PDB ID | 1TSR | CHAIN | A |
---|---|---|---|
Protein name | PROTEIN (P53 TUMOR SUPPRESSOR) | ||
Uniprot Accession | P04637 | ||
The number of similar proteins | 231 | ||
The number of binding states | 11 | ||
The number of binding partners | 9 |
Unicolor (beige)
The number of binding partners
Group
Binding state |
Binding partners |
---|---|
1TSR (CHAIN: A) | |
1 | P04637 |
2 | Monomeric state |
3 | 4QO1 |
4 | Q12888 |
5 | Q07817 |
6 | Q8WUF5 |
7 | Q9DH70 |
8 | P04637 P04637 |
9 | P03126 P0AEX9 |
10 | P04637 P00282 |
11 | P04637 Q12888 |
Only interaction residues |
|
||||||||||||||||
|
Residue | AA | Source | dbSNP | Clinical Significance |
Allele Frequency (> 0.0001) |
Disease name | |
---|---|---|---|---|---|---|---|
94_SER | THR | VAR_005859 |
-
|
US | - | Sporadic cancers | |
94_SER | LEU | VAR_044642 |
-
|
US | - | Sporadic cancers | |
94_SER | TER |
ClinVar chr17:7579406 |
-
|
Pathogenic | - | Hereditary cancer-predisposing syndrome|Li-Fraumeni syndrome [MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162|MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524] | |
95_SER | PHE | VAR_044643 |
-
|
US | - | Sporadic cancers | |
95_SER | THR | VAR_044644 |
-
|
US | - | A sporadic cancer | |
96_SER | CYS | VAR_044645 |
-
|
US | - | A sporadic cancer | |
96_SER | PHE | VAR_044646 |
-
|
US | - | Sporadic cancers | |
96_SER | PRO | VAR_044647 |
-
|
US | - | A sporadic cancer | |
97_VAL | ALA | VAR_044648 |
-
|
US | - | A sporadic cancer | |
97_VAL | PHE | VAR_044649 |
-
|
US | - | A sporadic cancer | |
97_VAL | ILE | VAR_044650 |
rs730882023
|
US | - | Familial cancer not matching LFS | |
98_PRO | LEU | VAR_044651 |
rs1245723119
|
US | - | Sporadic cancers | |
98_PRO | SER | VAR_044652 |
-
|
US | - | Sporadic cancers | |
99_SER | PHE | VAR_044653 |
-
|
US | - | Sporadic cancers | |
99_SER | PRO | VAR_044654 |
-
|
US | - | A sporadic cancer | |
100_GLN | ARG | VAR_044655 |
-
|
US | - | A sporadic cancer | |
100_GLN | TER |
ClinVar chr17:7579389 |
rs1567555994
|
Pathogenic/Likely pathogenic | - | Neoplasm of ovary|Hereditary cancer-predisposing syndrome|Li-Fraumeni syndrome|Malignant tumor of urinary bladder [Human Phenotype Ontology:HP:0100615,MONDO:MONDO:0021068,MeSH:D010051,MedGen:C0919267,OMIM:167000|MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162|MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524|MONDO:MONDO:0001187,MedGen:C0005684,OMIM:109800,Orphanet:157980] | |
101_LYS | ASN | VAR_044656 |
rs878854069
|
US | - | A sporadic cancer | |
101_LYS | ARG | VAR_044657 |
-
|
US | - | Sporadic cancers | |
102_THR | ILE | VAR_044658 |
rs786202717
|
US | - | Sporadic cancers | |
103_TYR | TER |
ClinVar chr17:7579378 |
rs1597373901
|
Pathogenic | - | Hereditary cancer-predisposing syndrome|Li-Fraumeni syndrome|Li-Fraumeni syndrome 1 [MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162|MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524|Gene:553989,MedGen:C1835398,OMIM:151623,Orphanet:524] | |
103_TYR | TER |
ClinVar chr17:7579378 |
-
|
Pathogenic | - | Li-Fraumeni syndrome|not provided [MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524|MedGen:C3661900] | |
104_GLN | HIS | VAR_044659 |
-
|
US | - | Sporadic cancers | |
104_GLN | LEU | VAR_044660 |
-
|
US | - | A sporadic cancer | |
104_GLN | TER |
ClinVar chr17:7579377 |
rs1567555934
|
Pathogenic | - | Li-Fraumeni syndrome|Neoplasm of ovary [MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524|Human Phenotype Ontology:HP:0100615,MONDO:MONDO:0021068,MeSH:D010051,MedGen:C0919267,OMIM:167000] | |
105_GLY | CYS | VAR_044661 |
-
|
LP/P | - | Li-Fraumeni syndrome (LFS) [MIM:151623] | |
105_GLY | ASP | VAR_044662 |
rs587781504
|
US | - | Sporadic cancers | |
105_GLY | ARG | VAR_044663 |
rs1060501195
|
US | - | Sporadic cancers | |
105_GLY | SER | VAR_044664 |
rs1060501195
|
US | - | A sporadic cancer | |
105_GLY | VAL | VAR_044665 |
-
|
US | - | Sporadic cancers | |
105_GLY | ARG |
ClinVar chr17:7579374 |
rs1060501195
|
Pathogenic/Likely pathogenic | - | Li-Fraumeni syndrome|Hereditary cancer-predisposing syndrome|Li-Fraumeni syndrome 1 [MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524|MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162|Gene:553989,MedGen:C1835398,OMIM:151623,Orphanet:524] | |
105_GLY | SER |
ClinVar chr17:7579374 |
rs1060501195
|
Pathogenic/Likely pathogenic | - | Hereditary cancer-predisposing syndrome|Li-Fraumeni syndrome 1|Li-Fraumeni syndrome [MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162|Gene:553989,MedGen:C1835398,OMIM:151623,Orphanet:524|MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524] | |
105_GLY | VAL |
ClinVar chr17:7579373 |
rs587781504
|
Likely pathogenic | - | Neoplasm of ovary|Lung adenocarcinoma [Human Phenotype Ontology:HP:0100615,MONDO:MONDO:0021068,MeSH:D010051,MedGen:C0919267,OMIM:167000|Human Phenotype Ontology:HP:0030078,MONDO:MONDO:0005061,MeSH:D000077192,MedGen:C0152013] | |
106_SER | GLY | VAR_044666 |
-
|
US | - | A sporadic cancer | |
106_SER | ARG | VAR_044667 |
rs1555526581
|
US | - | A familial cancer not matching LFS | |
106_SER | ARG |
ClinVar chr17:7579369 |
rs1555526581
|
Likely pathogenic | - | not specified|Li-Fraumeni syndrome [MedGen:CN169374|MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524] | |
107_TYR | CYS | VAR_044668 |
rs587782447
|
US | - | A sporadic cancer | |
107_TYR | ASP | VAR_044669 |
-
|
US | - | Sporadic cancers | |
107_TYR | HIS | VAR_044670 |
rs368771578
|
US | - | A sporadic cancer | |
107_TYR | TER |
ClinVar chr17:7579366 |
rs770776262
|
Pathogenic | - | Li-Fraumeni syndrome [MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524] | |
107_TYR | TER |
ClinVar chr17:7579366 |
rs770776262
|
Pathogenic | - | Li-Fraumeni syndrome|not provided [MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524|MedGen:C3661900] | |
108_GLY | ASP | VAR_044671 |
-
|
US | - | A sporadic cancer | |
108_GLY | SER | VAR_044672 |
rs587782461
|
US | - | Sporadic cancers | |
109_PHE | CYS | VAR_044673 |
-
|
US | - | Sporadic cancers | |
109_PHE | LEU | VAR_044674 |
-
|
US | - | A sporadic cancer | |
109_PHE | SER | VAR_044675 |
rs1064796722
|
US | - | Sporadic cancers | |
109_PHE | VAL |
ClinVar chr17:7579362 |
rs1057523496
|
Likely pathogenic | - | not provided [MedGen:CN517202] | |
109_PHE | CYS |
ClinVar chr17:7579361 |
rs1064796722
|
Likely pathogenic | - | Neoplasm of ovary [Human Phenotype Ontology:HP:0100615,MONDO:MONDO:0021068,MeSH:D010051,MedGen:C0919267,OMIM:167000] | |
109_PHE | ILE |
ClinVar chr17:7579362 |
-
|
Likely pathogenic | - | Li-Fraumeni syndrome [MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524] | |
110_ARG | CYS | VAR_005860 |
rs587781371
|
US | - | Sporadic cancers | |
110_ARG | LEU | VAR_005861 |
rs11540654
|
US | - | A familial cancer not matching LFS | |
110_ARG | PRO | VAR_005862 |
rs11540654
|
US | - | Sporadic cancers | |
110_ARG | GLY | VAR_044676 |
-
|
US | - | A sporadic cancer | |
110_ARG | HIS | VAR_044677 |
rs11540654
|
US | - | Sporadic cancers | |
110_ARG | SER | VAR_044678 |
rs587781371
|
US | - | A sporadic cancer | |
110_ARG | PRO |
ClinVar chr17:7579358 |
rs11540654
|
Pathogenic | - | Hereditary cancer-predisposing syndrome|Li-Fraumeni syndrome|Li-Fraumeni syndrome 1|Adrenocortical carcinoma, hereditary [MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162|MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524|Gene:553989,MedGen:C1835398,OMIM:151623,Orphanet:524|MONDO:MONDO:0008734,MedGen:C1859972,OMIM:202300,Orphanet:1501] | |
110_ARG | LEU |
ClinVar chr17:7579358 |
rs11540654
|
Pathogenic/Likely pathogenic | - | Li-Fraumeni syndrome|Hereditary cancer-predisposing syndrome|Neoplasm of ovary|Li-Fraumeni syndrome 1 [MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524|MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162|Human Phenotype Ontology:HP:0100615,MONDO:MONDO:0021068,MeSH:D010051,MedGen:C0919267,OMIM:167000|Gene:553989,MedGen:C1835398,OMIM:151623,Orphanet:524] | |
110_ARG | HIS |
8.3kJPN chr17:7579358 |
rs11540654
|
- | 0.0001 | - | |
111_LEU | MET | VAR_044679 |
-
|
US | - | A sporadic cancer | |
111_LEU | PRO | VAR_044680 |
rs1057519997
|
US | - | Sporadic cancers | |
111_LEU | GLN | VAR_044681 |
rs1057519997
|
US | - | Sporadic cancers | |
111_LEU | ARG | VAR_044682 |
rs1057519997
|
US | - | Sporadic cancers | |
112_GLY | ASP | VAR_044683 |
-
|
US | - | Sporadic cancers | |
112_GLY | SER | VAR_044684 |
rs1423803759
|
US | - | Sporadic cancers | |
113_PHE | CYS | VAR_005863 |
-
|
US | - | Sporadic cancers | |
113_PHE | VAL | VAR_033033 |
rs587781642
|
US | - | Sporadic cancers | |
113_PHE | ILE | VAR_044685 |
-
|
US | - | A sporadic cancer | |
113_PHE | LEU | VAR_044686 |
-
|
US | - | Sporadic cancers | |
113_PHE | SER | VAR_044687 |
-
|
US | - | Sporadic cancers | |
113_PHE | GLY | VAR_045788 |
-
|
US | - | A sporadic cancer | |
113_PHE | LEU |
ClinVar chr17:7579348 |
-
|
Likely pathogenic | - | Li-Fraumeni syndrome [MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524] | |
114_LEU | TER |
ClinVar chr17:7579346 |
rs781724995
|
Pathogenic | - | Neoplasm of ovary [Human Phenotype Ontology:HP:0100615,MONDO:MONDO:0021068,MeSH:D010051,MedGen:C0919267,OMIM:167000] | |
115_HIS | TYR | VAR_044688 |
-
|
US | - | Sporadic cancers | |
116_SER | CYS | VAR_044689 |
-
|
US | - | Sporadic cancers | |
116_SER | PHE | VAR_044690 |
-
|
US | - | A sporadic cancer | |
116_SER | PRO | VAR_044691 |
-
|
US | - | A sporadic cancer | |
117_GLY | GLU | VAR_044692 |
rs755238756
|
US | - | Sporadic cancers | |
117_GLY | ARG | VAR_044693 |
rs1555526518
|
US | - | Sporadic cancers | |
118_THR | ALA | VAR_044694 |
-
|
US | - | A sporadic cancer | |
118_THR | ILE | VAR_044695 |
rs1064794141
|
US | - | Sporadic cancers | |
118_THR | ARG | VAR_044696 |
-
|
US | - | A sporadic cancer | |
119_ALA | ASP | VAR_044697 |
-
|
US | - | A sporadic cancer | |
119_ALA | THR | VAR_044698 |
-
|
US | - | A sporadic cancer | |
119_ALA | GLY |
ClinVar chr17:7579331 |
rs2073451331
|
Likely pathogenic | - | Li-Fraumeni syndrome [MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524] | |
120_LYS | GLU | VAR_044699 |
rs121912658
|
US | - | Sporadic cancers | |
120_LYS | MET | VAR_044700 |
-
|
US | - | Sporadic cancers | |
120_LYS | GLN | VAR_044701 |
rs121912658
|
US | - | A sporadic cancer | |
120_LYS | ARG | VAR_044702 |
-
|
US | - | Sporadic cancers | |
120_LYS | TER |
ClinVar chr17:7579329 |
rs121912658
|
Pathogenic | - | Li-fraumeni-like syndrome [MONDO:MONDO:0800290,MedGen:C2675080] | |
121_SER | PHE | VAR_044703 |
-
|
US | - | Sporadic cancers | |
122_VAL | LEU | VAR_044704 |
-
|
US | - | A sporadic cancer | |
123_THR | ILE | VAR_044705 |
rs1555526486
|
US | - | A sporadic cancer | |
123_THR | ASN | VAR_044706 |
-
|
US | - | A sporadic cancer | |
124_CYS | GLY | VAR_044707 |
rs730881997
|
US | - | A sporadic cancer | |
124_CYS | ARG | VAR_044708 |
-
|
US | - | Sporadic cancers | |
124_CYS | SER | VAR_044709 |
rs730881997
|
US | - | Sporadic cancers | |
124_CYS | TRP | VAR_044710 |
-
|
US | - | A sporadic cancer | |
124_CYS | TYR | VAR_044711 |
-
|
US | - | A sporadic cancer | |
124_CYS | TER |
ClinVar chr17:7579315 |
rs1555526478
|
Pathogenic | - | Li-Fraumeni syndrome [MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524] | |
125_THR | MET | VAR_005864 |
rs786201057
|
US | - | Sporadic cancers | |
125_THR | ALA | VAR_044712 |
-
|
US | - | A sporadic cancer | |
125_THR | LYS | VAR_044713 |
rs786201057
|
US | - | Sporadic cancers | |
125_THR | PRO | VAR_044714 |
rs1057520003
|
US | - | A sporadic cancer | |
125_THR | ARG | VAR_044715 |
rs786201057
|
US | - | Sporadic cancers | |
125_THR | THR |
ClinVar chr17:7579312 |
rs55863639
|
Pathogenic | - | Li-Fraumeni syndrome|Hereditary cancer-predisposing syndrome|not provided|Rhabdomyosarcoma|Malignant tumor of prostate|Breast and/or ovarian cancer|Glioma susceptibility 1|Li-Fraumeni syndrome 1|TP53-related condition|Adrenocortical carcinoma, hereditary [MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524|MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162|MedGen:C3661900|Human Phenotype Ontology:HP:0002859,MONDO:MONDO:0005212,MeSH:D012208,MedGen:C0035412,Orphanet:780|Human Phenotype Ontology:HP:0012125,MONDO:MONDO:0008315,MedGen:C0376358,OMIM:176807,Orphanet:1331|MedGen:CN221562|MONDO:MONDO:0024498,MedGen:C2750850,OMIM:137800|Gene:553989,MedGen:C1835398,OMIM:151623,Orphanet:524||MONDO:MONDO:0008734,MedGen:C1859972,OMIM:202300,Orphanet:1501] | |
125_THR | LYS |
ClinVar chr17:7579313 |
rs786201057
|
