PDB ID 3VBF     CHAIN A
Protein name Genome Polyprotein, capsid protein VP1
Uniprot Accession B2ZUN0
The number of similar proteins 42
The number of binding states 7
The number of binding partners 4

Coloring

Unicolor (beige)

The number of binding partners

Group

Binding
state		 Binding partners
3VBF (CHAIN: A)
1 B2ZUN0   B2ZUN0   B2ZUN1  
2 B2ZUN0   B2ZUN0  
3 E5RPG0   E5RPG0  
4 F6KTB0   F6KTB0   F6KTB0   F6KTB0   F6KTB0   F6KTB0  
5 F6KTB0   F6KTB0   F6KTB0   F6KTB0   F6KTB0   F6KTB0   F6KTB0  
6 F6KTB0   F6KTB0   F6KTB0   F6KTB0   F6KTB0   F6KTB0   F6KTB0  
7 F6KTB0   F6KTB0   F6KTB0   F6KTB0   F6KTB0   F6KTB0   F6KTB0   F6KTB0  

Downdload

Format:

Molecule viewer


Only interaction residues
#binding
partners
  2
  1
  0

Sequence information

1   GDRVADVIES   SIGDSVSRAL   THALPAPTGQ   NTQVSSHRLD   TGKVPALQAA   50
51   EIGASSNASD   ESMIETRCVL   NSHSTAETTL   DSFFSRAGLV   GEIDLPLKGT   100
101   TNPNGYANWD   IDITGYAQMR   RKVELFTYMR   FDAEFTFVAC   TPTGEVVPQL   150
151   LQYMFVPPGA   PKPDSRESLA   WQTATNPSVF   VKLSDPPAQV   SVPFMSPASA   200
201   YQWFYDGYPT   FGEHKQEKDL   EYGAMPNNMM   GTFSVRTVGT   SKSKYPLVVR   250
251   IYMRMKHVRA   WIPRPMRNQN   YLFKANPNYA   GNSIKPTGAS   RTAITTL   300

Variants

Residue AA Source /
dbSNP		 Clinical
Significance
 Allele
Frequency
(> 0.0001)		 AlphaMissense
pathogenicity		 Disease name
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Reference

PiSite: a database of protein interaction sites using multiple binding states in the PDB, Miho Higurashi, Takashi Ishida and Kengo Kinoshita, Nucleic Acids Research 2009 37(Database issue):D360-D364

COPYRIGHTc2008-2019 Miho Higurashi, Takashi Ishida and Kengo Kinoshita. All rights reserved.