PDB ID 3S9D     CHAIN A
Protein name Interferon alpha-2
Uniprot Accession P01563
The number of similar proteins 13
The number of binding states 7
The number of binding partners 4

Coloring

Unicolor (beige)

The number of binding partners

Group

Binding
state
Binding partners
3S9D (CHAIN: A)
1 P48551  
2 Monomeric state
3 9GVL  
4 P48551   P17181  
5 9GVO   9GVO  
6 4Z5R   4Z5R  
7 9GW5   9GW5   9GW5  

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Format:

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Only interaction residues
#binding
partners
  4
  3
  2
  1
  0

Sequence information

1   ADPCDLPQTH   SLGSRRTLML   LAQMRRISLF   SCLKDRHDFG   FPQEEFGNQF   50
51   QKAETIPVLA   AMIAQIFNLF   STKDSSAAWD   ETLLDKFYTE   LYQQLNDLEA   100
101   CVIQGVGVTE   TPLMKEDSIL   AVRKYFQRIT   LYLKEKKYSP   CAWEVVRAEI   150
151   MRSFSLSTNL   QESLRSKE         200

Variants

Residue AA Source /
dbSNP
Clinical
Significance
Allele
Frequency
(> 0.0001)
AlphaMissense
pathogenicity
Disease name
8_SER THR gnomAD
chr9:21207005
rs10113876
- 0.235021 0.0923 -
8_SER THR 8.3kJPN
chr9:21187439
rs199767373
- 0.009 0.0923 -
8_SER THR 8.3kJPN
chr9:21207005
rs10113876
- 0.583 0.0923 -
9_LEU GLN 8.3kJPN
chr9:21187436
-
- 0.0002 0.092 -
10_GLY ARG gnomAD
chr9:21187434
rs529575491
- 0.00026404 0.1493 -
10_GLY ARG gnomAD
chr9:21207000
rs10113875
- 0.236573 0.1493 -
10_GLY ARG 8.3kJPN
chr9:21166515
rs547399618
- 0.0001 0.1493 -
10_GLY ARG 8.3kJPN
chr9:21187434
rs529575491
- 0.0081 0.1493 -
10_GLY ARG 8.3kJPN
chr9:21207000
rs10113875
- 0.5831 0.1493 -
10_GLY ARG 8.3kJPN
chr9:21228076
rs150852151
- 0.0001 0.1493 -
11_SER ASN gnomAD
chr9:21385228
rs116080401
- 0.000194981 0.0648 -
12_ARG GLY gnomAD
chr9:21187428
rs146590081
- 0.000935237 0.1173 -
13_ARG LYS gnomAD
chr9:21367900
rs530494185
- 0.000144657 0.1008 -
13_ARG LYS 8.3kJPN
chr9:21239828
-
- 0.0001 0.1008 -
14_ALA THR 8.3kJPN
chr9:21228064
rs565291074
- 0.0004 - -
15_LEU PHE gnomAD
chr9:21206983
rs138686794
- 0.000151321 0.1148 -
15_MET VAL gnomAD
chr9:21350775
rs780824980
- 0.000103468 - -
15_LEU SER gnomAD
chr9:21385216
rs780287380
- 0.000131292 0.1746 -
15_MET VAL 8.3kJPN
chr9:21350775
rs780824980
- 0.001 - -
19_ALA GLY gnomAD
chr9:21166487
rs138370577
- 0.00382117 0.0773 -
19_GLY ALA gnomAD
chr9:21206972
rs2230853
- 0.00376072 - -
19_ALA GLY gnomAD