Pathogenic/Likely pathogenic | - | Li-Fraumeni syndrome|Brainstem glioma|Lung adenocarcinoma|Glioblastoma|Papillary renal cell carcinoma type 1|Acute myeloid leukemia|Neoplasm of the large intestine|Small cell lung carcinoma|Squamous cell carcinoma of the head and neck|Hepatocellular carcinoma|Carcinoma of esophagus|Breast neoplasm|Transitional cell carcinoma of the bladder|Gastric adenocarcinoma|Squamous cell lung carcinoma|Malignant melanoma of skin|Pancreatic adenocarcinoma|Squamous cell carcinoma of the skin|Ovarian serous cystadenocarcinoma|Adrenal cortex carcinoma|Neoplasm of brain|Hereditary cancer-predisposing syndrome [MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524|Human Phenotype Ontology:HP:0010796,MONDO:MONDO:0002911,MedGen:C0677865|Human Phenotype Ontology:HP:0030078,MONDO:MONDO:0005061,MeSH:D000077192,MedGen:C0152013|MONDO:MONDO:0018177,MeSH:D005909,MedGen:C0017636,Orphanet:360|Human Phenotype Ontology:HP:0011797,MedGen:C1336839,OMIM:605074,Orphanet:47044|Human Phenotype Ontology:HP:0001914,Human Phenotype Ontology:HP:0004808,Human Phenotype Ontology:HP:0004843,Human Phenotype Ontology:HP:0005516,Human Phenotype Ontology:HP:0006724,Human Phenotype Ontology:HP:0006728,MONDO:MONDO:0018874,MeSH:D015470,MedGen:C0023467,OMIM:601626,Orphanet:519|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|Human Phenotype Ontology:HP:0030357,MONDO:MONDO:0008433,MeSH:D055752,MedGen:C0149925,OMIM:182280,Orphanet:70573|MONDO:MONDO:0010150,MeSH:D000077195,MedGen:C1168401,OMIM:275355,Orphanet:67037|Human Phenotype Ontology:HP:0001402,Human Phenotype Ontology:HP:0002899,Human Phenotype Ontology:HP:0003007,Human Phenotype Ontology:HP:0006750,MONDO:MONDO:0007256,MedGen:C2239176,OMIM:114550,Orphanet:88673|Human Phenotype Ontology:HP:0011459,MONDO:MONDO:0019086,MedGen:C0152018,Orphanet:70482|Human Phenotype Ontology:HP:0010623,Human Phenotype Ontology:HP:0100013,MONDO:MONDO:0021100,MeSH:D001943,MedGen:C1458155|Human Phenotype Ontology:HP:0006740,MONDO:MONDO:0005611,MedGen:C0279680|Human Phenotype Ontology:HP:0033770,MONDO:MONDO:0005036,MedGen:C0278701|Human Phenotype Ontology:HP:0030359,MONDO:MONDO:0005097,MedGen:C0149782|Human Phenotype Ontology:HP:0012056,MONDO:MONDO:0005012,MeSH:C562393,MedGen:C0151779|Human Phenotype Ontology:HP:0006725,MONDO:MONDO:0006047,MedGen:C0281361|Human Phenotype Ontology:HP:0006739,Human Phenotype Ontology:HP:0007614,MONDO:MONDO:0002529,MedGen:C0553723|MONDO:MONDO:0006046,MedGen:C0279663|Human Phenotype Ontology:HP:0002889,Human Phenotype Ontology:HP:0006744,Human Phenotype Ontology:HP:0006759,MONDO:MONDO:0006639,MeSH:D018268,MedGen:C0206686,Orphanet:1501|Human Phenotype Ontology:HP:0030692,MONDO:MONDO:0021211,MeSH:D001932,MedGen:C0006118|MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162] | |
125_THR | THR |
ClinVar chr17:7579312 |
rs55863639
|
Pathogenic | - | Li-Fraumeni syndrome|not provided|Hereditary cancer-predisposing syndrome [MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524|MedGen:C3661900|MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162] | |
125_THR | ARG |
ClinVar chr17:7579313 |
rs786201057
|
Pathogenic/Likely pathogenic | - | Glioblastoma|Breast neoplasm|Papillary renal cell carcinoma type 1|Squamous cell carcinoma of the skin|Small cell lung carcinoma|Neoplasm of the large intestine|Hepatocellular carcinoma|Neoplasm of brain|Acute myeloid leukemia|Carcinoma of esophagus|Gastric adenocarcinoma|Squamous cell lung carcinoma|Malignant melanoma of skin|Transitional cell carcinoma of the bladder|Lung adenocarcinoma|Squamous cell carcinoma of the head and neck|Pancreatic adenocarcinoma|Adrenal cortex carcinoma|Ovarian serous cystadenocarcinoma|Li-Fraumeni syndrome|Hereditary cancer-predisposing syndrome|Brainstem glioma|Li-Fraumeni syndrome 1 [MONDO:MONDO:0018177,MeSH:D005909,MedGen:C0017636,Orphanet:360|Human Phenotype Ontology:HP:0010623,Human Phenotype Ontology:HP:0100013,MONDO:MONDO:0021100,MeSH:D001943,MedGen:C1458155|Human Phenotype Ontology:HP:0011797,MedGen:C1336839,OMIM:605074,Orphanet:47044|Human Phenotype Ontology:HP:0006739,Human Phenotype Ontology:HP:0007614,MONDO:MONDO:0002529,MedGen:C0553723|Human Phenotype Ontology:HP:0030357,MONDO:MONDO:0008433,MeSH:D055752,MedGen:C0149925,OMIM:182280,Orphanet:70573|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|Human Phenotype Ontology:HP:0001402,Human Phenotype Ontology:HP:0002899,Human Phenotype Ontology:HP:0003007,Human Phenotype Ontology:HP:0006750,MONDO:MONDO:0007256,MedGen:C2239176,OMIM:114550,Orphanet:88673|Human Phenotype Ontology:HP:0030692,MONDO:MONDO:0021211,MeSH:D001932,MedGen:C0006118|Human Phenotype Ontology:HP:0001914,Human Phenotype Ontology:HP:0004808,Human Phenotype Ontology:HP:0004843,Human Phenotype Ontology:HP:0005516,Human Phenotype Ontology:HP:0006724,Human Phenotype Ontology:HP:0006728,MONDO:MONDO:0018874,MeSH:D015470,MedGen:C0023467,OMIM:601626,Orphanet:519|Human Phenotype Ontology:HP:0011459,MONDO:MONDO:0019086,MedGen:C0152018,Orphanet:70482|Human Phenotype Ontology:HP:0033770,MONDO:MONDO:0005036,MedGen:C0278701|Human Phenotype Ontology:HP:0030359,MONDO:MONDO:0005097,MedGen:C0149782|Human Phenotype Ontology:HP:0012056,MONDO:MONDO:0005012,MeSH:C562393,MedGen:C0151779|Human Phenotype Ontology:HP:0006740,MONDO:MONDO:0005611,MedGen:C0279680|Human Phenotype Ontology:HP:0030078,MONDO:MONDO:0005061,MeSH:D000077192,MedGen:C0152013|MONDO:MONDO:0010150,MeSH:D000077195,MedGen:C1168401,OMIM:275355,Orphanet:67037|Human Phenotype Ontology:HP:0006725,MONDO:MONDO:0006047,MedGen:C0281361|Human Phenotype Ontology:HP:0002889,Human Phenotype Ontology:HP:0006744,Human Phenotype Ontology:HP:0006759,MONDO:MONDO:0006639,MeSH:D018268,MedGen:C0206686,Orphanet:1501|MONDO:MONDO:0006046,MedGen:C0279663|MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524|MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162|Human Phenotype Ontology:HP:0010796,MONDO:MONDO:0002911,MedGen:C0677865|Gene:553989,MedGen:C1835398,OMIM:151623,Orphanet:524] | |
125_THR | THR |
ClinVar chr17:7579312 |
rs55863639
|
Pathogenic/Likely pathogenic | - | Hereditary cancer-predisposing syndrome|not provided|TP53-related condition|Li-Fraumeni syndrome|Adrenocortical carcinoma, hereditary [MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162|MedGen:C3661900||MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524|MONDO:MONDO:0008734,MedGen:C1859972,OMIM:202300,Orphanet:1501] | |
126_TYR | ASP | VAR_005865 |
rs886039483
|
US | - | Sporadic cancers | |
126_TYR | ASN | VAR_005866 |
rs886039483
|
US | - | Sporadic cancers | |
126_TYR | CYS | VAR_044716 |
rs1555526335
|
US | - | A familial cancer not matching LFS | |
126_TYR | PHE | VAR_044717 |
-
|
US | - | A sporadic cancer | |
126_TYR | HIS | VAR_044718 |
-
|
US | - | Sporadic cancers | |
126_TYR | SER | VAR_044719 |
-
|
US | - | Sporadic cancers | |
126_TYR | GLY | VAR_045789 |
-
|
US | - | A sporadic cancer | |
126_TYR | TER |
ClinVar chr17:7578552 |
rs1567554500
|
Pathogenic/Likely pathogenic | - | Li-Fraumeni syndrome|Hereditary cancer-predisposing syndrome|Adrenocortical carcinoma, hereditary|Gastric cancer [MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524|MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162|MONDO:MONDO:0008734,MedGen:C1859972,OMIM:202300,Orphanet:1501|Human Phenotype Ontology:HP:0012126,MONDO:MONDO:0001056,MeSH:D013274,MedGen:C0024623,OMIM:613659] | |
126_TYR | TER |
ClinVar chr17:7578552 |
rs1567554500
|
Pathogenic | - | Li-Fraumeni syndrome|Prostate cancer, hereditary, 1 [MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524|MONDO:MONDO:0011098,MedGen:C4722327,OMIM:601518,Orphanet:1331] | |
127_SER | PHE | VAR_005867 |
rs730881999
|
US | - | Sporadic cancers | |
127_SER | CYS | VAR_044720 |
rs730881999
|
US | - | A sporadic cancer | |
127_SER | PRO | VAR_044721 |
-
|
US | - | Sporadic cancers | |
127_SER | THR | VAR_044722 |
-
|
US | - | Sporadic cancers | |
127_SER | TYR | VAR_044723 |
-
|
US | - | Sporadic cancers | |
127_SER | CYS |
ClinVar chr17:7578550 |
rs730881999
|
Pathogenic | - | Li-Fraumeni syndrome [MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524] | |
127_SER | TYR |
ClinVar chr17:7578550 |
rs730881999
|
Pathogenic | - | Li-Fraumeni syndrome|Li-Fraumeni syndrome 1|Hereditary cancer-predisposing syndrome [MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524|Gene:553989,MedGen:C1835398,OMIM:151623,Orphanet:524|MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162] | |
127_SER | PRO |
ClinVar chr17:7578551 |
rs1597371694
|
Pathogenic | - | Li-Fraumeni syndrome|Hereditary cancer-predisposing syndrome [MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524|MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162] | |
128_PRO | SER | VAR_005868 |
-
|
US | - | Sporadic cancers | |
128_PRO | ALA | VAR_044724 |
-
|
US | - | Sporadic cancers | |
128_PRO | LEU | VAR_044725 |
-
|
US | - | Sporadic cancers | |
128_PRO | ARG | VAR_044726 |
-
|
US | - | Sporadic cancers | |
129_ALA | ASP | VAR_005869 |
-
|
US | - | Sporadic cancers | |
129_ALA | GLY | VAR_044727 |
-
|
US | - | A sporadic cancer | |
129_ALA | THR | VAR_044728 |
rs1438095083
|
US | - | Sporadic cancers | |
129_ALA | VAL | VAR_044729 |
rs137852792
|
US | - | Sporadic cancers | |
130_LEU | ARG | VAR_005870 |
-
|
US | - | Sporadic cancers | |
130_LEU | PHE | VAR_044730 |
rs863224683
|
US | - | Sporadic cancers | |
130_LEU | HIS | VAR_044731 |
-
|
US | - | Sporadic cancers | |
130_LEU | ILE | VAR_044732 |
-
|
US | - | A sporadic cancer | |
130_LEU | PRO | VAR_044733 |
rs1131691013
|
US | - | Sporadic cancers | |
130_LEU | VAL | VAR_044734 |
rs863224683
|
US | - | Sporadic cancers | |
130_LEU | PRO |
ClinVar chr17:7578541 |
rs1131691013
|
Pathogenic | - | Hereditary cancer-predisposing syndrome|12 conditions [MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162|12 conditions] | |
130_LEU | HIS |
ClinVar chr17:7578541 |
rs1131691013
|
Pathogenic | - | Hereditary cancer-predisposing syndrome [MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162] | |
131_ASN | SER | VAR_005871 |
-
|
US | - | Sporadic cancers | |
131_ASN | LYS | VAR_005872 |
rs769270327
|
US | - | Sporadic cancers | |
131_ASN | ASP | VAR_044735 |
-
|
US | - | A sporadic cancer | |
131_ASN | HIS | VAR_044736 |
-
|
US | - | Sporadic cancers | |
131_ASN | ILE | VAR_044737 |
rs1131691037
|
US | - | Sporadic cancers | |
131_ASN | THR | VAR_044738 |
-
|
US | - | A sporadic cancer | |
131_ASN | TYR | VAR_044739 |
rs587782160
|
US | - | Sporadic cancers | |
131_ASN | TYR |
ClinVar chr17:7578539 |
rs587782160
|
Pathogenic | - | Hereditary cancer-predisposing syndrome [MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162] | |
131_ASN | ILE |
ClinVar chr17:7578538 |
rs1131691037
|
Pathogenic | - | Hereditary cancer-predisposing syndrome|Li-Fraumeni syndrome|Li-Fraumeni syndrome 1 [MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162|MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524|Gene:553989,MedGen:C1835398,OMIM:151623,Orphanet:524] | |
132_LYS | MET | VAR_005873 |
rs1057519996
|
US | - | Sporadic cancers | |
132_LYS | GLN | VAR_005874 |
rs747342068
|
US | - | Sporadic cancers | |
132_LYS | GLU | VAR_044740 |
rs747342068
|
LP/P | - | Li-Fraumeni syndrome (LFS) [MIM:151623] | |
132_LYS | ASN | VAR_044741 |
rs866775781
|
US | - | Sporadic cancers | |
132_LYS | ARG | VAR_044742 |
rs1057519996
|
US | - | Sporadic cancers | |
132_LYS | THR | VAR_044743 |
rs1057519996
|
US | - | Sporadic cancers | |
132_LYS | LEU | VAR_045790 |
-
|
US | - | A sporadic cancer | |
132_LYS | TRP | VAR_045791 |
-
|
US | - | A sporadic cancer | |
132_LYS | ASN |
ClinVar chr17:7578534 |
rs866775781
|
Likely pathogenic | - | Lung adenocarcinoma|Multiple myeloma|Breast neoplasm|Squamous cell carcinoma of the head and neck|Neoplasm of the large intestine|Uterine carcinosarcoma|Squamous cell lung carcinoma|Pancreatic adenocarcinoma|Transitional cell carcinoma of the bladder|Ovarian serous cystadenocarcinoma|Adrenal cortex carcinoma|Glioblastoma|Gastric adenocarcinoma|Neoplasm of uterine cervix|Carcinoma of esophagus|Neoplasm of brain|Li-Fraumeni syndrome [Human Phenotype Ontology:HP:0030078,MONDO:MONDO:0005061,MeSH:D000077192,MedGen:C0152013|Human Phenotype Ontology:HP:0006775,MONDO:MONDO:0009693,MeSH:D009101,MedGen:C0026764,OMIM:254500,Orphanet:29073,Orphanet:85443|Human Phenotype Ontology:HP:0010623,Human Phenotype Ontology:HP:0100013,MONDO:MONDO:0021100,MeSH:D001943,MedGen:C1458155|MONDO:MONDO:0010150,MeSH:D000077195,MedGen:C1168401,OMIM:275355,Orphanet:67037|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|MONDO:MONDO:0006485,MedGen:C0280630|Human Phenotype Ontology:HP:0030359,MONDO:MONDO:0005097,MedGen:C0149782|Human Phenotype Ontology:HP:0006725,MONDO:MONDO:0006047,MedGen:C0281361|Human Phenotype Ontology:HP:0006740,MONDO:MONDO:0005611,MedGen:C0279680|MONDO:MONDO:0006046,MedGen:C0279663|Human Phenotype Ontology:HP:0002889,Human Phenotype Ontology:HP:0006744,Human Phenotype Ontology:HP:0006759,MONDO:MONDO:0006639,MeSH:D018268,MedGen:C0206686,Orphanet:1501|MONDO:MONDO:0018177,MeSH:D005909,MedGen:C0017636,Orphanet:360|Human Phenotype Ontology:HP:0033770,MONDO:MONDO:0005036,MedGen:C0278701|Human Phenotype Ontology:HP:0032241,MONDO:MONDO:0021230,MeSH:D002583,MedGen:C0007873|Human Phenotype Ontology:HP:0011459,MONDO:MONDO:0019086,MedGen:C0152018,Orphanet:70482|Human Phenotype Ontology:HP:0030692,MONDO:MONDO:0021211,MeSH:D001932,MedGen:C0006118|MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524] | |
