PDB ID 1BE3     CHAIN B
Protein name CYTOCHROME BC1 COMPLEX
Uniprot Accession P23004
The number of similar proteins 40
The number of binding states 5
The number of binding partners 5

Coloring

Unicolor (beige)

The number of binding partners

Group

Binding
state
Binding partners
1BE3 (CHAIN: B)
1 P31800   P13272  
2 P31800  
3 P13272   P31800  
4 P23004   P31800   P13272   P00129  
5 P23004   P13272   P31800   P00129  

Downdload

Format:

Molecule viewer


Only interaction residues
#binding
partners
  3
  2
  1
  0

Sequence information

1   SLKVAPKVKA   TEAPAGVPPH   PQDLEFTRLP   NGLVIASLEN   YAPASRIGLF   50
51   IKAGSRYENS   NNLGTSHLLR   LASSLTTKGA   SSFKITRGIE   AVGGKLSVTS   100
101   TRENMAYTVE   CLRDDVDILM   EFLLNVTTAP   EFRRWEVAAL   QPQLRIDKAV   150
151   ALQNPQAHVI   ENLHAAAYRN   ALANSLYCPD   YRIGKVTPVE   LHDYVQNHFT   200
201   SARMALIGLG   VSHPVLKQVA   EQFLNIRGGL   GLSGAKAKYH   GGEIREQNGD   250
251   SLVHAALVAE   SAAIGSAEAN   AFSVLQHVLG   AGPHVKRGSN   ATSSLYQAVA   300
301   KGVHQPFDVS   AFNASYSDSG   LFGFYTISQA   ASAGDVIKAA   YNQVKTIAQG   350
351   NLSNPDVQAA   KNKLKAGYLM   SVESSEGFLD   EVGSQALAAG   SYTPPSTVLQ   400
401   QIDAVADADV   INAAKKFVSG   RKSMAASGNL   GHTPFIDEL     450

Variants

Residue AA Source /
dbSNP
Clinical
Significance
Allele
Frequency
(> 0.0001)
AlphaMissense
pathogenicity
Disease name
52_LYS GLN 8.3kJPN
chr16:21968816
-
- 0.0001 - -
62_ASN SER 8.3kJPN
chr16:21968847
rs775768534
- 0.0001 - -
70_ARG HIS 8.3kJPN
chr16:21968871
rs371099781
- 0.0001 - -
94_GLY ASP ClinVar
chr16:21969911
rs2141927529
Pathogenic - - Mitochondrial complex III deficiency nuclear type 5 [MONDO:MONDO:0014066,MedGen:C3554608,OMIM:615160]
106_ALA VAL 8.3kJPN
chr16:21973807
-
- 0.0002 - -
120_MET ILE 8.3kJPN
chr16:21974094
rs898449154
- 0.0001 - -
134_ARG SER gnomAD
chr16:21974134
rs2228473
- 0.00606654 - -
134_ARG HIS gnomAD
chr16:21974135
rs781307417
- 0.000175147 - -
144_LEU ILE 8.3kJPN
chr16:21974164
-
- 0.0001 - -
155_PRO LEU 8.3kJPN
chr16:21974198
rs1158265207
- 0.0001 - -
165_ALA VAL 8.3kJPN
chr16:21976750
rs139348570
- 0.0001 - -
169_ARG TRP ClinVar
chr16:21976761
rs374661051
Pathogenic/Likely pathogenic - - Mitochondrial complex III deficiency nuclear type 5|not provided [MONDO:MONDO:0014066,MedGen:C3554608,OMIM:615160|MedGen:C3661900]
169_ARG GLN gnomAD
chr16:21976762
rs4850
- 0.039302 - -
183_ILE PHE 8.3kJPN
chr16:21976803
-
- 0.0001 - -
195_VAL ALA 8.3kJPN
chr16:21979962
-
- 0.0001 - -
208_GLY ALA ClinVar
chr16:21980001
rs1898386320
Pathogenic - - Mitochondrial complex III deficiency nuclear type 5 [MONDO:MONDO:0014066,MedGen:C3554608,OMIM:615160]
210_GLY ASP 8.3kJPN
chr16:21982846
-
- 0.0001 - -
225_ASN SER 8.3kJPN
chr16:21982891
-
- 0.0003 - -
240_ARG HIS gnomAD
chr16:21982936
rs11863893
- 0.0150379 - -
245_ARG GLN 8.3kJPN
chr16:21983253
rs780855199
- 0.0002 - -
259_ALA THR 8.3kJPN
chr16:21983294
rs1324070596
- 0.0001 - -
281_ALA GLY 8.3kJPN
chr16:21983361
-
- 0.0001 - -
304_GLN PRO gnomAD
chr16:21983430
rs146974535
- 0.00259901 - -
305_GLN PRO 8.3kJPN
chr16:21983433
-
- 0.0001 - -
329_GLN ARG gnomAD
chr16:21985278
rs773330878
- 0.000126147 - -
356_ASP ASN 8.3kJPN
chr16:21987548
-
- 0.0001 - -
364_LEU VAL 8.3kJPN
chr16:21991875
-
- 0.0001 - -
368_TYR CYS gnomAD
chr16:21991888
rs139312246
- 0.000135333 - -
368_TYR CYS 8.3kJPN
chr16:21991888
rs139312246
- 0.0167 - -
388_VAL ILE 8.3kJPN
chr16:21991947
rs1233348558
- 0.0002 - -
403_ASP GLU 8.3kJPN
chr16:21991994
-
- 0.0001 - -
405_VAL MET 8.3kJPN
chr16:21991998
rs748748050
- 0.0012 - -
(Powered by wupsivus)

Reference

PiSite: a database of protein interaction sites using multiple binding states in the PDB, Miho Higurashi, Takashi Ishida and Kengo Kinoshita, Nucleic Acids Research 2009 37(Database issue):D360-D364

COPYRIGHTc2008-2019 Miho Higurashi, Takashi Ishida and Kengo Kinoshita. All rights reserved.