chr9:21228048
rs141448576
- 0.000191042 0.0773 -
19_ALA VAL gnomAD
chr9:21367882
rs141823941
- 0.000112698 0.1593 -
19_ALA GLU gnomAD
chr9:21409300
rs28383786
- 0.000147143 0.1403 -
19_ALA GLY 8.3kJPN
chr9:21187406
rs752150173
- 0.0009 0.0773 -
19_GLY ALA 8.3kJPN
chr9:21206972
rs2230853
- 0.0013 - -
19_ALA GLY 8.3kJPN
chr9:21228048
rs141448576
- 0.0062 0.0773 -
20_GLN GLU 8.3kJPN
chr9:21187404
rs778866388
- 0.0001 0.0766 -
21_MET ILE gnomAD
chr9:21367875
rs370925363
- 0.000132805 0.6633 -
21_MET ILE 8.3kJPN
chr9:21166480
-
- 0.0001 0.6633 -
22_GLY GLU gnomAD
chr9:21228039
rs563006259
- 0.00109038 - -
22_GLY ARG gnomAD
chr9:21228040
rs12552812
- 0.228227 - -
22_GLY ARG 8.3kJPN
chr9:21187398
rs145690832
- 0.0002 - -
22_GLY ARG 8.3kJPN
chr9:21206964
rs763865345
- 0.0001 - -
22_GLY ARG 8.3kJPN
chr9:21228040
rs12552812
- 0.584 - -
22_GLY ALA 8.3kJPN
chr9:21305122
-
- 0.0001 - -
23_ARG LYS VAR_004012
rs1061959
LB/B - 0.1275 -
23_ARG LYS gnomAD
chr9:21385192
rs1061959
- 0.00108597 0.1275 -
23_ARG SER 8.3kJPN
chr9:21206959
-
- 0.0001 0.4067 -
24_ILE VAL gnomAD
chr9:21217166
rs28368158
- 0.0311667 0.123 -
24_ILE VAL gnomAD
chr9:21350748
rs190705153
- 0.000374031 0.123 -
24_ILE ASN 8.3kJPN
chr9:21206957
-
- 0.0001 0.1411 -
25_SER PRO gnomAD
chr9:21367865
rs201035450
- 0.000113073 0.0759 -
26_PRO HIS gnomAD
chr9:21166466
rs140930380
- 0.000127271 - -
26_HIS PRO gnomAD
chr9:21187385
rs201964250
- 0.000727964 - -
26_PRO HIS gnomAD
chr9:21206951
rs145687453
- 0.00115747 - -
26_HIS PRO gnomAD
chr9:21217159
rs41313958
- 0.00755666 - -
26_PRO HIS gnomAD
chr9:21228027
rs142331961
- 0.000123299 - -
26_LEU PRO gnomAD
chr9:21350741
rs61736254
- 0.00193081 0.0372 -
26_HIS PRO 8.3kJPN
chr9:21187385
rs201964250
- 0.0081 - -
26_PRO HIS 8.3kJPN
chr9:21206951
rs145687453
- 0.0249 - -
26_PRO ALA 8.3kJPN
chr9:21206952
-
- 0.0001 - -
26_HIS PRO 8.3kJPN
chr9:21217159
rs41313958
- 0.0003 - -
26_PRO HIS 8.3kJPN
chr9:21228027
rs142331961
- 0.0001 - -
28_SER CYS 8.3kJPN
chr9:21305104
-
- 0.0001 0.1483 -
31_LYS ARG 8.3kJPN
chr9:21166451
-
- 0.0001 0.089 -
32_ASP GLU gnomAD
chr9:21217140
rs139396991
- 0.000147156 0.3113 -
32_ASP GLU gnomAD
chr9:21239770
rs202103302
- 0.000847107 0.3113 -
32_ASP ASN 8.3kJPN
chr9:21166449
-
- 0.0001 0.245 -
33_ARG ILE gnomAD
chr9:21217138
rs151320966
- 0.000536929 0.2432 -
33_ARG SER 8.3kJPN