132_LYS | ARG |
ClinVar chr17:7578535 |
rs1057519996
|
Pathogenic | - | Neoplasm of brain|Transitional cell carcinoma of the bladder|Uterine carcinosarcoma|Multiple myeloma|Adrenal cortex carcinoma|Breast neoplasm|Gastric adenocarcinoma|Ovarian serous cystadenocarcinoma|Carcinoma of esophagus|Squamous cell carcinoma of the head and neck|Neoplasm of uterine cervix|Pancreatic adenocarcinoma|Glioblastoma|Lung adenocarcinoma|Li-Fraumeni syndrome|Neoplasm of the large intestine|Squamous cell lung carcinoma|Neoplasm of ovary|Hereditary cancer-predisposing syndrome [Human Phenotype Ontology:HP:0030692,MONDO:MONDO:0021211,MeSH:D001932,MedGen:C0006118|Human Phenotype Ontology:HP:0006740,MONDO:MONDO:0005611,MedGen:C0279680|MONDO:MONDO:0006485,MedGen:C0280630|Human Phenotype Ontology:HP:0006775,MONDO:MONDO:0009693,MeSH:D009101,MedGen:C0026764,OMIM:254500,Orphanet:29073,Orphanet:85443|Human Phenotype Ontology:HP:0002889,Human Phenotype Ontology:HP:0006744,Human Phenotype Ontology:HP:0006759,MONDO:MONDO:0006639,MeSH:D018268,MedGen:C0206686,Orphanet:1501|Human Phenotype Ontology:HP:0010623,Human Phenotype Ontology:HP:0100013,MONDO:MONDO:0021100,MeSH:D001943,MedGen:C1458155|Human Phenotype Ontology:HP:0033770,MONDO:MONDO:0005036,MedGen:C0278701|MONDO:MONDO:0006046,MedGen:C0279663|Human Phenotype Ontology:HP:0011459,MONDO:MONDO:0019086,MedGen:C0152018,Orphanet:70482|MONDO:MONDO:0010150,MeSH:D000077195,MedGen:C1168401,OMIM:275355,Orphanet:67037|Human Phenotype Ontology:HP:0032241,MONDO:MONDO:0021230,MeSH:D002583,MedGen:C0007873|Human Phenotype Ontology:HP:0006725,MONDO:MONDO:0006047,MedGen:C0281361|MONDO:MONDO:0018177,MeSH:D005909,MedGen:C0017636,Orphanet:360|Human Phenotype Ontology:HP:0030078,MONDO:MONDO:0005061,MeSH:D000077192,MedGen:C0152013|MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|Human Phenotype Ontology:HP:0030359,MONDO:MONDO:0005097,MedGen:C0149782|Human Phenotype Ontology:HP:0100615,MONDO:MONDO:0021068,MeSH:D010051,MedGen:C0919267,OMIM:167000|MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162] | |
132_LYS | GLU |
ClinVar chr17:7578536 |
rs747342068
|
Pathogenic/Likely pathogenic | - | Ovarian serous cystadenocarcinoma|Neoplasm of the large intestine|Squamous cell carcinoma of the head and neck|Breast neoplasm|Transitional cell carcinoma of the bladder|Pancreatic adenocarcinoma|Neoplasm of uterine cervix|Multiple myeloma|Neoplasm of brain|Uterine carcinosarcoma|Lung adenocarcinoma|Gastric adenocarcinoma|Carcinoma of esophagus|Adrenal cortex carcinoma|Squamous cell lung carcinoma|Glioblastoma|Li-Fraumeni syndrome|Hereditary cancer-predisposing syndrome|Li-Fraumeni syndrome 1 [MONDO:MONDO:0006046,MedGen:C0279663|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|MONDO:MONDO:0010150,MeSH:D000077195,MedGen:C1168401,OMIM:275355,Orphanet:67037|Human Phenotype Ontology:HP:0010623,Human Phenotype Ontology:HP:0100013,MONDO:MONDO:0021100,MeSH:D001943,MedGen:C1458155|Human Phenotype Ontology:HP:0006740,MONDO:MONDO:0005611,MedGen:C0279680|Human Phenotype Ontology:HP:0006725,MONDO:MONDO:0006047,MedGen:C0281361|Human Phenotype Ontology:HP:0032241,MONDO:MONDO:0021230,MeSH:D002583,MedGen:C0007873|Human Phenotype Ontology:HP:0006775,MONDO:MONDO:0009693,MeSH:D009101,MedGen:C0026764,OMIM:254500,Orphanet:29073,Orphanet:85443|Human Phenotype Ontology:HP:0030692,MONDO:MONDO:0021211,MeSH:D001932,MedGen:C0006118|MONDO:MONDO:0006485,MedGen:C0280630|Human Phenotype Ontology:HP:0030078,MONDO:MONDO:0005061,MeSH:D000077192,MedGen:C0152013|Human Phenotype Ontology:HP:0033770,MONDO:MONDO:0005036,MedGen:C0278701|Human Phenotype Ontology:HP:0011459,MONDO:MONDO:0019086,MedGen:C0152018,Orphanet:70482|Human Phenotype Ontology:HP:0002889,Human Phenotype Ontology:HP:0006744,Human Phenotype Ontology:HP:0006759,MONDO:MONDO:0006639,MeSH:D018268,MedGen:C0206686,Orphanet:1501|Human Phenotype Ontology:HP:0030359,MONDO:MONDO:0005097,MedGen:C0149782|MONDO:MONDO:0018177,MeSH:D005909,MedGen:C0017636,Orphanet:360|MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524|MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162|Gene:553989,MedGen:C1835398,OMIM:151623,Orphanet:524] | |
132_LYS | ASN |
ClinVar chr17:7578534 |
rs866775781
|
Pathogenic/Likely pathogenic | - | Neoplasm of ovary|Li-Fraumeni syndrome|not provided [Human Phenotype Ontology:HP:0100615,MONDO:MONDO:0021068,MeSH:D010051,MedGen:C0919267,OMIM:167000|MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524|MedGen:C3661900] | |
132_LYS | TER |
ClinVar chr17:7578536 |
-
|
Pathogenic | - | Li-Fraumeni syndrome [MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524] | |
133_MET | THR | VAR_005875 |
rs28934873
|
LP/P | - | Li-Fraumeni syndrome (LFS) [MIM:151623] | |
133_MET | ILE | VAR_044744 |
rs1064795139
|
US | - | Sporadic cancers | |
133_MET | LYS | VAR_044745 |
-
|
US | - | Sporadic cancers | |
133_MET | LEU | VAR_044746 |
-
|
US | - | Sporadic cancers | |
133_MET | ARG | VAR_044747 |
-
|
LP/P | - | Li-Fraumeni syndrome (LFS) [MIM:151623] | |
133_MET | VAL | VAR_044748 |
rs1057280220
|
US | - | Sporadic cancers | |
133_MET | THR |
ClinVar chr17:7578532 |
rs28934873
|
Pathogenic | - | Li-Fraumeni syndrome 1|Hereditary cancer-predisposing syndrome|Li-Fraumeni syndrome [Gene:553989,MedGen:C1835398,OMIM:151623,Orphanet:524|MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162|MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524] | |
133_MET | LYS |
ClinVar chr17:7578532 |
-
|
Likely pathogenic | - | Breast carcinoma [Human Phenotype Ontology:HP:0003002,MONDO:MONDO:0004989,MedGen:C0678222] | |
134_PHE | LEU | VAR_036504 |
rs267605077
|
US | - | Sporadic cancers | |
134_PHE | CYS | VAR_044749 |
rs780442292
|
US | - | Sporadic cancers | |
134_PHE | ILE | VAR_044750 |
-
|
US | - | Sporadic cancers | |
134_PHE | SER | VAR_044751 |
-
|
US | - | Sporadic cancers | |
134_PHE | VAL | VAR_044752 |
-
|
US | - | Sporadic cancers | |
134_PHE | CYS |
ClinVar chr17:7578529 |
rs780442292
|
Likely pathogenic | - | Hereditary cancer-predisposing syndrome|not provided [MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162|MedGen:C3661900] | |
134_PHE | ILE |
ClinVar chr17:7578530 |
rs267605077
|
Pathogenic | - | Hereditary cancer-predisposing syndrome [MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162] | |
135_CYS | SER | VAR_005876 |
rs1057519975
|
US | - | Sporadic cancers | |
135_CYS | PHE | VAR_005877 |
rs587781991
|
US | - | Sporadic cancers | |
135_CYS | GLY | VAR_044753 |
rs1057519975
|
US | - | Sporadic cancers | |
135_CYS | ARG | VAR_044754 |
rs1057519975
|
US | - | Sporadic cancers | |
135_CYS | TRP | VAR_044755 |
rs1057519976
|
US | - | Sporadic cancers | |
135_CYS | TYR | VAR_044756 |
rs587781991
|
US | - | Sporadic cancers | |
135_CYS | THR | VAR_045792 |
-
|
US | - | A sporadic cancer | |
135_CYS | PHE |
ClinVar chr17:7578526 |
rs587781991
|
Pathogenic | - | Neoplasm of brain|Prostate adenocarcinoma|Adrenal cortex carcinoma|Neoplasm of the large intestine|Carcinoma of esophagus|Lung adenocarcinoma|Breast neoplasm|Ovarian serous cystadenocarcinoma|Gastric adenocarcinoma|Pancreatic adenocarcinoma|Squamous cell lung carcinoma|Hereditary cancer-predisposing syndrome|Hepatocellular carcinoma|Transitional cell carcinoma of the bladder|Li-Fraumeni syndrome [Human Phenotype Ontology:HP:0030692,MONDO:MONDO:0021211,MeSH:D001932,MedGen:C0006118|MONDO:MONDO:0005082,MedGen:C0007112|Human Phenotype Ontology:HP:0002889,Human Phenotype Ontology:HP:0006744,Human Phenotype Ontology:HP:0006759,MONDO:MONDO:0006639,MeSH:D018268,MedGen:C0206686,Orphanet:1501|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|Human Phenotype Ontology:HP:0011459,MONDO:MONDO:0019086,MedGen:C0152018,Orphanet:70482|Human Phenotype Ontology:HP:0030078,MONDO:MONDO:0005061,MeSH:D000077192,MedGen:C0152013|Human Phenotype Ontology:HP:0010623,Human Phenotype Ontology:HP:0100013,MONDO:MONDO:0021100,MeSH:D001943,MedGen:C1458155|MONDO:MONDO:0006046,MedGen:C0279663|Human Phenotype Ontology:HP:0033770,MONDO:MONDO:0005036,MedGen:C0278701|Human Phenotype Ontology:HP:0006725,MONDO:MONDO:0006047,MedGen:C0281361|Human Phenotype Ontology:HP:0030359,MONDO:MONDO:0005097,MedGen:C0149782|MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162|Human Phenotype Ontology:HP:0001402,Human Phenotype Ontology:HP:0002899,Human Phenotype Ontology:HP:0003007,Human Phenotype Ontology:HP:0006750,MONDO:MONDO:0007256,MedGen:C2239176,OMIM:114550,Orphanet:88673|Human Phenotype Ontology:HP:0006740,MONDO:MONDO:0005611,MedGen:C0279680|MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524] | |
135_CYS | ARG |
ClinVar chr17:7578527 |
rs1057519975
|
Pathogenic | - | Neoplasm of brain|Prostate adenocarcinoma|Lung adenocarcinoma|Breast neoplasm|Adrenal cortex carcinoma|Carcinoma of esophagus|Hepatocellular carcinoma|Pancreatic adenocarcinoma|Neoplasm of the large intestine|Transitional cell carcinoma of the bladder|Gastric adenocarcinoma|Ovarian serous cystadenocarcinoma|Squamous cell lung carcinoma|Li-Fraumeni syndrome [Human Phenotype Ontology:HP:0030692,MONDO:MONDO:0021211,MeSH:D001932,MedGen:C0006118|MONDO:MONDO:0005082,MedGen:C0007112|Human Phenotype Ontology:HP:0030078,MONDO:MONDO:0005061,MeSH:D000077192,MedGen:C0152013|Human Phenotype Ontology:HP:0010623,Human Phenotype Ontology:HP:0100013,MONDO:MONDO:0021100,MeSH:D001943,MedGen:C1458155|Human Phenotype Ontology:HP:0002889,Human Phenotype Ontology:HP:0006744,Human Phenotype Ontology:HP:0006759,MONDO:MONDO:0006639,MeSH:D018268,MedGen:C0206686,Orphanet:1501|Human Phenotype Ontology:HP:0011459,MONDO:MONDO:0019086,MedGen:C0152018,Orphanet:70482|Human Phenotype Ontology:HP:0001402,Human Phenotype Ontology:HP:0002899,Human Phenotype Ontology:HP:0003007,Human Phenotype Ontology:HP:0006750,MONDO:MONDO:0007256,MedGen:C2239176,OMIM:114550,Orphanet:88673|Human Phenotype Ontology:HP:0006725,MONDO:MONDO:0006047,MedGen:C0281361|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|Human Phenotype Ontology:HP:0006740,MONDO:MONDO:0005611,MedGen:C0279680|Human Phenotype Ontology:HP:0033770,MONDO:MONDO:0005036,MedGen:C0278701|MONDO:MONDO:0006046,MedGen:C0279663|Human Phenotype Ontology:HP:0030359,MONDO:MONDO:0005097,MedGen:C0149782|MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524] | |
135_CYS | GLY |
ClinVar chr17:7578527 |
rs1057519975
|
Likely pathogenic | - | Neoplasm of the large intestine|Prostate adenocarcinoma|Squamous cell lung carcinoma|Gastric adenocarcinoma|Carcinoma of esophagus|Ovarian serous cystadenocarcinoma|Transitional cell carcinoma of the bladder|Adrenal cortex carcinoma|Pancreatic adenocarcinoma|Lung adenocarcinoma|Breast neoplasm|Neoplasm of brain|Hepatocellular carcinoma|Hereditary cancer-predisposing syndrome|Li-Fraumeni syndrome|Neoplasm of ovary [Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|MONDO:MONDO:0005082,MedGen:C0007112|Human Phenotype Ontology:HP:0030359,MONDO:MONDO:0005097,MedGen:C0149782|Human Phenotype Ontology:HP:0033770,MONDO:MONDO:0005036,MedGen:C0278701|Human Phenotype Ontology:HP:0011459,MONDO:MONDO:0019086,MedGen:C0152018,Orphanet:70482|MONDO:MONDO:0006046,MedGen:C0279663|Human Phenotype Ontology:HP:0006740,MONDO:MONDO:0005611,MedGen:C0279680|Human Phenotype Ontology:HP:0002889,Human Phenotype Ontology:HP:0006744,Human Phenotype Ontology:HP:0006759,MONDO:MONDO:0006639,MeSH:D018268,MedGen:C0206686,Orphanet:1501|Human Phenotype Ontology:HP:0006725,MONDO:MONDO:0006047,MedGen:C0281361|Human Phenotype Ontology:HP:0030078,MONDO:MONDO:0005061,MeSH:D000077192,MedGen:C0152013|Human Phenotype Ontology:HP:0010623,Human Phenotype Ontology:HP:0100013,MONDO:MONDO:0021100,MeSH:D001943,MedGen:C1458155|Human Phenotype Ontology:HP:0030692,MONDO:MONDO:0021211,MeSH:D001932,MedGen:C0006118|Human Phenotype Ontology:HP:0001402,Human Phenotype Ontology:HP:0002899,Human Phenotype Ontology:HP:0003007,Human Phenotype Ontology:HP:0006750,MONDO:MONDO:0007256,MedGen:C2239176,OMIM:114550,Orphanet:88673|MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162|MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524|Human Phenotype Ontology:HP:0100615,MONDO:MONDO:0021068,MeSH:D010051,MedGen:C0919267,OMIM:167000] | |
136_GLN | GLU | VAR_005878 |
rs1555526268
|
US | - | Sporadic cancers | |
136_GLN | LYS | VAR_005879 |
-
|
US | - | A sporadic cancer | |
136_GLN | HIS | VAR_044757 |
rs758781593
|
US | - | Sporadic cancers | |
136_GLN | PRO | VAR_044758 |
-
|
US | - | Sporadic cancers | |
136_GLN | ARG | VAR_044759 |
-
|
US | - | Sporadic cancers | |
136_GLN | TER |
ClinVar chr17:7578524 |
-
|
Pathogenic | - | Li-Fraumeni syndrome|Adrenocortical carcinoma, hereditary [MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524|MONDO:MONDO:0008734,MedGen:C1859972,OMIM:202300,Orphanet:1501] | |
137_LEU | GLN | VAR_005880 |
-
|
US | - | Sporadic cancers | |
137_LEU | MET | VAR_044760 |
-
|
US | - | Sporadic cancers | |
137_LEU | PRO | VAR_044761 |
