PDB ID 2PMZ     CHAIN A
Protein name DNA-directed RNA polymerase subunit A
Uniprot Accession Q980R2
The number of similar proteins 7
The number of binding states 4
The number of binding partners 9

Coloring

Unicolor (beige)

The number of binding partners

Group

Binding
state		 Binding partners
2PMZ (CHAIN: A)
1 Q980K0   Q97ZJ9   Q980Q9   Q980A3   P95989   P58192   Q980R1  
2 B8YB62   B8YB60   B8YB59   B8YB57   B8YB54   B8YB55  
3 2WB1   2WB1   2WB1   2WB1   2WB1   2WB1   2WB1   2WB1  
4 Q980B8   Q980K0   Q97ZJ9   Q980Q9   Q980L5   Q980A3   P95989   P58192   3HKZ  

Downdload

Format:

Molecule viewer


Only interaction residues
#binding
partners
  1
  0

Sequence information

1   MSEKNIKGIK   FGILSPDEIR   KMSVTAIITP   DVYDEDGTPI   EGSVMDPRLG   50
51   VIEPGQKCPT   CGNTLGNCPG   HFGHIELVRP   VIHVGLVKHI   YEFLKATCRR   100
101   CGRVKISEDE   IEKYSRIYNA   IKKRWPSAAR   RLTEYVKKTA   MKAQVCPHCN   150
151   EKQYKIKLEK   PYNFYEERKE   GVAKLTPSDI   RERLEKIPDS   DVEILGYDPT   200
201   TSRPEWMILT   VLPVPPITIR   PSIMIESGIR   AEDDLTHKLV   DIVRINERLK   250
251   ESIDAGAPQL   IIEDLWDLLQ   YHVATYFDNE   IPGLPPSKHR   SGRPLRTLAQ   300
301   RLKGKEGRFR   GNLSGKRVDF   SSRTVISPDP   NISIDEVGVP   EIIAKTLTVP   350
351   ERITPWNIEK   LRQFVINGPD   KWPGANYVIR   PDGRRIDLRY   VKDRKELAST   400
401   LAPGYIIERH   LIDGDIVLFN   RQPSLHRISM   MAHRVRVLKG   LTFRLNLLVC   450
451   PPYNADFDGD   EMNLHVPQSE   EAIAEAKEIM   LVHKNIITPR   YGGPIIGAAQ   500
501   DYISGAYLLT   VKTTLLTKEE   AQQILGVADV   KIDLGEPAIL   APREYYTGKQ   550
551   VISAFLPKDF   NFHGQANVSS   GPRLCKNEDC   PHDSYVVIKN   GILLEGVFDK   600
601   KAIGNQQPES   ILHWLIKEYS   DEYGKWLMDN   LFRVFIRFVE   LQGFTMRLED   650
651   VSLGDDVKKE   IYNEIDRAKV   EVDNLIQKYK   NGELEPIPGR   TLEESLENYI   700
701   LDTLDKLRST   AGDIASKYLD   PFNFAYVMAR   TGARGSVLNI   TQMAAMLGQQ   750
751   SVRGERIKRG   YMTRTLPHFK   PYDISPEARG   FIYSSFRTGL   KPTELFFHAA   800
801   GGREGLVDTA   VRTSQSGYMQ   RRLINALSDL   RAEYDGTVRS   LYGEVVQVAY   850
851   GDDGVFPMYS   AHGKTVDVNR   IFERVVGWKA       900

Variants

Residue AA Source dbSNP Clinical
Significance
 Allele
Frequency
(> 0.0001)		 Disease name
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Reference

PiSite: a database of protein interaction sites using multiple binding states in the PDB, Miho Higurashi, Takashi Ishida and Kengo Kinoshita, Nucleic Acids Research 2009 37(Database issue):D360-D364

COPYRIGHTc2008-2019 Miho Higurashi, Takashi Ishida and Kengo Kinoshita. All rights reserved.