PDB ID 5JDS     CHAIN A
Protein name Programmed cell death 1 ligand 1
Uniprot Accession Q9NZQ7
The number of similar proteins 73
The number of binding states 10
The number of binding partners 5

Coloring

Unicolor (beige)

The number of binding partners

Group

Binding
state		 Binding partners
5JDS (CHAIN: A)
1 5JDS  
2 Monomeric state
3 Q9NZQ7  
4 Q15116  
5 7SJQ  
6 Q9NZQ7   Q9NZQ7  
7 5X8M   5X8M  
8 5X8L   5X8L  
9 Q9NZQ7   Q9NZQ7   Q9NZQ7  
10 Q9NZQ7   Q9NZQ7   Q9NZQ7   Q9NZQ7  

Downdload

Format:

Molecule viewer


Only interaction residues
#binding
partners
  5
  4
  3
  2
  1
  0

Sequence information

1   MAFTVTVPKD   LYVVEYGSNM   TIECKFPVEK   QLDLAALIVY   WEMEDKNIIQ   50
51   FVHGEEDLKV   QHSSYRQRAR   LLKDQLSLGN   AALQITDVKL   QDAGVYRCMI   100
101   SYGGADYKRI   TVKVNALEHH   HHHH       150

Variants

Residue AA Source /
dbSNP		 Clinical
Significance
 Allele
Frequency
(> 0.0001)		 AlphaMissense
pathogenicity		 Disease name
22_THR MET gnomAD
chr9:5457091
rs143235887
- 0.000100493 0.0977 -
31_GLU GLN 8.3kJPN
chr9:5457117
rs373692552
- 0.0001 0.1204 -
113_ARG HIS 8.3kJPN
chr9:5457364
rs1272843564
- 0.0001 0.1009 -
(Powered by wupsivus)

Reference

PiSite: a database of protein interaction sites using multiple binding states in the PDB, Miho Higurashi, Takashi Ishida and Kengo Kinoshita, Nucleic Acids Research 2009 37(Database issue):D360-D364

COPYRIGHTc2008-2019 Miho Higurashi, Takashi Ishida and Kengo Kinoshita. All rights reserved.