-
|
US | - | Sporadic cancers | |
137_LEU | VAL | VAR_044762 |
-
|
US | - | Sporadic cancers | |
138_ALA | PRO | VAR_005881 |
rs28934875
|
LP/P | - | Li-Fraumeni syndrome (LFS) [MIM:151623] | |
138_ALA | VAL | VAR_033034 |
rs750600586
|
US | - | Sporadic cancers | |
138_ALA | ASP | VAR_044763 |
-
|
US | - | Sporadic cancers | |
138_ALA | SER | VAR_044764 |
-
|
LP/P | - | Li-Fraumeni syndrome (LFS) [MIM:151623] | |
138_ALA | THR | VAR_044765 |
-
|
US | - | Sporadic cancers | |
138_ALA | PRO |
ClinVar chr17:7578518 |
rs28934875
|
Pathogenic/Likely pathogenic | - | Li-Fraumeni syndrome 1|Li-Fraumeni syndrome|Hereditary cancer-predisposing syndrome [Gene:553989,MedGen:C1835398,OMIM:151623,Orphanet:524|MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524|MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162] | |
139_LYS | ASN | VAR_005882 |
-
|
US | - | Sporadic cancers | |
139_LYS | GLU | VAR_044766 |
rs1212996409
|
US | - | Sporadic cancers | |
139_LYS | GLN | VAR_044767 |
-
|
US | - | Sporadic cancers | |
139_LYS | ARG | VAR_044768 |
-
|
US | - | Sporadic cancers | |
139_LYS | THR | VAR_044769 |
-
|
US | - | Sporadic cancers | |
139_LYS | TER |
ClinVar chr17:7578515 |
rs1212996409
|
Pathogenic | - | Neoplasm of ovary [Human Phenotype Ontology:HP:0100615,MONDO:MONDO:0021068,MeSH:D010051,MedGen:C0919267,OMIM:167000] | |
140_THR | ALA | VAR_044770 |
-
|
US | - | Sporadic cancers | |
140_THR | ILE | VAR_044771 |
-
|
US | - | Sporadic cancers | |
140_THR | ASN | VAR_044772 |
rs786202561
|
US | - | A sporadic cancer | |
140_THR | PRO | VAR_044773 |
-
|
US | - | A sporadic cancer | |
140_THR | SER | VAR_044774 |
-
|
US | - | Sporadic cancers | |
141_CYS | GLY | VAR_005884 |
rs1057519978
|
US | - | Sporadic cancers | |
141_CYS | PHE | VAR_005885 |
rs587781288
|
US | - | Sporadic cancers | |
141_CYS | TYR | VAR_005886 |
rs587781288
|
LP/P | - | Li-Fraumeni syndrome (LFS) [MIM:151623] | |
141_CYS | ARG | VAR_044775 |
rs1057519978
|
US | - | Sporadic cancers | |
141_CYS | SER | VAR_044776 |
rs1057519978
|
US | - | Sporadic cancers | |
141_CYS | TRP | VAR_044777 |
rs1057519977
|
US | - | Sporadic cancers | |
141_CYS | ALA | VAR_045793 |
-
|
US | - | A sporadic cancer | |
141_CYS | TYR |
ClinVar chr17:7578508 |
rs587781288
|
Pathogenic | - | Hereditary cancer-predisposing syndrome|Squamous cell carcinoma of the head and neck|Papillary renal cell carcinoma type 1|Neoplasm of the large intestine|Squamous cell lung carcinoma|Malignant neoplasm of body of uterus|Lung adenocarcinoma|Prostate adenocarcinoma|Acute myeloid leukemia|Li-Fraumeni syndrome|Pancreatic adenocarcinoma|Breast neoplasm|Neoplasm of brain|Multiple myeloma|Neoplasm of ovary|not provided|Li-Fraumeni syndrome 1 [MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162|MONDO:MONDO:0010150,MeSH:D000077195,MedGen:C1168401,OMIM:275355,Orphanet:67037|Human Phenotype Ontology:HP:0011797,MedGen:C1336839,OMIM:605074,Orphanet:47044|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|Human Phenotype Ontology:HP:0030359,MONDO:MONDO:0005097,MedGen:C0149782|MedGen:C0153574|Human Phenotype Ontology:HP:0030078,MONDO:MONDO:0005061,MeSH:D000077192,MedGen:C0152013|MONDO:MONDO:0005082,MedGen:C0007112|Human Phenotype Ontology:HP:0001914,Human Phenotype Ontology:HP:0004808,Human Phenotype Ontology:HP:0004843,Human Phenotype Ontology:HP:0005516,Human Phenotype Ontology:HP:0006724,Human Phenotype Ontology:HP:0006728,MONDO:MONDO:0018874,MeSH:D015470,MedGen:C0023467,OMIM:601626,Orphanet:519|MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524|Human Phenotype Ontology:HP:0006725,MONDO:MONDO:0006047,MedGen:C0281361|Human Phenotype Ontology:HP:0010623,Human Phenotype Ontology:HP:0100013,MONDO:MONDO:0021100,MeSH:D001943,MedGen:C1458155|Human Phenotype Ontology:HP:0030692,MONDO:MONDO:0021211,MeSH:D001932,MedGen:C0006118|Human Phenotype Ontology:HP:0006775,MONDO:MONDO:0009693,MeSH:D009101,MedGen:C0026764,OMIM:254500,Orphanet:29073,Orphanet:85443|Human Phenotype Ontology:HP:0100615,MONDO:MONDO:0021068,MeSH:D010051,MedGen:C0919267,OMIM:167000|MedGen:C3661900|Gene:553989,MedGen:C1835398,OMIM:151623,Orphanet:524] | |
141_CYS | TRP |
ClinVar chr17:7578507 |
rs1057519977
|
Pathogenic/Likely pathogenic | - | Acute myeloid leukemia|Squamous cell lung carcinoma|Neoplasm of the large intestine|Breast neoplasm|Multiple myeloma|Malignant neoplasm of body of uterus|Pancreatic adenocarcinoma|Papillary renal cell carcinoma type 1|Prostate adenocarcinoma|Li-Fraumeni syndrome|Hereditary cancer-predisposing syndrome|Neoplasm of brain|Lung adenocarcinoma|Squamous cell carcinoma of the head and neck [Human Phenotype Ontology:HP:0001914,Human Phenotype Ontology:HP:0004808,Human Phenotype Ontology:HP:0004843,Human Phenotype Ontology:HP:0005516,Human Phenotype Ontology:HP:0006724,Human Phenotype Ontology:HP:0006728,MONDO:MONDO:0018874,MeSH:D015470,MedGen:C0023467,OMIM:601626,Orphanet:519|Human Phenotype Ontology:HP:0030359,MONDO:MONDO:0005097,MedGen:C0149782|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|Human Phenotype Ontology:HP:0010623,Human Phenotype Ontology:HP:0100013,MONDO:MONDO:0021100,MeSH:D001943,MedGen:C1458155|Human Phenotype Ontology:HP:0006775,MONDO:MONDO:0009693,MeSH:D009101,MedGen:C0026764,OMIM:254500,Orphanet:29073,Orphanet:85443|MedGen:C0153574|Human Phenotype Ontology:HP:0006725,MONDO:MONDO:0006047,MedGen:C0281361|Human Phenotype Ontology:HP:0011797,MedGen:C1336839,OMIM:605074,Orphanet:47044|MONDO:MONDO:0005082,MedGen:C0007112|MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524|MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162|Human Phenotype Ontology:HP:0030692,MONDO:MONDO:0021211,MeSH:D001932,MedGen:C0006118|Human Phenotype Ontology:HP:0030078,MONDO:MONDO:0005061,MeSH:D000077192,MedGen:C0152013|MONDO:MONDO:0010150,MeSH:D000077195,MedGen:C1168401,OMIM:275355,Orphanet:67037] | |
141_CYS | GLY |
ClinVar chr17:7578509 |
rs1057519978
|
Likely pathogenic | - | Acute myeloid leukemia|Neoplasm of the large intestine|Lung adenocarcinoma|Multiple myeloma|Pancreatic adenocarcinoma|Squamous cell carcinoma of the head and neck|Malignant neoplasm of body of uterus|Breast neoplasm|Papillary renal cell carcinoma type 1|Prostate adenocarcinoma|Squamous cell lung carcinoma|Neoplasm of brain [Human Phenotype Ontology:HP:0001914,Human Phenotype Ontology:HP:0004808,Human Phenotype Ontology:HP:0004843,Human Phenotype Ontology:HP:0005516,Human Phenotype Ontology:HP:0006724,Human Phenotype Ontology:HP:0006728,MONDO:MONDO:0018874,MeSH:D015470,MedGen:C0023467,OMIM:601626,Orphanet:519|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|Human Phenotype Ontology:HP:0030078,MONDO:MONDO:0005061,MeSH:D000077192,MedGen:C0152013|Human Phenotype Ontology:HP:0006775,MONDO:MONDO:0009693,MeSH:D009101,MedGen:C0026764,OMIM:254500,Orphanet:29073,Orphanet:85443|Human Phenotype Ontology:HP:0006725,MONDO:MONDO:0006047,MedGen:C0281361|MONDO:MONDO:0010150,MeSH:D000077195,MedGen:C1168401,OMIM:275355,Orphanet:67037|MedGen:C0153574|Human Phenotype Ontology:HP:0010623,Human Phenotype Ontology:HP:0100013,MONDO:MONDO:0021100,MeSH:D001943,MedGen:C1458155|Human Phenotype Ontology:HP:0011797,MedGen:C1336839,OMIM:605074,Orphanet:47044|MONDO:MONDO:0005082,MedGen:C0007112|Human Phenotype Ontology:HP:0030359,MONDO:MONDO:0005097,MedGen:C0149782|Human Phenotype Ontology:HP:0030692,MONDO:MONDO:0021211,MeSH:D001932,MedGen:C0006118] | |
141_CYS | SER |
ClinVar chr17:7578509 |
rs1057519978
|
Likely pathogenic | - | Breast neoplasm|Papillary renal cell carcinoma type 1|Malignant neoplasm of body of uterus|Neoplasm of brain|Squamous cell carcinoma of the head and neck|Acute myeloid leukemia|Lung adenocarcinoma|Pancreatic adenocarcinoma|Neoplasm of the large intestine|Prostate adenocarcinoma|Squamous cell lung carcinoma|Multiple myeloma [Human Phenotype Ontology:HP:0010623,Human Phenotype Ontology:HP:0100013,MONDO:MONDO:0021100,MeSH:D001943,MedGen:C1458155|Human Phenotype Ontology:HP:0011797,MedGen:C1336839,OMIM:605074,Orphanet:47044|MedGen:C0153574|Human Phenotype Ontology:HP:0030692,MONDO:MONDO:0021211,MeSH:D001932,MedGen:C0006118|MONDO:MONDO:0010150,MeSH:D000077195,MedGen:C1168401,OMIM:275355,Orphanet:67037|Human Phenotype Ontology:HP:0001914,Human Phenotype Ontology:HP:0004808,Human Phenotype Ontology:HP:0004843,Human Phenotype Ontology:HP:0005516,Human Phenotype Ontology:HP:0006724,Human Phenotype Ontology:HP:0006728,MONDO:MONDO:0018874,MeSH:D015470,MedGen:C0023467,OMIM:601626,Orphanet:519|Human Phenotype Ontology:HP:0030078,MONDO:MONDO:0005061,MeSH:D000077192,MedGen:C0152013|Human Phenotype Ontology:HP:0006725,MONDO:MONDO:0006047,MedGen:C0281361|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|MONDO:MONDO:0005082,MedGen:C0007112|Human Phenotype Ontology:HP:0030359,MONDO:MONDO:0005097,MedGen:C0149782|Human Phenotype Ontology:HP:0006775,MONDO:MONDO:0009693,MeSH:D009101,MedGen:C0026764,OMIM:254500,Orphanet:29073,Orphanet:85443] | |
142_PRO | ALA | VAR_044778 |
-
|
US | - | Sporadic cancers | |
142_PRO | HIS | VAR_044779 |
-
|
US | - | Sporadic cancers | |
142_PRO | LEU | VAR_044780 |
rs779196500
|
US | - | Sporadic cancers | |
142_PRO | ARG | VAR_044781 |
-
|
US | - | A sporadic cancer | |
142_PRO | SER | VAR_044782 |
-
|
US | - | Sporadic cancers | |
142_PRO | THR | VAR_044783 |
-
|
US | - | Sporadic cancers | |
142_PRO | PHE | VAR_045794 |
-
|
US | - | Sporadic cancers | |
143_VAL | ALA | VAR_005887 |
-
|
US | - | Sporadic cancers | |
143_VAL | GLU | VAR_044784 |
-
|
US | - | Sporadic cancers | |
143_VAL | GLY | VAR_044785 |
rs1555526241
|
US | - | Sporadic cancers | |
143_VAL | LEU | VAR_044786 |
rs587782620
|
US | - | Sporadic cancers | |
143_VAL | MET | VAR_044787 |
rs587782620
|
US | - | Sporadic cancers | |
143_VAL | ALA |
ClinVar chr17:7578502 |
rs1555526241
|
Likely pathogenic | - | Li-Fraumeni syndrome [MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524] | |
144_GLN | PRO | VAR_005888 |
rs786203071
|
US | - | Sporadic cancers | |
144_GLN | HIS | VAR_044788 |
rs786201419
|
US | - | Sporadic cancers | |
144_GLN | LYS | VAR_044789 |
-
|
US | - | Sporadic cancers | |
144_GLN | LEU | VAR_044790 |
rs786203071
|
LP/P | - | Li-Fraumeni syndrome (LFS) [MIM:151623] | |
144_GLN | ARG | VAR_044791 |
-
|
US | - | Sporadic cancers | |
144_GLN | TER |
ClinVar chr17:7578500 |
rs757274881
|
Pathogenic | - | Neoplasm of ovary|Li-Fraumeni syndrome|Hereditary cancer-predisposing syndrome|Li-Fraumeni syndrome 1 [Human Phenotype Ontology:HP:0100615,MONDO:MONDO:0021068,MeSH:D010051,MedGen:C0919267,OMIM:167000|MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524|MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162|Gene:553989,MedGen:C1835398,OMIM:151623,Orphanet:524] | |
145_LEU | PRO | VAR_005889 |
rs587782197
|
US | - | Sporadic cancers | |
145_LEU | GLN | VAR_005890 |
-
|
US | - | Sporadic cancers | |
145_LEU | MET | VAR_044792 |
-
|
US | - | Sporadic cancers | |
145_LEU | ARG | VAR_044793 |
-
|
US | - | Sporadic cancers | |
145_LEU | VAL | VAR_044794 |
-
|
US | - | Sporadic cancers | |
146_TRP | CYS | VAR_044795 |
-
|
US | - | A sporadic cancer | |
146_TRP | GLY | VAR_044796 |
rs786203064
|
US | - | Sporadic cancers | |
146_TRP | LEU | VAR_044797 |
-
|
US | - | Sporadic cancers | |
146_TRP | ARG | VAR_044798 |
-
|
US | - | Sporadic cancers | |
146_TRP | SER | VAR_044799 |
-
|
US | - | Sporadic cancers | |
146_TRP | TER |
ClinVar chr17:7578492 |
rs1131691026
|
Pathogenic | - | Hereditary cancer-predisposing syndrome|Li-Fraumeni syndrome|Neoplasm of ovary|Li-Fraumeni syndrome 1 [MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162|MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524|Human Phenotype Ontology:HP:0100615,MONDO:MONDO:0021068,MeSH:D010051,MedGen:C0919267,OMIM:167000|Gene:553989,MedGen:C1835398,OMIM:151623,Orphanet:524] | |
146_TRP | TER |
ClinVar chr17:7578493 |
rs1206165503
|
Pathogenic | - | Neoplasm of ovary|Hereditary cancer-predisposing syndrome|Li-Fraumeni syndrome|Li-Fraumeni syndrome 1 [Human Phenotype Ontology:HP:0100615,MONDO:MONDO:0021068,MeSH:D010051,MedGen:C0919267,OMIM:167000|MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162|MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524|Gene:553989,MedGen:C1835398,OMIM:151623,Orphanet:524] | |
147_VAL | ASP | VAR_005891 |
-
|
US | - | Sporadic cancers | |
147_VAL | GLY | VAR_005892 |
rs1453167097
|
US | - | Sporadic cancers | |
147_VAL | ALA | VAR_044800 |
-
|
US | - | Sporadic cancers | |
147_VAL | GLU | VAR_044801 |
-
|
US | - | Sporadic cancers | |
147_VAL | PHE | VAR_044802 |
-
|
US | - | A sporadic cancer | |
147_VAL | ILE | VAR_044803 |
rs1555526226
|
US | - | Sporadic cancers | |
148_ASP | ALA | VAR_044804 |
rs1046611742
|
US | - | A sporadic cancer | |
148_ASP | GLU | VAR_044805 |
-
|
US | - | Sporadic cancers | |
148_ASP | GLY | VAR_044806 |
-
|
US | - | A sporadic cancer | |
148_ASP | ASN | VAR_044807 |
-
|
US | - | Sporadic cancers | |
148_ASP | VAL | VAR_044808 |
-
|
US | - | Sporadic cancers | |