chr9:21166444
rs769083096
- 0.0001 0.5571 -
34_HIS ARG VAR_013001
rs73420190
LB/B - 0.08 -
34_HIS ASN gnomAD
chr9:21187362
rs144166492
- 0.000930536 0.0785 -
34_HIS ARG gnomAD
chr9:21385159
rs73420190
- 0.00311051 0.08 -
36_PHE CYS 8.3kJPN
chr9:21206921
-
- 0.0001 0.7369 -
37_ARG GLY gnomAD
chr9:21206919
rs28368144
- 0.0180187 - -
37_ARG GLY gnomAD
chr9:21350709
rs201824804
- 0.000893441 - -
37_ARG GLN 8.3kJPN
chr9:21206918
rs752204712
- 0.0001 - -
37_ARG GLY 8.3kJPN
chr9:21206919
rs28368144
- 0.0001 - -
38_ILE PHE gnomAD
chr9:21206916
rs28368145
- 0.0155116 - -
38_PHE LEU gnomAD
chr9:21409358
rs144215278
- 0.000369858 0.6681 -
38_ILE PHE 8.3kJPN
chr9:21206916
rs28368145
- 0.0001 - -
39_PRO LEU gnomAD
chr9:21305071
rs184880532
- 0.000198834 0.1982 -
39_PRO ALA 8.3kJPN
chr9:21385145
-
- 0.0001 0.2459 -
40_GLU LYS gnomAD
chr9:21187344
rs142712065
- 0.000310213 - -
40_GLU GLY 8.3kJPN
chr9:21187343
-
- 0.0005 - -
40_GLN HIS 8.3kJPN
chr9:21227984
rs1225192402
- 0.0001 0.2414 -
40_GLN TER 8.3kJPN
chr9:21440693
-
- 0.0001 - -
42_VAL GLU gnomAD
chr9:21217111
rs28368159
- 0.0335436 - -
42_VAL GLU 8.3kJPN
chr9:21217111
rs28368159
- 0.0002 - -
43_PHE SER gnomAD
chr9:21305059
rs149567637
- 0.000962349 0.1261 -
51_GLU ALA gnomAD
chr9:21350663
rs774942376
- 0.000103455 0.1116 -
51_GLU GLN gnomAD
chr9:21350664
rs762204032
- 0.00011541 0.076 -
51_PRO SER 8.3kJPN
chr9:21367784
-
- 0.0001 - -
51_PRO ALA 8.3kJPN
chr9:21440729
rs750346976
- 0.0003 - -
52_ALA VAL gnomAD
chr9:21187304
rs553318455
- 0.000131441 - -
52_ALA VAL gnomAD
chr9:21217078
rs569687693
- 0.00157562 - -
52_ALA VAL 8.3kJPN
chr9:21187304
rs553318455
- 0.0027 - -
53_ILE MET gnomAD
chr9:21187300
-
- 0.000155511 0.1257 -
53_ILE VAL gnomAD
chr9:21239706
rs147813603
- 0.000151149 0.1122 -
53_ILE THR 8.3kJPN
chr9:21187301
-
- 0.0001 0.3062 -
53_ILE THR 8.3kJPN
chr9:21217075
-
- 0.0001 0.3062 -
53_ILE VAL 8.3kJPN
chr9:21350658
rs763424513
- 0.0001 0.1122 -
54_SER PRO 8.3kJPN
chr9:21239703
rs367585796
- 0.0001 - -
57_HIS GLN 8.3kJPN
chr9:21305013
-
- 0.0002 - -
57_HIS ARG 8.3kJPN
chr9:21385090
rs374620029
- 0.0001 - -
60_MET ILE gnomAD
chr9:21239683
rs144323784
- 0.000759848 - -
61_GLN HIS 8.3kJPN
chr9:21239680
-
- 0.0001 - -
62_GLN PRO gnomAD
chr9:21187274
rs201785195
- 0.000633983 0.4797 -
63_THR ALA 8.3kJPN
chr9:21239676
-
- 0.0001 - -
65_ASN SER 8.3kJPN
