGen:C5394073,OMIM:618786,Orphanet:659463]
544_LEU PHE 8.3kJPN
chr17:30322617
-
- 0.0001 0.9779 -
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Reference

PiSite: a database of protein interaction sites using multiple binding states in the PDB, Miho Higurashi, Takashi Ishida and Kengo Kinoshita, Nucleic Acids Research 2009 37(Database issue):D360-D364

COPYRIGHTc2008-2019 Miho Higurashi, Takashi Ishida and Kengo Kinoshita. All rights reserved.