148_ASP | TYR | VAR_044809 |
rs1131691007
|
US | - | Sporadic cancers | |
149_SER | PRO | VAR_005893 |
-
|
US | - | Sporadic cancers | |
149_SER | PHE | VAR_044810 |
rs1555526214
|
US | - | Sporadic cancers | |
149_SER | THR | VAR_044811 |
-
|
US | - | Sporadic cancers | |
150_THR | ALA | VAR_044812 |
-
|
US | - | A sporadic cancer | |
150_THR | ILE | VAR_044813 |
-
|
US | - | Sporadic cancers | |
150_THR | LYS | VAR_044814 |
-
|
US | - | Sporadic cancers | |
150_THR | ASN | VAR_044815 |
-
|
US | - | A sporadic cancer | |
150_THR | PRO | VAR_044816 |
-
|
US | - | A sporadic cancer | |
150_THR | ARG | VAR_044817 |
-
|
US | - | A sporadic cancer | |
151_PRO | ALA | VAR_005894 |
rs28934874
|
US | - | Sporadic cancers | |
151_PRO | SER | VAR_005895 |
rs28934874
|
LP/P | - | Li-Fraumeni syndrome (LFS) [MIM:151623] | |
151_PRO | THR | VAR_005896 |
rs28934874
|
LP/P | - | Li-Fraumeni syndrome (LFS) [MIM:151623] | |
151_PRO | HIS | VAR_044818 |
rs1057520000
|
US | - | Sporadic cancers | |
151_PRO | LEU | VAR_044819 |
-
|
US | - | Sporadic cancers | |
151_PRO | ARG | VAR_044820 |
rs1057520000
|
US | - | Sporadic cancers | |
151_PRO | THR |
ClinVar chr17:7578479 |
rs28934874
|
Pathogenic/Likely pathogenic | - | Breast adenocarcinoma|Hereditary cancer-predisposing syndrome|Squamous cell lung carcinoma|Ovarian serous cystadenocarcinoma|Carcinoma of esophagus|Multiple myeloma|Adenoid cystic carcinoma|Neoplasm of brain|Malignant melanoma of skin|Transitional cell carcinoma of the bladder|Gastric adenocarcinoma|Pancreatic adenocarcinoma|Breast neoplasm|Neoplasm of the large intestine|Squamous cell carcinoma of the head and neck|Lung adenocarcinoma|Uterine carcinosarcoma|Hepatocellular carcinoma|Malignant neoplasm of body of uterus|not provided|Li-Fraumeni syndrome|Rhabdomyosarcoma|Li-Fraumeni syndrome 1 [MONDO:MONDO:0004988,MedGen:C0858252|MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162|Human Phenotype Ontology:HP:0030359,MONDO:MONDO:0005097,MedGen:C0149782|MONDO:MONDO:0006046,MedGen:C0279663|Human Phenotype Ontology:HP:0011459,MONDO:MONDO:0019086,MedGen:C0152018,Orphanet:70482|Human Phenotype Ontology:HP:0006775,MONDO:MONDO:0009693,MeSH:D009101,MedGen:C0026764,OMIM:254500,Orphanet:29073,Orphanet:85443|MONDO:MONDO:0004971,MeSH:D003528,MedGen:C0010606|Human Phenotype Ontology:HP:0030692,MONDO:MONDO:0021211,MeSH:D001932,MedGen:C0006118|Human Phenotype Ontology:HP:0012056,MONDO:MONDO:0005012,MeSH:C562393,MedGen:C0151779|Human Phenotype Ontology:HP:0006740,MONDO:MONDO:0005611,MedGen:C0279680|Human Phenotype Ontology:HP:0033770,MONDO:MONDO:0005036,MedGen:C0278701|Human Phenotype Ontology:HP:0006725,MONDO:MONDO:0006047,MedGen:C0281361|Human Phenotype Ontology:HP:0010623,Human Phenotype Ontology:HP:0100013,MONDO:MONDO:0021100,MeSH:D001943,MedGen:C1458155|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|MONDO:MONDO:0010150,MeSH:D000077195,MedGen:C1168401,OMIM:275355,Orphanet:67037|Human Phenotype Ontology:HP:0030078,MONDO:MONDO:0005061,MeSH:D000077192,MedGen:C0152013|MONDO:MONDO:0006485,MedGen:C0280630|Human Phenotype Ontology:HP:0001402,Human Phenotype Ontology:HP:0002899,Human Phenotype Ontology:HP:0003007,Human Phenotype Ontology:HP:0006750,MONDO:MONDO:0007256,MedGen:C2239176,OMIM:114550,Orphanet:88673|MedGen:C0153574|MedGen:C3661900|MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524|Human Phenotype Ontology:HP:0002859,MONDO:MONDO:0005212,MeSH:D012208,MedGen:C0035412,Orphanet:780|Gene:553989,MedGen:C1835398,OMIM:151623,Orphanet:524] | |
151_PRO | SER |
ClinVar chr17:7578479 |
rs28934874
|
Pathogenic/Likely pathogenic | - | Breast adenocarcinoma|not provided|Hereditary cancer-predisposing syndrome|Carcinoma of esophagus|Malignant neoplasm of body of uterus|Malignant melanoma of skin|Gastric adenocarcinoma|Neoplasm of the large intestine|Multiple myeloma|Ovarian serous cystadenocarcinoma|Lung adenocarcinoma|Pancreatic adenocarcinoma|Neoplasm of brain|Uterine carcinosarcoma|Adenoid cystic carcinoma|Squamous cell carcinoma of the head and neck|Squamous cell lung carcinoma|Breast neoplasm|Hepatocellular carcinoma|Transitional cell carcinoma of the bladder|Li-Fraumeni syndrome|Neoplasm of ovary|Rhabdomyosarcoma|Li-Fraumeni syndrome 1 [MONDO:MONDO:0004988,MedGen:C0858252|MedGen:C3661900|MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162|Human Phenotype Ontology:HP:0011459,MONDO:MONDO:0019086,MedGen:C0152018,Orphanet:70482|MedGen:C0153574|Human Phenotype Ontology:HP:0012056,MONDO:MONDO:0005012,MeSH:C562393,MedGen:C0151779|Human Phenotype Ontology:HP:0033770,MONDO:MONDO:0005036,MedGen:C0278701|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|Human Phenotype Ontology:HP:0006775,MONDO:MONDO:0009693,MeSH:D009101,MedGen:C0026764,OMIM:254500,Orphanet:29073,Orphanet:85443|MONDO:MONDO:0006046,MedGen:C0279663|Human Phenotype Ontology:HP:0030078,MONDO:MONDO:0005061,MeSH:D000077192,MedGen:C0152013|Human Phenotype Ontology:HP:0006725,MONDO:MONDO:0006047,MedGen:C0281361|Human Phenotype Ontology:HP:0030692,MONDO:MONDO:0021211,MeSH:D001932,MedGen:C0006118|MONDO:MONDO:0006485,MedGen:C0280630|MONDO:MONDO:0004971,MeSH:D003528,MedGen:C0010606|MONDO:MONDO:0010150,MeSH:D000077195,MedGen:C1168401,OMIM:275355,Orphanet:67037|Human Phenotype Ontology:HP:0030359,MONDO:MONDO:0005097,MedGen:C0149782|Human Phenotype Ontology:HP:0010623,Human Phenotype Ontology:HP:0100013,MONDO:MONDO:0021100,MeSH:D001943,MedGen:C1458155|Human Phenotype Ontology:HP:0001402,Human Phenotype Ontology:HP:0002899,Human Phenotype Ontology:HP:0003007,Human Phenotype Ontology:HP:0006750,MONDO:MONDO:0007256,MedGen:C2239176,OMIM:114550,Orphanet:88673|Human Phenotype Ontology:HP:0006740,MONDO:MONDO:0005611,MedGen:C0279680|MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524|Human Phenotype Ontology:HP:0100615,MONDO:MONDO:0021068,MeSH:D010051,MedGen:C0919267,OMIM:167000|Human Phenotype Ontology:HP:0002859,MONDO:MONDO:0005212,MeSH:D012208,MedGen:C0035412,Orphanet:780|Gene:553989,MedGen:C1835398,OMIM:151623,Orphanet:524] | |
151_PRO | ARG |
ClinVar chr17:7578478 |
rs1057520000
|
Pathogenic/Likely pathogenic | - | Transitional cell carcinoma of the bladder|Pancreatic adenocarcinoma|Neoplasm of the large intestine|Squamous cell carcinoma of the head and neck|Hepatocellular carcinoma|Ovarian serous cystadenocarcinoma|Gastric adenocarcinoma|Neoplasm of brain|Multiple myeloma|Uterine carcinosarcoma|Malignant neoplasm of body of uterus|Squamous cell lung carcinoma|Lung adenocarcinoma|Malignant melanoma of skin|Adenoid cystic carcinoma|Carcinoma of esophagus|Breast neoplasm|Li-Fraumeni syndrome|Hereditary cancer-predisposing syndrome [Human Phenotype Ontology:HP:0006740,MONDO:MONDO:0005611,MedGen:C0279680|Human Phenotype Ontology:HP:0006725,MONDO:MONDO:0006047,MedGen:C0281361|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|MONDO:MONDO:0010150,MeSH:D000077195,MedGen:C1168401,OMIM:275355,Orphanet:67037|Human Phenotype Ontology:HP:0001402,Human Phenotype Ontology:HP:0002899,Human Phenotype Ontology:HP:0003007,Human Phenotype Ontology:HP:0006750,MONDO:MONDO:0007256,MedGen:C2239176,OMIM:114550,Orphanet:88673|MONDO:MONDO:0006046,MedGen:C0279663|Human Phenotype Ontology:HP:0033770,MONDO:MONDO:0005036,MedGen:C0278701|Human Phenotype Ontology:HP:0030692,MONDO:MONDO:0021211,MeSH:D001932,MedGen:C0006118|Human Phenotype Ontology:HP:0006775,MONDO:MONDO:0009693,MeSH:D009101,MedGen:C0026764,OMIM:254500,Orphanet:29073,Orphanet:85443|MONDO:MONDO:0006485,MedGen:C0280630|MedGen:C0153574|Human Phenotype Ontology:HP:0030359,MONDO:MONDO:0005097,MedGen:C0149782|Human Phenotype Ontology:HP:0030078,MONDO:MONDO:0005061,MeSH:D000077192,MedGen:C0152013|Human Phenotype Ontology:HP:0012056,MONDO:MONDO:0005012,MeSH:C562393,MedGen:C0151779|MONDO:MONDO:0004971,MeSH:D003528,MedGen:C0010606|Human Phenotype Ontology:HP:0011459,MONDO:MONDO:0019086,MedGen:C0152018,Orphanet:70482|Human Phenotype Ontology:HP:0010623,Human Phenotype Ontology:HP:0100013,MONDO:MONDO:0021100,MeSH:D001943,MedGen:C1458155|MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524|MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162] | |
151_PRO | ALA |
ClinVar chr17:7578479 |
rs28934874
|
Pathogenic | - | Breast neoplasm|Uterine carcinosarcoma|Neoplasm of the large intestine|Neoplasm of brain|Hepatocellular carcinoma|Squamous cell lung carcinoma|Squamous cell carcinoma of the head and neck|Multiple myeloma|Malignant neoplasm of body of uterus|Adenoid cystic carcinoma|Carcinoma of esophagus|Pancreatic adenocarcinoma|Ovarian serous cystadenocarcinoma|Malignant melanoma of skin|Transitional cell carcinoma of the bladder|Gastric adenocarcinoma|Lung adenocarcinoma|Li-Fraumeni syndrome|Hereditary cancer-predisposing syndrome [Human Phenotype Ontology:HP:0010623,Human Phenotype Ontology:HP:0100013,MONDO:MONDO:0021100,MeSH:D001943,MedGen:C1458155|MONDO:MONDO:0006485,MedGen:C0280630|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|Human Phenotype Ontology:HP:0030692,MONDO:MONDO:0021211,MeSH:D001932,MedGen:C0006118|Human Phenotype Ontology:HP:0001402,Human Phenotype Ontology:HP:0002899,Human Phenotype Ontology:HP:0003007,Human Phenotype Ontology:HP:0006750,MONDO:MONDO:0007256,MedGen:C2239176,OMIM:114550,Orphanet:88673|Human Phenotype Ontology:HP:0030359,MONDO:MONDO:0005097,MedGen:C0149782|MONDO:MONDO:0010150,MeSH:D000077195,MedGen:C1168401,OMIM:275355,Orphanet:67037|Human Phenotype Ontology:HP:0006775,MONDO:MONDO:0009693,MeSH:D009101,MedGen:C0026764,OMIM:254500,Orphanet:29073,Orphanet:85443|MedGen:C0153574|MONDO:MONDO:0004971,MeSH:D003528,MedGen:C0010606|Human Phenotype Ontology:HP:0011459,MONDO:MONDO:0019086,MedGen:C0152018,Orphanet:70482|Human Phenotype Ontology:HP:0006725,MONDO:MONDO:0006047,MedGen:C0281361|MONDO:MONDO:0006046,MedGen:C0279663|Human Phenotype Ontology:HP:0012056,MONDO:MONDO:0005012,MeSH:C562393,MedGen:C0151779|Human Phenotype Ontology:HP:0006740,MONDO:MONDO:0005611,MedGen:C0279680|Human Phenotype Ontology:HP:0033770,MONDO:MONDO:0005036,MedGen:C0278701|Human Phenotype Ontology:HP:0030078,MONDO:MONDO:0005061,MeSH:D000077192,MedGen:C0152013|MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524|MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162] | |
152_PRO | LEU | VAR_005897 |
rs587782705
|
LP/P | - | Li-Fraumeni syndrome (LFS) [MIM:151623] | |
152_PRO | SER | VAR_005898 |
rs767328513
|
US | - | Sporadic cancers | |
152_PRO | ALA | VAR_044821 |
-
|
US | - | Sporadic cancers | |
152_PRO | GLN | VAR_044822 |
-
|
US | - | Sporadic cancers | |
152_PRO | ARG | VAR_044823 |
-
|
US | - | Sporadic cancers | |
152_PRO | THR | VAR_044824 |
-
|
US | - | Sporadic cancers | |
152_PRO | LEU |
ClinVar chr17:7578475 |
rs587782705
|
Pathogenic | - | Hereditary cancer-predisposing syndrome|Li-Fraumeni syndrome|not provided|Lip and oral cavity carcinoma|Li-Fraumeni syndrome 1|Familial cancer of breast|Squamous cell carcinoma of the head and neck|Adrenocortical carcinoma, hereditary [MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162|MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524|MedGen:C3661900|MONDO:MONDO:0023644,MedGen:C0220641|Gene:553989,MedGen:C1835398,OMIM:151623,Orphanet:524|MONDO:MONDO:0016419,MedGen:C0346153,OMIM:114480,Orphanet:227535|MONDO:MONDO:0010150,MeSH:D000077195,MedGen:C1168401,OMIM:275355,Orphanet:67037|MONDO:MONDO:0008734,MedGen:C1859972,OMIM:202300,Orphanet:1501] | |
152_PRO | ARG |
ClinVar chr17:7578475 |
rs587782705
|
Pathogenic/Likely pathogenic | - | Hereditary cancer-predisposing syndrome|Li-Fraumeni syndrome|Li-Fraumeni syndrome 1 [MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162|MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524|Gene:553989,MedGen:C1835398,OMIM:151623,Orphanet:524] | |
153_PRO | THR | VAR_005899 |
-
|
US | - | Sporadic cancers | |
153_PRO | ALA | VAR_044825 |
-
|
US | - | Sporadic cancers | |
153_PRO | HIS | VAR_044826 |
-
|
US | - | A sporadic cancer | |
153_PRO | LEU | VAR_044827 |
-
|
US | - | Sporadic cancers | |
153_PRO | ARG | VAR_044828 |
-
|
US | - | A sporadic cancer | |
153_PRO | SER | VAR_044829 |
rs1064795860
|
US | - | Sporadic cancers | |
153_PRO | PHE | VAR_045795 |
-
|
US | - | A sporadic cancer | |
154_GLY | VAL | VAR_005900 |
rs762846821
|
US | - | A brain tumor with no family history | |
154_GLY | ALA | VAR_044830 |
-
|
US | - | Sporadic cancers | |
154_GLY | CYS | VAR_044831 |
-
|
US | - | A sporadic cancer | |
154_GLY | ASP | VAR_044832 |
rs762846821
|
US | - | Sporadic cancers | |
154_GLY | SER | VAR_044833 |
rs137852789
|
US | - | Sporadic cancers | |
154_GLY | ILE | VAR_045796 |
-
|
US | - | Sporadic cancers | |
155_THR | ALA | VAR_005901 |
rs772683278
|
US | - | Sporadic cancers | |
155_THR | ILE | VAR_044834 |
-
|
US | - | Sporadic cancers | |
155_THR | MET | VAR_044835 |
-
|
US | - | A sporadic cancer | |
155_THR | ASN | VAR_044836 |
rs786202752
|
LP/P | - | Li-Fraumeni syndrome (LFS) [MIM:151623] | |
155_THR | PRO | VAR_044837 |
-
|
US | - | Sporadic cancers | |
155_THR | SER | VAR_044838 |