chr9:21187265
-
- 0.0001 0.0938 -
65_ASN HIS 8.3kJPN
chr9:21206832
-
- 0.0001 0.0701 -
68_SER ASN 8.3kJPN
chr9:21166337
rs747665505
- 0.0001 0.1481 -
68_SER ASN 8.3kJPN
chr9:21206822
-
- 0.0001 0.1481 -
68_THR ILE 8.3kJPN
chr9:21367732
-
- 0.0002 - -
69_THR ALA 8.3kJPN
chr9:21227896
-
- 0.0001 0.1144 -
70_LYS GLU gnomAD
chr9:21166332
rs143332176
- 0.00137193 0.0665 -
70_GLU LYS gnomAD
chr9:21206817
rs146907935
- 0.000156115 - -
70_LYS GLU 8.3kJPN
chr9:21166332
rs143332176
- 0.0041 0.0665 -
70_LYS ARG 8.3kJPN
chr9:21304975
-
- 0.0001 0.083 -
70_LYS GLU 8.3kJPN
chr9:21440786
rs374654182
- 0.0003 0.0665 -
71_ASP HIS gnomAD
chr9:21217022
rs28368160
- 0.033493 0.1556 -
71_ASP GLY gnomAD
chr9:21350603
rs76096785
- 0.00310769 0.104 -
72_SER TER 8.3kJPN
chr9:21206810
-
- 0.0002 - -
74_ALA VAL gnomAD
chr9:21239642
rs143942931
- 0.000294401 0.1079 -
74_VAL ILE 8.3kJPN
chr9:21350595
rs147415542
- 0.0013 - -
75_THR ALA gnomAD
chr9:21166317
rs556420955
- 0.000170989 - -
75_THR ALA 8.3kJPN
chr9:21166317
rs556420955
- 0.0001 - -
75_ALA VAL 8.3kJPN
chr9:21350591
-
- 0.0001 0.1327 -
76_TRP TER 8.3kJPN
chr9:21227873
rs749484214
- 0.0002 - -
78_GLN LYS gnomAD
chr9:21166308
rs35082920
- 0.0126172 - -
78_GLU ASP 8.3kJPN
chr9:21239629
-
- 0.0001 0.1266 -
78_GLU VAL 8.3kJPN
chr9:21385027
-
- 0.0001 0.1597 -
79_THR ILE 8.3kJPN
chr9:21409483
-
- 0.0001 0.1459 -
80_LEU PRO gnomAD
chr9:21166301
rs114731280
- 0.000337983 0.2771 -
80_LEU PHE 8.3kJPN
chr9:21350577
rs142796435
- 0.0081 0.1644 -
81_LEU PRO 8.3kJPN
chr9:21385018
-
- 0.0001 0.4357 -
82_ASP GLU gnomAD
chr9:21216987
rs149344621
- 0.000648467 0.119 -
82_GLU ASP 8.3kJPN
chr9:21239617
rs767987631
- 0.0001 - -
84_PHE SER gnomAD
chr9:21239612
rs138970647
- 0.000373951 0.5986 -
86_THR ILE 8.3kJPN
chr9:21166283
-
- 0.0001 0.1393 -
87_GLU ASP 8.3kJPN
chr9:21206764
-
- 0.0001 0.1954 -
88_LEU ILE gnomAD
chr9:21206763
rs56035072
- 0.200903 0.1126 -
88_LEU ILE 8.3kJPN
chr9:21187197
rs200551386
- 0.0088 0.1126 -
88_LEU ILE 8.3kJPN
chr9:21206763
rs56035072
- 0.4467 0.1126 -
88_LEU PHE 8.3kJPN
chr9:21367673
-
- 0.0001 0.4162 -
89_ASN TYR gnomAD
chr9:21166275
rs45579138
- 0.000238582 - -
89_ASN TYR 8.3kJPN
chr9:21166275
rs45579138
- 0.0001 - -
90_GLN HIS gnomAD
chr9:21166270
rs61738019
- 0.000958319 0.2223 -
92_LEU MET gnomAD
chr9:21216959
rs41313956
- 0.00191333 0.1337 -