rs786202752
|
US | - | Sporadic cancers | |
156_ARG | PRO | VAR_005902 |
-
|
US | - | Sporadic cancers | |
156_ARG | CYS | VAR_044839 |
rs563378859
|
US | - | Sporadic cancers | |
156_ARG | GLY | VAR_044840 |
-
|
US | - | Sporadic cancers | |
156_ARG | HIS | VAR_044841 |
rs371524413
|
LP/P | - | Li-Fraumeni syndrome (LFS) [MIM:151623] | |
156_ARG | LEU | VAR_044842 |
-
|
US | - | Sporadic cancers | |
156_ARG | SER | VAR_044843 |
-
|
US | - | Sporadic cancers | |
157_VAL | ASP | VAR_005903 |
-
|
US | - | Sporadic cancers | |
157_VAL | PHE | VAR_005904 |
rs121912654
|
US | - | Sporadic cancers | |
157_VAL | ILE | VAR_012977 |
rs121912654
|
US | - | Sporadic cancers | |
157_VAL | ALA | VAR_044844 |
rs1131691023
|
US | - | Sporadic cancers | |
157_VAL | GLY | VAR_044845 |
-
|
US | - | Sporadic cancers | |
157_VAL | LEU | VAR_044846 |
-
|
US | - | Sporadic cancers | |
158_ARG | CYS | VAR_005905 |
rs587780068
|
US | - | Sporadic cancers | |
158_ARG | GLY | VAR_005906 |
-
|
LP/P | - | Li-Fraumeni syndrome (LFS) [MIM:151623] | |
158_ARG | HIS | VAR_005907 |
rs587782144
|
LP/P | - | Li-Fraumeni syndrome (LFS) [MIM:151623] | |
158_ARG | LEU | VAR_044847 |
-
|
US | - | Sporadic cancers | |
158_ARG | PRO | VAR_044848 |
rs587782144
|
US | - | Sporadic cancers | |
158_ARG | GLN | VAR_044849 |
-
|
US | - | A sporadic cancer | |
158_ARG | SER | VAR_044850 |
-
|
US | - | Sporadic cancers | |
158_ARG | PHE | VAR_045797 |
-
|
US | - | A sporadic cancer | |
158_ARG | TYR | VAR_045798 |
-
|
US | - | A sporadic cancer | |
158_ARG | HIS |
ClinVar chr17:7578457 |
rs587782144
|
Pathogenic/Likely pathogenic | - | Hereditary cancer-predisposing syndrome|Li-Fraumeni syndrome|not provided|Li-Fraumeni syndrome 1|Rhabdomyosarcoma|Adrenocortical carcinoma, hereditary|Breast and/or ovarian cancer [MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162|MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524|MedGen:C3661900|Gene:553989,MedGen:C1835398,OMIM:151623,Orphanet:524|Human Phenotype Ontology:HP:0002859,MONDO:MONDO:0005212,MeSH:D012208,MedGen:C0035412,Orphanet:780|MONDO:MONDO:0008734,MedGen:C1859972,OMIM:202300,Orphanet:1501|MedGen:CN221562] | |
158_ARG | PRO |
ClinVar chr17:7578457 |
rs587782144
|
Likely pathogenic | - | not provided|Li-Fraumeni syndrome|Squamous cell carcinoma of the head and neck|Hereditary cancer-predisposing syndrome|Li-Fraumeni syndrome 1 [MedGen:C3661900|MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524|MONDO:MONDO:0010150,MeSH:D000077195,MedGen:C1168401,OMIM:275355,Orphanet:67037|MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162|Gene:553989,MedGen:C1835398,OMIM:151623,Orphanet:524] | |
158_ARG | LEU |
ClinVar chr17:7578457 |
rs587782144
|
Pathogenic | - | Li-Fraumeni syndrome|not provided|Li-Fraumeni syndrome 1|Hereditary cancer-predisposing syndrome [MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524|MedGen:C3661900|Gene:553989,MedGen:C1835398,OMIM:151623,Orphanet:524|MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162] | |
158_ARG | GLY |
ClinVar chr17:7578458 |
rs587780068
|
Pathogenic | - | Li-Fraumeni syndrome [MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524] | |
158_ARG | SER |
ClinVar chr17:7578458 |
rs587780068
|
Pathogenic | - | Li-Fraumeni syndrome [MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524] | |
159_ALA | ASP | VAR_044851 |
-
|
US | - | Sporadic cancers | |
159_ALA | GLY | VAR_044852 |
-
|
US | - | Sporadic cancers | |
159_ALA | PRO | VAR_044853 |
rs730882000
|
US | - | Sporadic cancers | |
159_ALA | SER | VAR_044854 |
-
|
US | - | Sporadic cancers | |
159_ALA | THR | VAR_044855 |
rs730882000
|
US | - | Sporadic cancers | |
159_ALA | VAL | VAR_044856 |
rs1555526131
|
US | - | Sporadic cancers | |
159_ALA | PHE | VAR_045799 |
rs730882022
|
US | - | A sporadic cancer | |
159_ALA | VAL |
ClinVar chr17:7578454 |
rs1555526131
|
Pathogenic/Likely pathogenic | - | Li-Fraumeni syndrome|not provided|Hereditary cancer-predisposing syndrome|Adrenocortical carcinoma, hereditary [MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524|MedGen:C3661900|MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162|MONDO:MONDO:0008734,MedGen:C1859972,OMIM:202300,Orphanet:1501] | |
159_ALA | ASP |
ClinVar chr17:7578454 |
rs1555526131
|
Pathogenic | - | Li-Fraumeni syndrome|Prostate cancer, hereditary, 1 [MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524|MONDO:MONDO:0011098,MedGen:C4722327,OMIM:601518,Orphanet:1331] | |
160_MET | ILE | VAR_005908 |
rs772354334
|
US | - | Sporadic cancers | |
160_MET | LYS | VAR_044857 |
-
|
US | - | Sporadic cancers | |
160_MET | THR | VAR_044858 |
-
|
US | - | A sporadic cancer | |
160_MET | VAL | VAR_044859 |
rs377274728
|
US | - | Sporadic cancers | |
160_MET | THR |
8.3kJPN chr17:7578451 |
-
|
- | 0.0001 | - | |
161_ALA | SER | VAR_005909 |
-
|
US | - | Sporadic cancers | |
161_ALA | ASP | VAR_044860 |
rs1064795691
|
US | - | Sporadic cancers | |
161_ALA | GLY | VAR_044861 |
-
|
US | - | Sporadic cancers | |
161_ALA | PRO | VAR_044862 |
-
|
US | - | Sporadic cancers | |
161_ALA | THR | VAR_044863 |
rs193920817
|
US | - | Sporadic cancers | |
161_ALA | VAL | VAR_044864 |
-
|
US | - | Sporadic cancers | |
161_ALA | PHE | VAR_045800 |
-
|
US | - | A sporadic cancer | |
161_ALA | THR |
ClinVar chr17:7578449 |
rs193920817
|
Pathogenic/Likely pathogenic | - | Malignant tumor of prostate|not provided|Hereditary cancer-predisposing syndrome|Li-Fraumeni syndrome|Neoplasm of ovary|Li-Fraumeni syndrome 1|Adrenocortical carcinoma, hereditary [Human Phenotype Ontology:HP:0012125,MONDO:MONDO:0008315,MedGen:C0376358,OMIM:176807,Orphanet:1331|MedGen:C3661900|MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162|MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524|Human Phenotype Ontology:HP:0100615,MONDO:MONDO:0021068,MeSH:D010051,MedGen:C0919267,OMIM:167000|Gene:553989,MedGen:C1835398,OMIM:151623,Orphanet:524|MONDO:MONDO:0008734,MedGen:C1859972,OMIM:202300,Orphanet:1501] | |
162_ILE | SER | VAR_005910 |
rs587780069
|
US | - | Sporadic cancers | |
162_ILE | VAL | VAR_005911 |
-
|
US | - | Sporadic cancers | |
162_ILE | PHE | VAR_044865 |
-
|
US | - | Sporadic cancers | |
162_ILE | MET | VAR_044866 |
-
|
US | - | Sporadic cancers | |
162_ILE | ASN | VAR_044867 |
-
|
US | - | A breast cancer with no family history | |
162_ILE | THR | VAR_044868 |
-
|
US | - | Sporadic cancers | |
163_TYR | HIS | VAR_005912 |
rs786203436
|
US | - | Sporadic cancers | |
163_TYR | CYS | VAR_033035 |
rs148924904
|
LP/P | - | Li-Fraumeni syndrome (LFS) [MIM:151623] | |
163_TYR | ASP | VAR_044869 |
rs786203436
|
US | - | Sporadic cancers | |
163_TYR | PHE | VAR_044870 |
-
|
US | - | A sporadic cancer | |
163_TYR | ASN | VAR_044871 |
rs786203436
|
US | - | Sporadic cancers | |
163_TYR | SER | VAR_044872 |
-
|
US | - | Sporadic cancers | |
163_TYR | CYS |
ClinVar chr17:7578442 |
rs148924904
|
Pathogenic | - | not provided|Hepatocellular carcinoma|Brainstem glioma|Squamous cell lung carcinoma|Small cell lung carcinoma|Neoplasm of the large intestine|Pancreatic adenocarcinoma|Breast neoplasm|Carcinoma of esophagus|Malignant melanoma of skin|Ovarian serous cystadenocarcinoma|Squamous cell carcinoma of the head and neck|Hereditary cancer-predisposing syndrome|Neoplasm of ovary|Uterine carcinosarcoma|Lung adenocarcinoma|Neoplasm of brain|Li-Fraumeni syndrome [MedGen:C3661900|Human Phenotype Ontology:HP:0001402,Human Phenotype Ontology:HP:0002899,Human Phenotype Ontology:HP:0003007,Human Phenotype Ontology:HP:0006750,MONDO:MONDO:0007256,MedGen:C2239176,OMIM:114550,Orphanet:88673|Human Phenotype Ontology:HP:0010796,MONDO:MONDO:0002911,MedGen:C0677865|Human Phenotype Ontology:HP:0030359,MONDO:MONDO:0005097,MedGen:C0149782|Human Phenotype Ontology:HP:0030357,MONDO:MONDO:0008433,MeSH:D055752,MedGen:C0149925,OMIM:182280,Orphanet:70573|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|Human Phenotype Ontology:HP:0006725,MONDO:MONDO:0006047,MedGen:C0281361|Human Phenotype Ontology:HP:0010623,Human Phenotype Ontology:HP:0100013,MONDO:MONDO:0021100,MeSH:D001943,MedGen:C1458155|Human Phenotype Ontology:HP:0011459,MONDO:MONDO:0019086,MedGen:C0152018,Orphanet:70482|Human Phenotype Ontology:HP:0012056,MONDO:MONDO:0005012,MeSH:C562393,MedGen:C0151779|MONDO:MONDO:0006046,MedGen:C0279663|MONDO:MONDO:0010150,MeSH:D000077195,MedGen:C1168401,OMIM:275355,Orphanet:67037|MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162|Human Phenotype Ontology:HP:0100615,MONDO:MONDO:0021068,MeSH:D010051,MedGen:C0919267,OMIM:167000|MONDO:MONDO:0006485,MedGen:C0280630|Human Phenotype Ontology:HP:0030078,MONDO:MONDO:0005061,MeSH:D000077192,MedGen:C0152013|Human Phenotype Ontology:HP:0030692,MONDO:MONDO:0021211,MeSH:D001932,MedGen:C0006118|MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524] | |
163_TYR | TER |
ClinVar chr17:7578441 |
rs1567553246
|
Pathogenic | - | not provided|Li-Fraumeni syndrome [MedGen:C3661900|MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524] | |
163_TYR | TER |
ClinVar chr17:7578441 |
rs1567553246
|
Pathogenic | - | Li-Fraumeni syndrome [MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524] | |
164_LYS | ASN | VAR_005913 |
rs1131691034
|
US | - | Sporadic cancers | |
164_LYS | GLN | VAR_005914 |
-
|
US | - | Sporadic cancers | |
164_LYS | GLU | VAR_044873 |
rs879254249
|
US | - | Sporadic cancers | |
164_LYS | MET | VAR_044874 |
-
|
US | - | Sporadic cancers | |
164_LYS | ARG | VAR_044875 |
-
|
US | - | Sporadic cancers | |
164_LYS | THR | VAR_044876 |
-
|
US | - | Sporadic cancers | |
164_LYS | TER |
ClinVar chr17:7578440 |
rs879254249
|
Pathogenic | - | Li-Fraumeni syndrome [MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524] | |
165_GLN | LEU | VAR_005915 |
-
|
US | - | Sporadic cancers | |
165_GLN | ARG | VAR_005916 |
-
|
US | - | Sporadic cancers | |
165_GLN | GLU | VAR_044877 |
-
|
US | - | Sporadic cancers | |
165_GLN | HIS | VAR_044878 |
-
|
US | - | A sporadic cancer | |
165_GLN | PRO | VAR_044879 |
-
|
US | - | Sporadic cancers | |
165_GLN | TER |
ClinVar chr17:7578437 |
rs730882001
|
Pathogenic | - | not provided|Hereditary cancer-predisposing syndrome|Li-Fraumeni syndrome|Neoplasm of ovary|Squamous cell carcinoma of the head and neck|Lip and oral cavity carcinoma|Familial cancer of breast|Li-Fraumeni syndrome 1 [MedGen:C3661900|MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162|MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524|Human Phenotype Ontology:HP:0100615,MONDO:MONDO:0021068,MeSH:D010051,MedGen:C0919267,OMIM:167000|MONDO:MONDO:0010150,MeSH:D000077195,MedGen:C1168401,OMIM:275355,Orphanet:67037|MONDO:MONDO:0023644,MedGen:C0220641|MONDO:MONDO:0016419,MedGen:C0346153,OMIM:114480,Orphanet:227535|Gene:553989,MedGen:C1835398,OMIM:151623,Orphanet:524] | |
165_GLN | LEU |
ClinVar chr17:7578436 |
-
|
Pathogenic | - | Acute myeloid leukemia [Human Phenotype Ontology:HP:0001914,Human Phenotype Ontology:HP:0004808,Human Phenotype Ontology:HP:0004843,Human Phenotype Ontology:HP:0005516,Human Phenotype Ontology:HP:0006724,Human Phenotype Ontology:HP:0006728,MONDO:MONDO:0018874,MeSH:D015470,MedGen:C0023467,OMIM:601626,Orphanet:519] | |
166_SER | LEU | VAR_005917 |
rs1555526101
|
US | - | Sporadic cancers | |
166_SER | ALA | VAR_044880 |
-
|
US | - | Sporadic cancers | |
166_SER | GLY | VAR_044881 |
-
|
US | - | A sporadic cancer | |
166_SER | PRO | VAR_044882 |
-
|
US | - | Sporadic cancers | |
166_SER | THR | VAR_044883 |
-
|
US | - | Sporadic cancers | |
166_SER | TER |
ClinVar chr17:7578433 |
rs1555526101
|
Pathogenic | - | Neoplasm of ovary [Human Phenotype Ontology:HP:0100615,MONDO:MONDO:0021068,MeSH:D010051,MedGen:C0919267,OMIM:167000] | |
167_GLN | HIS | VAR_044884 |
-
|
US | - | Sporadic cancers | |
167_GLN | LYS | VAR_044885 |
-
|
LP/P | - | Li-Fraumeni syndrome (LFS) [MIM:151623] | |
167_GLN | LEU | VAR_044886 |
-
|
US | - | Sporadic cancers | |
167_GLN | ARG | VAR_044887 |
-
|
US | - | Sporadic cancers | |
167_GLN | TER |
ClinVar chr17:7578431 |
rs1555526097
|
Pathogenic/Likely pathogenic | - | Li-Fraumeni syndrome|Li-Fraumeni syndrome 1|not provided|Hereditary cancer-predisposing syndrome|Adrenocortical carcinoma, hereditary [MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524|Gene:553989,MedGen:C1835398,OMIM:151623,Orphanet:524|MedGen:C3661900|MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162|MONDO:MONDO:0008734,MedGen:C1859972,OMIM:202300,Orphanet:1501] | |
168_HIS | ARG | VAR_005918 |
rs867114783
|
US | - | Sporadic cancers | |
168_HIS | ASP | VAR_044888 |
-
|
US | - | Sporadic cancers | |
168_HIS | LEU | VAR_044889 |
-
|
US | - | Sporadic cancers | |
168_HIS | ASN | VAR_044890 |
-
|
US | - | Sporadic cancers | |
168_HIS | PRO | VAR_044891 |
-
|
US | - | Sporadic cancers | |
168_HIS | GLN | VAR_044892 |
-
|
US | - | Sporadic cancers | |
168_HIS | TYR | VAR_044893 |
-
|
US | - | Sporadic cancers | |
168_HIS | VAL | VAR_045801 |
-
|
US | - | A sporadic cancer | |
168_HIS | LEU |
ClinVar chr17:7578427 |
-
|
Pathogenic | - | Hereditary cancer-predisposing syndrome [MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162] | |
169_MET | ILE | VAR_005919 |
-
|
US | - | Sporadic cancers | |
169_MET | THR | VAR_005920 |
-
|
US | - | Sporadic cancers | |
169_MET | LYS | VAR_044894 |
-
|
US | - | Sporadic cancers | |
169_MET | VAL | VAR_044895 |
-
|
US | - | Sporadic cancers | |
170_THR | MET | VAR_005921 |
rs779000871
|
US | - | Sporadic cancers | |
170_THR | SER | VAR_005922 |
-
|
US | - | Sporadic cancers | |
170_THR | ALA | VAR_044896 |
rs587780729
|
US | - | Sporadic cancers | |
170_THR | LYS | VAR_044897 |
-
|
US | - | A sporadic cancer | |
170_THR | PRO | VAR_044898 |
-
|
US | - | A sporadic cancer | |
171_GLU | ALA | VAR_044899 |
-
|
US | - | A sporadic cancer | |
171_GLU | ASP | VAR_044900 |
-
|
US | - | Sporadic cancers | |
171_GLU | GLY | VAR_044901 |
-
|
US | - | Sporadic cancers | |
171_GLU | LYS | VAR_044902 |
rs587781845
|
US | - | Sporadic cancers | |
171_GLU | GLN | VAR_044903 |
-
|
US | - | A sporadic cancer | |
171_GLU | VAL | VAR_044904 |
-
|
US | - | Sporadic cancers | |
171_GLU | TER |
ClinVar chr17:7578419 |
rs587781845
|
Pathogenic | - | Neoplasm of ovary|Li-Fraumeni syndrome [Human Phenotype Ontology:HP:0100615,MONDO:MONDO:0021068,MeSH:D010051,MedGen:C0919267,OMIM:167000|MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524] | |
171_GLU | GLY |
ClinVar chr17:7578418 |
-
|
Pathogenic | - | Hereditary cancer-predisposing syndrome [MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162] | |
171_GLU | ASP |
ClinVar chr17:7578417 |
-
|
Pathogenic | - | Acute myeloid leukemia [Human Phenotype Ontology:HP:0001914,Human Phenotype Ontology:HP:0004808,Human Phenotype Ontology:HP:0004843,Human Phenotype Ontology:HP:0005516,Human Phenotype Ontology:HP:0006724,Human Phenotype Ontology:HP:0006728,MONDO:MONDO:0018874,MeSH:D015470,MedGen:C0023467,OMIM:601626,Orphanet:519] | |
172_VAL | ALA | VAR_005923 |
-
|
US | - | Sporadic cancers | |
172_VAL | ASP | VAR_044905 |
-
|
US | - | Sporadic cancers | |
172_VAL | PHE | VAR_044906 |
rs1131691043
|
LP/P | - | Li-Fraumeni syndrome (LFS) [MIM:151623] | |
172_VAL | GLY | VAR_044907 |
rs1131691021
|
US | - | Sporadic cancers | |
172_VAL | ILE | VAR_044908 |
-
|
US | - | Sporadic cancers | |
172_VAL | ILE |
8.3kJPN chr17:7578416 |
-
|
- | 0.0001 | - | |
173_VAL | GLU | VAR_005924 |
rs1057519747
|
US | - | Sporadic cancers | |
173_VAL | LEU | VAR_005925 |
rs876660754
|
US | - | Sporadic cancers | |
173_VAL | MET | VAR_005926 |
rs876660754
|
LP/P | - | Li-Fraumeni syndrome (LFS) [MIM:151623] | |
173_VAL | ALA | VAR_044909 |
rs1057519747
|
US | - | Sporadic cancers | |
173_VAL | GLY | VAR_044910 |
rs1057519747
|
US | - | Sporadic cancers | |
173_VAL | TRP | VAR_045802 |
-
|
US | - | A sporadic cancer | |
173_VAL | MET |
ClinVar chr17:7578413 |
rs876660754
|
Pathogenic | - | Hereditary cancer-predisposing syndrome|not provided|Malignant neoplasm of body of uterus|Squamous cell carcinoma of the head and neck|Hepatocellular carcinoma|Neoplasm of brain|Lung adenocarcinoma|Gastric adenocarcinoma|Li-Fraumeni syndrome|Ovarian serous cystadenocarcinoma|Neoplasm of the large intestine|Adrenal cortex carcinoma|Malignant melanoma of skin|Breast neoplasm|Pancreatic adenocarcinoma|Carcinoma of esophagus|Brainstem glioma|Small cell lung carcinoma|Neoplasm of ovary|Lip and oral cavity carcinoma [MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162|MedGen:C3661900|MedGen:C0153574|MONDO:MONDO:0010150,MeSH:D000077195,MedGen:C1168401,OMIM:275355,Orphanet:67037|Human Phenotype Ontology:HP:0001402,Human Phenotype Ontology:HP:0002899,Human Phenotype Ontology:HP:0003007,Human Phenotype Ontology:HP:0006750,MONDO:MONDO:0007256,MedGen:C2239176,OMIM:114550,Orphanet:88673|Human Phenotype Ontology:HP:0030692,MONDO:MONDO:0021211,MeSH:D001932,MedGen:C0006118|Human Phenotype Ontology:HP:0030078,MONDO:MONDO:0005061,MeSH:D000077192,MedGen:C0152013|Human Phenotype Ontology:HP:0033770,MONDO:MONDO:0005036,MedGen:C0278701|MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524|MONDO:MONDO:0006046,MedGen:C0279663|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|Human Phenotype Ontology:HP:0002889,Human Phenotype Ontology:HP:0006744,Human Phenotype Ontology:HP:0006759,MONDO:MONDO:0006639,MeSH:D018268,MedGen:C0206686,Orphanet:1501|Human Phenotype Ontology:HP:0012056,MONDO:MONDO:0005012,MeSH:C562393,MedGen:C0151779|Human Phenotype Ontology:HP:0010623,Human Phenotype Ontology:HP:0100013,MONDO:MONDO:0021100,MeSH:D001943,MedGen:C1458155|Human Phenotype Ontology:HP:0006725,MONDO:MONDO:0006047,MedGen:C0281361|Human Phenotype Ontology:HP:0011459,MONDO:MONDO:0019086,MedGen:C0152018,Orphanet:70482|Human Phenotype Ontology:HP:0010796,MONDO:MONDO:0002911,MedGen:C0677865|Human Phenotype Ontology:HP:0030357,MONDO:MONDO:0008433,MeSH:D055752,MedGen:C0149925,OMIM:182280,Orphanet:70573|Human Phenotype Ontology:HP:0100615,MONDO:MONDO:0021068,MeSH:D010051,MedGen:C0919267,OMIM:167000|MONDO:MONDO:0023644,MedGen:C0220641] | |
173_VAL | ALA |
ClinVar chr17:7578412 |
rs1057519747
|
Pathogenic/Likely pathogenic | - | Adrenal cortex carcinoma|Ovarian serous cystadenocarcinoma|Neoplasm of brain|Carcinoma of esophagus|Acute myeloid leukemia|Malignant neoplasm of body of uterus|Neoplasm of the large intestine|Pancreatic adenocarcinoma|Brainstem glioma|Malignant melanoma of skin|Small cell lung carcinoma|Gastric adenocarcinoma|Hepatocellular carcinoma|Squamous cell carcinoma of the head and neck|Breast neoplasm|Lung adenocarcinoma|Hereditary cancer-predisposing syndrome|Li-Fraumeni syndrome|Li-Fraumeni syndrome 1 [Human Phenotype Ontology:HP:0002889,Human Phenotype Ontology:HP:0006744,Human Phenotype Ontology:HP:0006759,MONDO:MONDO:0006639,MeSH:D018268,MedGen:C0206686,Orphanet:1501|MONDO:MONDO:0006046,MedGen:C0279663|Human Phenotype Ontology:HP:0030692,MONDO:MONDO:0021211,MeSH:D001932,MedGen:C0006118|Human Phenotype Ontology:HP:0011459,MONDO:MONDO:0019086,MedGen:C0152018,Orphanet:70482|Human Phenotype Ontology:HP:0001914,Human Phenotype Ontology:HP:0004808,Human Phenotype Ontology:HP:0004843,Human Phenotype Ontology:HP:0005516,Human Phenotype Ontology:HP:0006724,Human Phenotype Ontology:HP:0006728,MONDO:MONDO:0018874,MeSH:D015470,MedGen:C0023467,OMIM:601626,Orphanet:519|MedGen:C0153574|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|Human Phenotype Ontology:HP:0006725,MONDO:MONDO:0006047,MedGen:C0281361|Human Phenotype Ontology:HP:0010796,MONDO:MONDO:0002911,MedGen:C0677865|Human Phenotype Ontology:HP:0012056,MONDO:MONDO:0005012,MeSH:C562393,MedGen:C0151779|Human Phenotype Ontology:HP:0030357,MONDO:MONDO:0008433,MeSH:D055752,MedGen:C0149925,OMIM:182280,Orphanet:70573|Human Phenotype Ontology:HP:0033770,MONDO:MONDO:0005036,MedGen:C0278701|Human Phenotype Ontology:HP:0001402,Human Phenotype Ontology:HP:0002899,Human Phenotype Ontology:HP:0003007,Human Phenotype Ontology:HP:0006750,MONDO:MONDO:0007256,MedGen:C2239176,OMIM:114550,Orphanet:88673|MONDO:MONDO:0010150,MeSH:D000077195,MedGen:C1168401,OMIM:275355,Orphanet:67037|Human Phenotype Ontology:HP:0010623,Human Phenotype Ontology:HP:0100013,MONDO:MONDO:0021100,MeSH:D001943,MedGen:C1458155|Human Phenotype Ontology:HP:0030078,MONDO:MONDO:0005061,MeSH:D000077192,MedGen:C0152013|MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162|MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524|Gene:553989,MedGen:C1835398,OMIM:151623,Orphanet:524] | |
173_VAL | LEU |
ClinVar chr17:7578413 |
rs876660754
|
Pathogenic/Likely pathogenic | - | Lung adenocarcinoma|Malignant melanoma of skin|Breast neoplasm|Brainstem glioma|Malignant neoplasm of body of uterus|Carcinoma of esophagus|Ovarian serous cystadenocarcinoma|Neoplasm of brain|Squamous cell carcinoma of the head and neck|Pancreatic adenocarcinoma|Neoplasm of the large intestine|Hepatocellular carcinoma|Small cell lung carcinoma|Gastric adenocarcinoma|Adrenal cortex carcinoma|Neoplasm of ovary|Li-Fraumeni syndrome|not provided|Li-Fraumeni syndrome 1|Hereditary cancer-predisposing syndrome [Human Phenotype Ontology:HP:0030078,MONDO:MONDO:0005061,MeSH:D000077192,MedGen:C0152013|Human Phenotype Ontology:HP:0012056,MONDO:MONDO:0005012,MeSH:C562393,MedGen:C0151779|Human Phenotype Ontology:HP:0010623,Human Phenotype Ontology:HP:0100013,MONDO:MONDO:0021100,MeSH:D001943,MedGen:C1458155|Human Phenotype Ontology:HP:0010796,MONDO:MONDO:0002911,MedGen:C0677865|MedGen:C0153574|Human Phenotype Ontology:HP:0011459,MONDO:MONDO:0019086,MedGen:C0152018,Orphanet:70482|MONDO:MONDO:0006046,MedGen:C0279663|Human Phenotype Ontology:HP:0030692,MONDO:MONDO:0021211,MeSH:D001932,MedGen:C0006118|MONDO:MONDO:0010150,MeSH:D000077195,MedGen:C1168401,OMIM:275355,Orphanet:67037|Human Phenotype Ontology:HP:0006725,MONDO:MONDO:0006047,MedGen:C0281361|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|Human Phenotype Ontology:HP:0001402,Human Phenotype Ontology:HP:0002899,Human Phenotype Ontology:HP:0003007,Human Phenotype Ontology:HP:0006750,MONDO:MONDO:0007256,MedGen:C2239176,OMIM:114550,Orphanet:88673|Human Phenotype Ontology:HP:0030357,MONDO:MONDO:0008433,MeSH:D055752,MedGen:C0149925,OMIM:182280,Orphanet:70573|Human Phenotype Ontology:HP:0033770,MONDO:MONDO:0005036,MedGen:C0278701|Human Phenotype Ontology:HP:0002889,Human Phenotype Ontology:HP:0006744,Human Phenotype Ontology:HP:0006759,MONDO:MONDO:0006639,MeSH:D018268,MedGen:C0206686,Orphanet:1501|Human Phenotype Ontology:HP:0100615,MONDO:MONDO:0021068,MeSH:D010051,MedGen:C0919267,OMIM:167000|MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524|MedGen:C3661900|Gene:553989,MedGen:C1835398,OMIM:151623,Orphanet:524|MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162] | |
174_ARG | LYS | VAR_005927 |
rs1064796681
|
US | - | Sporadic cancers | |
174_ARG | GLY | VAR_044911 |
rs864622115
|
LP/P | - | Li-Fraumeni syndrome (LFS) [MIM:151623] | |
174_ARG | MET | VAR_044912 |
-
|
US | - | Sporadic cancers | |
174_ARG | SER | VAR_044913 |
-
|
US | - | Sporadic cancers | |
174_ARG | THR | VAR_044914 |
-
|
US | - | A sporadic cancer | |
174_ARG | TRP | VAR_044915 |
-
|
US | - | Sporadic cancers | |
175_ARG | CYS | VAR_005928 |
rs138729528
|
US | - | Sporadic cancers | |
175_ARG | GLY | VAR_005929 |
rs138729528
|
LP/P | - | Li-Fraumeni syndrome (LFS) [MIM:151623] | |
175_ARG | LEU | VAR_005930 |
rs28934578
|
LP/P | - | Li-Fraumeni syndrome (LFS) [MIM:151623] | |
175_ARG | PRO | VAR_005931 |
-
|
US | - | Sporadic cancers | |
175_ARG | HIS | VAR_005932 |
rs28934578
|
LP/P | - | Li-Fraumeni syndrome (LFS) [MIM:151623] | |
175_ARG | GLN | VAR_044916 |
-
|
US | - | A sporadic cancer | |
175_ARG | SER | VAR_044917 |
-
|
US | - | Sporadic cancers | |
175_ARG | HIS |
ClinVar chr17:7578406 |
rs28934578
|
Pathogenic | - | Li-Fraumeni syndrome 1|Hereditary cancer-predisposing syndrome|not provided|Malignant tumor of esophagus|Li-Fraumeni syndrome|Neoplasm|Breast neoplasm|Neoplasm of ovary|Lip and oral cavity carcinoma|Squamous cell carcinoma of the head and neck|Familial cancer of breast|Colorectal cancer|12 conditions|Gastric cancer|Adrenocortical carcinoma, hereditary [Gene:553989,MedGen:C1835398,OMIM:151623,Orphanet:524|MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162|MedGen:C3661900|MONDO:MONDO:0007576,MedGen:C0546837,OMIM:133239,Orphanet:99977|MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524|Human Phenotype Ontology:HP:0002664,Human Phenotype Ontology:HP:0003008,Human Phenotype Ontology:HP:0006741,MONDO:MONDO:0005070,MeSH:D009369,MedGen:C0027651|Human Phenotype Ontology:HP:0010623,Human Phenotype Ontology:HP:0100013,MONDO:MONDO:0021100,MeSH:D001943,MedGen:C1458155|Human Phenotype Ontology:HP:0100615,MONDO:MONDO:0021068,MeSH:D010051,MedGen:C0919267,OMIM:167000|MONDO:MONDO:0023644,MedGen:C0220641|MONDO:MONDO:0010150,MeSH:D000077195,MedGen:C1168401,OMIM:275355,Orphanet:67037|MONDO:MONDO:0016419,MedGen:C0346153,OMIM:114480,Orphanet:227535|MONDO:MONDO:0005575,MedGen:C0346629,OMIM:114500|12 conditions|Human Phenotype Ontology:HP:0012126,MONDO:MONDO:0001056,MeSH:D013274,MedGen:C0024623,OMIM:613659|MONDO:MONDO:0008734,MedGen:C1859972,OMIM:202300,Orphanet:1501] | |
175_ARG | LEU |
ClinVar chr17:7578406 |
rs28934578
|
Pathogenic/Likely pathogenic | - | Hereditary cancer-predisposing syndrome|Li-Fraumeni syndrome|Li-Fraumeni syndrome 1 [MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162|MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524|Gene:553989,MedGen:C1835398,OMIM:151623,Orphanet:524] | |
175_ARG | GLY |
ClinVar chr17:7578407 |
rs138729528
|