93_ASN TYR 8.3kJPN
chr9:21227824
-
- 0.0001 0.1438 -
94_ASP ASN gnomAD
chr9:21187179
rs746820810
- 0.000129745 0.1077 -
94_ASP GLU gnomAD
chr9:21206743
rs112963053
- 0.0302303 0.1797 -
94_ASN ASP gnomAD
chr9:21227821
rs141849715
- 0.00824277 - -
94_ASP GLU 8.3kJPN
chr9:21166258
-
- 0.0001 0.1797 -
94_ASP VAL 8.3kJPN
chr9:21166259
-
- 0.0001 0.1418 -
94_ASP ASN 8.3kJPN
chr9:21206745
rs763260433
- 0.0001 0.1077 -
94_ASN ASP 8.3kJPN
chr9:21227821
rs141849715
- 0.0004 - -
95_LEU VAL gnomAD
chr9:21216950
rs532628229
- 0.000143204 0.1315 -
96_GLU GLY 8.3kJPN
chr9:21384973
-
- 0.0001 0.2154 -
97_ALA THR gnomAD
chr9:21384971
rs146352658
- 0.000755756 0.082 -
97_ALA THR 8.3kJPN
chr9:21384971
rs146352658
- 0.0048 0.082 -
98_CYS SER gnomAD
chr9:21304891
rs140371188
- 0.00308637 0.5224 -
98_CYS TRP gnomAD
chr9:21367641
rs755128598
- 0.000151682 0.55 -
98_CYS TYR 8.3kJPN
chr9:21350522
rs747703612
- 0.0002 0.5004 -
114_ASP GLU 8.3kJPN
chr9:21409589
-
- 0.0001 0.2064 -
115_SER PHE gnomAD
chr9:21187115
rs1062574
- 0.0002686 0.2287 -
115_SER PHE 8.3kJPN
chr9:21187115
rs1062574
- 0.0036 0.2287 -
115_SER ALA 8.3kJPN
chr9:21206682
-
- 0.0001 0.0915 -
116_ILE THR 8.3kJPN
chr9:21166193
rs747217092
- 0.0001 0.1487 -
116_ILE MET 8.3kJPN
chr9:21350467
-
- 0.0001 0.1077 -
118_ALA GLY gnomAD
chr9:21227748
rs187118717
- 0.000246711 0.1697 -
118_ALA ASP gnomAD
chr9:21239510
rs773782668
- 0.000103397 0.2496 -
122_TYR SER gnomAD
chr9:21206660
rs139697457
- 0.000636431 0.7658 -
122_TYR HIS 8.3kJPN
chr9:21367571
rs538169450
- 0.0057 0.744 -
124_ARG GLN gnomAD
chr9:21367564
rs148767103
- 0.000137187 - -
124_ARG GLN gnomAD
chr9:21440949
rs370370604
- 0.000341131 - -
124_ARG TER 8.3kJPN
chr9:21367565
rs781489996
- 0.0011 - -
124_ARG TER 8.3kJPN
chr9:21440948
rs777221783
- - - -
128_LEU ARG 8.3kJPN
chr9:21187076
rs753956941
- 0.0001 0.0883 -
131_THR LYS gnomAD
chr9:21350423
rs202179791
- 0.000103421 - -
131_THR ILE 8.3kJPN
chr9:21187067
rs1062575
- 0.0001 - -
131_ILE THR 8.3kJPN
chr9:21206633
rs759704871
- 0.0002 - -
132_GLU LYS 8.3kJPN
chr9:21187065
rs912620310
- 0.0002 0.1566 -
133_LYS ARG 8.3kJPN
chr9:21187061
rs762226082
- 0.0001 0.1265 -
133_ARG LYS 8.3kJPN
chr9:21206627
rs3122463
- 0.0002 - -
135_TYR HIS 8.3kJPN
chr9:21166137
-
- 0.0001 0.2044 -
137_PRO LEU gnomAD
chr9:21239453
rs576347453
- 0.00154317 0.1114 -
137_PRO LEU 8.3kJPN
chr9:21216823
rs1428734896
- 0.0001 0.1114 -
137_PRO THR 8.3kJPN
chr9:21350406
-
- 0.0001 0.1137 -
138_CYS SER gnomAD
chr9:21187046
rs141139344
- 0.000330532 0.7624 -
139_ALA VAL gnomAD
chr9:21239447
rs28383771
- 0.00957393 0.5377 -
139_ALA GLY gnomAD
chr9:21440994
rs28383794
- 0.0817568 0.2877 -
140_TRP CYS gnomAD
chr9:21206605
rs28368148
- 0.00753701 0.8935 -
141_GLU GLY gnomAD
chr9:21441000
rs776758002
- 0.000635256 0.5604 -
141_GLU LYS 8.3kJPN
chr9:21227680
-
- 0.0001 0.5663 -
142_VAL ILE gnomAD
chr9:21206601
rs111996205
- 0.0040534 0.1048 -
143_VAL PHE gnomAD
chr9:21409674
rs200979516
- 0.000171024 0.4652 -
145_ALA VAL gnomAD
chr9:21187025
rs148386312
- 0.000736741 0.1556 -
145_ALA GLY gnomAD
chr9:21187025
rs148386312
- 0.000844265 0.1413 -
145_ALA THR gnomAD
chr9:21206592
rs146026692
- 0.00069224 0.1068 -
145_ALA GLY 8.3kJPN
chr9:21384826
rs770960367
- 0.0001 0.1413 -
147_ILE VAL 8.3kJPN
chr9:21409686
rs918501700
- 0.0001 0.117 -
148_MET ARG gnomAD
chr9:21187016
rs771981889
- 0.000230853 0.1119 -
148_MET ILE gnomAD
chr9:21384816
rs77047588
- 0.00122899 0.5246 -
148_MET LEU 8.3kJPN
chr9:21206583
-
- 0.0002 0.1431 -
149_ARG SER gnomAD
chr9:21206578
rs141756650
- 0.000764264 0.4802 -
150_SER PHE gnomAD
chr9:21239414
rs146172550
- 0.000151157 0.2341 -
150_SER TYR 8.3kJPN
chr9:21187010
-
- 0.0001 0.1724 -
151_LEU PHE gnomAD
chr9:21227650
rs143565460
- 0.00013755 - -
151_LEU PHE gnomAD
chr9:21239412
rs702212
- 0.000330175 - -
152_SER LEU gnomAD
chr9:21187004
rs539790643
- 0.000187047 0.145 -
152_SER PHE gnomAD
chr9:21367480
rs555351965
- 0.000131459 0.1281 -
152_SER PHE 8.3kJPN
chr9:21367480
rs555351965
- 0.0008 0.1281 -
154_SER LEU VAR_036329
-
US - 0.108 A breast cancer sample
155_LYS GLU gnomAD
chr9:21166077
rs3750478
- 0.020071 - -
155_ALA GLY gnomAD
chr9:21304720
rs144769373
- 0.00014879 - -
155_LYS ASN 8.3kJPN
chr9:21166075
-
- 0.0001 - -
155_LYS GLU 8.3kJPN
chr9:21166077
rs3750478
- 0.1331 - -
156_ASN LYS 8.3kJPN
chr9:21227633
-
- 0.0001 0.144 -
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Reference

PiSite: a database of protein interaction sites using multiple binding states in the PDB, Miho Higurashi, Takashi Ishida and Kengo Kinoshita, Nucleic Acids Research 2009 37(Database issue):D360-D364

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