Pathogenic | - | Neoplasm of the large intestine|Brainstem glioma|Hepatocellular carcinoma|Malignant neoplasm of body of uterus|Ovarian serous cystadenocarcinoma|Transitional cell carcinoma of the bladder|Breast neoplasm|Nasopharyngeal neoplasm|Glioblastoma|Squamous cell carcinoma of the head and neck|Carcinoma of esophagus|Prostate adenocarcinoma|Neoplasm of brain|Pancreatic adenocarcinoma|Medulloblastoma|Malignant melanoma of skin|Lung adenocarcinoma|Squamous cell lung carcinoma|Gastric adenocarcinoma|B-cell chronic lymphocytic leukemia|Li-Fraumeni syndrome|Hereditary cancer-predisposing syndrome|Uterine carcinosarcoma|Gallbladder carcinoma|Neoplasm of ovary|not provided|Li-Fraumeni syndrome 1 [Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|Human Phenotype Ontology:HP:0010796,MONDO:MONDO:0002911,MedGen:C0677865|Human Phenotype Ontology:HP:0001402,Human Phenotype Ontology:HP:0002899,Human Phenotype Ontology:HP:0003007,Human Phenotype Ontology:HP:0006750,MONDO:MONDO:0007256,MedGen:C2239176,OMIM:114550,Orphanet:88673|MedGen:C0153574|MONDO:MONDO:0006046,MedGen:C0279663|Human Phenotype Ontology:HP:0006740,MONDO:MONDO:0005611,MedGen:C0279680|Human Phenotype Ontology:HP:0010623,Human Phenotype Ontology:HP:0100013,MONDO:MONDO:0021100,MeSH:D001943,MedGen:C1458155|Human Phenotype Ontology:HP:0100630,MONDO:MONDO:0005375,MeSH:D009303,MedGen:C0027439|MONDO:MONDO:0018177,MeSH:D005909,MedGen:C0017636,Orphanet:360|MONDO:MONDO:0010150,MeSH:D000077195,MedGen:C1168401,OMIM:275355,Orphanet:67037|Human Phenotype Ontology:HP:0011459,MONDO:MONDO:0019086,MedGen:C0152018,Orphanet:70482|MONDO:MONDO:0005082,MedGen:C0007112|Human Phenotype Ontology:HP:0030692,MONDO:MONDO:0021211,MeSH:D001932,MedGen:C0006118|Human Phenotype Ontology:HP:0006725,MONDO:MONDO:0006047,MedGen:C0281361|Human Phenotype Ontology:HP:0002885,MONDO:MONDO:0007959,MeSH:D008527,MedGen:C0025149,OMIM:155255,Orphanet:616|Human Phenotype Ontology:HP:0012056,MONDO:MONDO:0005012,MeSH:C562393,MedGen:C0151779|Human Phenotype Ontology:HP:0030078,MONDO:MONDO:0005061,MeSH:D000077192,MedGen:C0152013|Human Phenotype Ontology:HP:0030359,MONDO:MONDO:0005097,MedGen:C0149782|Human Phenotype Ontology:HP:0033770,MONDO:MONDO:0005036,MedGen:C0278701|Human Phenotype Ontology:HP:0005550,Human Phenotype Ontology:HP:0006734,Human Phenotype Ontology:HP:0006760,MONDO:MONDO:0004948,MeSH:D015451,MedGen:C0023434,OMIM:151400,Orphanet:67038|MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524|MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162|MONDO:MONDO:0006485,MedGen:C0280630|MONDO:MONDO:0003220,MedGen:C0235782|Human Phenotype Ontology:HP:0100615,MONDO:MONDO:0021068,MeSH:D010051,MedGen:C0919267,OMIM:167000|MedGen:C3661900|Gene:553989,MedGen:C1835398,OMIM:151623,Orphanet:524] | |
175_ARG | CYS |
8.3kJPN chr17:7578407 |
rs138729528
|
- | 0.0001 | - | |
176_CYS | PHE | VAR_005933 |
rs786202962
|
US | - | Sporadic cancers | |
176_CYS | TRP | VAR_005934 |
rs1057519980
|
US | - | Sporadic cancers | |
176_CYS | GLY | VAR_044918 |
-
|
US | - | Sporadic cancers | |
176_CYS | ARG | VAR_044919 |
-
|
US | - | Sporadic cancers | |
176_CYS | SER | VAR_044920 |
rs967461896
|
US | - | Sporadic cancers | |
176_CYS | TYR | VAR_044921 |
rs786202962
|
US | - | Sporadic cancers | |
176_CYS | TYR |
ClinVar chr17:7578403 |
rs786202962
|
Pathogenic | - | Hereditary cancer-predisposing syndrome|not provided|Squamous cell carcinoma of the head and neck|Transitional cell carcinoma of the bladder|Hepatocellular carcinoma|Squamous cell lung carcinoma|Neoplasm of brain|Breast neoplasm|Acute myeloid leukemia|Papillary renal cell carcinoma type 1|Carcinoma of esophagus|Neoplasm of the large intestine|Lung adenocarcinoma|Ovarian serous cystadenocarcinoma|Gastric adenocarcinoma|Prostate adenocarcinoma|Pancreatic adenocarcinoma|Li-Fraumeni syndrome|Familial ovarian cancer|Squamous cell carcinoma|Li-Fraumeni syndrome 1|TP53-related condition|Adrenocortical carcinoma, hereditary [MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162|MedGen:C3661900|MONDO:MONDO:0010150,MeSH:D000077195,MedGen:C1168401,OMIM:275355,Orphanet:67037|Human Phenotype Ontology:HP:0006740,MONDO:MONDO:0005611,MedGen:C0279680|Human Phenotype Ontology:HP:0001402,Human Phenotype Ontology:HP:0002899,Human Phenotype Ontology:HP:0003007,Human Phenotype Ontology:HP:0006750,MONDO:MONDO:0007256,MedGen:C2239176,OMIM:114550,Orphanet:88673|Human Phenotype Ontology:HP:0030359,MONDO:MONDO:0005097,MedGen:C0149782|Human Phenotype Ontology:HP:0030692,MONDO:MONDO:0021211,MeSH:D001932,MedGen:C0006118|Human Phenotype Ontology:HP:0010623,Human Phenotype Ontology:HP:0100013,MONDO:MONDO:0021100,MeSH:D001943,MedGen:C1458155|Human Phenotype Ontology:HP:0001914,Human Phenotype Ontology:HP:0004808,Human Phenotype Ontology:HP:0004843,Human Phenotype Ontology:HP:0005516,Human Phenotype Ontology:HP:0006724,Human Phenotype Ontology:HP:0006728,MONDO:MONDO:0018874,MeSH:D015470,MedGen:C0023467,OMIM:601626,Orphanet:519|Human Phenotype Ontology:HP:0011797,MedGen:C1336839,OMIM:605074,Orphanet:47044|Human Phenotype Ontology:HP:0011459,MONDO:MONDO:0019086,MedGen:C0152018,Orphanet:70482|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|Human Phenotype Ontology:HP:0030078,MONDO:MONDO:0005061,MeSH:D000077192,MedGen:C0152013|MONDO:MONDO:0006046,MedGen:C0279663|Human Phenotype Ontology:HP:0033770,MONDO:MONDO:0005036,MedGen:C0278701|MONDO:MONDO:0005082,MedGen:C0007112|Human Phenotype Ontology:HP:0006725,MONDO:MONDO:0006047,MedGen:C0281361|MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524|MONDO:MONDO:0016248,MedGen:C5679802,Orphanet:213517|Human Phenotype Ontology:HP:0002860,MONDO:MONDO:0005096,MeSH:D002294,MedGen:C0007137|Gene:553989,MedGen:C1835398,OMIM:151623,Orphanet:524||MONDO:MONDO:0008734,MedGen:C1859972,OMIM:202300,Orphanet:1501] | |
176_CYS | PHE |
ClinVar chr17:7578403 |
rs786202962
|
Pathogenic/Likely pathogenic | - | Prostate adenocarcinoma|Lung adenocarcinoma|Neoplasm of the large intestine|Gastric adenocarcinoma|Transitional cell carcinoma of the bladder|Papillary renal cell carcinoma type 1|Pancreatic adenocarcinoma|Breast neoplasm|Squamous cell lung carcinoma|Hepatocellular carcinoma|Neoplasm of brain|Ovarian serous cystadenocarcinoma|Squamous cell carcinoma of the head and neck|Acute myeloid leukemia|Carcinoma of esophagus|Li-Fraumeni syndrome|Hereditary cancer-predisposing syndrome [MONDO:MONDO:0005082,MedGen:C0007112|Human Phenotype Ontology:HP:0030078,MONDO:MONDO:0005061,MeSH:D000077192,MedGen:C0152013|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|Human Phenotype Ontology:HP:0033770,MONDO:MONDO:0005036,MedGen:C0278701|Human Phenotype Ontology:HP:0006740,MONDO:MONDO:0005611,MedGen:C0279680|Human Phenotype Ontology:HP:0011797,MedGen:C1336839,OMIM:605074,Orphanet:47044|Human Phenotype Ontology:HP:0006725,MONDO:MONDO:0006047,MedGen:C0281361|Human Phenotype Ontology:HP:0010623,Human Phenotype Ontology:HP:0100013,MONDO:MONDO:0021100,MeSH:D001943,MedGen:C1458155|Human Phenotype Ontology:HP:0030359,MONDO:MONDO:0005097,MedGen:C0149782|Human Phenotype Ontology:HP:0001402,Human Phenotype Ontology:HP:0002899,Human Phenotype Ontology:HP:0003007,Human Phenotype Ontology:HP:0006750,MONDO:MONDO:0007256,MedGen:C2239176,OMIM:114550,Orphanet:88673|Human Phenotype Ontology:HP:0030692,MONDO:MONDO:0021211,MeSH:D001932,MedGen:C0006118|MONDO:MONDO:0006046,MedGen:C0279663|MONDO:MONDO:0010150,MeSH:D000077195,MedGen:C1168401,OMIM:275355,Orphanet:67037|Human Phenotype Ontology:HP:0001914,Human Phenotype Ontology:HP:0004808,Human Phenotype Ontology:HP:0004843,Human Phenotype Ontology:HP:0005516,Human Phenotype Ontology:HP:0006724,Human Phenotype Ontology:HP:0006728,MONDO:MONDO:0018874,MeSH:D015470,MedGen:C0023467,OMIM:601626,Orphanet:519|Human Phenotype Ontology:HP:0011459,MONDO:MONDO:0019086,MedGen:C0152018,Orphanet:70482|MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524|MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162] | |
176_CYS | TER |
ClinVar chr17:7578402 |
-
|
Pathogenic | - | Hereditary cancer-predisposing syndrome|Li-Fraumeni syndrome 1 [MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162|Gene:553989,MedGen:C1835398,OMIM:151623,Orphanet:524] | |
177_PRO | LEU | VAR_005935 |
rs751477326
|
US | - | Sporadic cancers | |
177_PRO | ARG | VAR_036505 |
rs751477326
|
US | - | Sporadic cancers | |
177_PRO | ALA | VAR_044922 |
-
|
US | - | A sporadic cancer | |
177_PRO | HIS | VAR_044923 |
-
|
US | - | Sporadic cancers | |
177_PRO | SER | VAR_044924 |
rs147002414
|
US | - | Sporadic cancers | |
177_PRO | THR | VAR_044925 |
-
|
US | - | A sporadic cancer | |
177_PRO | PHE | VAR_045803 |
-
|
US | - | Sporadic cancers | |
177_PRO | ILE | VAR_045804 |
-
|
US | - | A sporadic cancer | |
177_PRO | ARG |
ClinVar chr17:7578400 |
rs751477326
|
Pathogenic/Likely pathogenic | - | Li-Fraumeni syndrome|not provided|Hereditary cancer-predisposing syndrome|Li-Fraumeni syndrome 1 [MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524|MedGen:C3661900|MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162|Gene:553989,MedGen:C1835398,OMIM:151623,Orphanet:524] | |
178_HIS | ASP | VAR_044926 |
-
|
US | - | Sporadic cancers | |
178_HIS | LEU | VAR_044927 |
-
|
US | - | A sporadic cancer | |
178_HIS | ASN | VAR_044928 |
rs1064795203
|
US | - | Sporadic cancers | |
178_HIS | PRO | VAR_044929 |
rs1555526004
|
US | - | Sporadic cancers | |
178_HIS | GLN | VAR_044930 |
-
|
US | - | Sporadic cancers | |
178_HIS | ARG | VAR_044931 |
-
|
US | - | Sporadic cancers | |
178_HIS | TYR | VAR_044932 |
-
|
US | - | Sporadic cancers | |
178_HIS | ASP |
ClinVar chr17:7578398 |
rs1064795203
|
Likely pathogenic | - | Hereditary cancer-predisposing syndrome|Li-Fraumeni syndrome|Li-Fraumeni syndrome 1 [MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162|MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524|Gene:553989,MedGen:C1835398,OMIM:151623,Orphanet:524] | |
178_HIS | GLN |
ClinVar chr17:7578396 |
rs1555526001
|
Pathogenic/Likely pathogenic | - | Hereditary cancer-predisposing syndrome|Li-Fraumeni syndrome|Hereditary breast ovarian cancer syndrome [MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162|MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524|MONDO:MONDO:0003582,MeSH:D061325,MedGen:C0677776,Orphanet:145] | |
178_HIS | GLN |
ClinVar chr17:7578396 |
rs1555526001
|
Pathogenic/Likely pathogenic | - | Li-Fraumeni syndrome|Hereditary cancer-predisposing syndrome [MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524|MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162] | |
179_HIS | ASP | VAR_044933 |
rs587780070
|
US | - | Sporadic cancers | |
179_HIS | LEU | VAR_044934 |
rs1057519991
|
US | - | Sporadic cancers | |
179_HIS | ASN | VAR_044935 |
rs587780070
|
US | - | Sporadic cancers | |
179_HIS | PRO | VAR_044936 |
rs1057519991
|
US | - | Sporadic cancers | |
179_HIS | GLN | VAR_044937 |
rs876660821
|
US | - | Sporadic cancers | |
179_HIS | ARG | VAR_044938 |
rs1057519991
|
US | - | Sporadic cancers | |
179_HIS | TYR | VAR_044939 |
rs587780070
|
LP/P | - | Li-Fraumeni syndrome (LFS) [MIM:151623] | |
179_HIS | TYR |
ClinVar chr17:7578395 |
rs587780070
|
Pathogenic/Likely pathogenic | - | not provided|Glioblastoma|Squamous cell lung carcinoma|Ovarian serous cystadenocarcinoma|Neoplasm of the large intestine|Gastric adenocarcinoma|Uterine carcinosarcoma|Acute myeloid leukemia|Breast neoplasm|Squamous cell carcinoma of the skin|Pancreatic adenocarcinoma|Malignant melanoma of skin|Malignant neoplasm of body of uterus|Gallbladder carcinoma|Carcinoma of esophagus|Hepatocellular carcinoma|Small cell lung carcinoma|Squamous cell carcinoma of the head and neck|Neoplasm of brain|Lung adenocarcinoma|Li-Fraumeni syndrome|Li-Fraumeni syndrome 1|Neoplasm of ovary|Hereditary cancer-predisposing syndrome|Adrenocortical carcinoma, hereditary [MedGen:C3661900|MONDO:MONDO:0018177,MeSH:D005909,MedGen:C0017636,Orphanet:360|Human Phenotype Ontology:HP:0030359,MONDO:MONDO:0005097,MedGen:C0149782|MONDO:MONDO:0006046,MedGen:C0279663|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|Human Phenotype Ontology:HP:0033770,MONDO:MONDO:0005036,MedGen:C0278701|MONDO:MONDO:0006485,MedGen:C0280630|Human Phenotype Ontology:HP:0001914,Human Phenotype Ontology:HP:0004808,Human Phenotype Ontology:HP:0004843,Human Phenotype Ontology:HP:0005516,Human Phenotype Ontology:HP:0006724,Human Phenotype Ontology:HP:0006728,MONDO:MONDO:0018874,MeSH:D015470,MedGen:C0023467,OMIM:601626,Orphanet:519|Human Phenotype Ontology:HP:0010623,Human Phenotype Ontology:HP:0100013,MONDO:MONDO:0021100,MeSH:D001943,MedGen:C1458155|Human Phenotype Ontology:HP:0006739,Human Phenotype Ontology:HP:0007614,MONDO:MONDO:0002529,MedGen:C0553723|Human Phenotype Ontology:HP:0006725,MONDO:MONDO:0006047,MedGen:C0281361|Human Phenotype Ontology:HP:0012056,MONDO:MONDO:0005012,MeSH:C562393,MedGen:C0151779|MedGen:C0153574|MONDO:MONDO:0003220,MedGen:C0235782|Human Phenotype Ontology:HP:0011459,MONDO:MONDO:0019086,MedGen:C0152018,Orphanet:70482|Human Phenotype Ontology:HP:0001402,Human Phenotype Ontology:HP:0002899,Human Phenotype Ontology:HP:0003007,Human Phenotype Ontology:HP:0006750,MONDO:MONDO:0007256,MedGen:C2239176,OMIM:114550,Orphanet:88673|Human Phenotype Ontology:HP:0030357,MONDO:MONDO:0008433,MeSH:D055752,MedGen:C0149925,OMIM:182280,Orphanet:70573|MONDO:MONDO:0010150,MeSH:D000077195,MedGen:C1168401,OMIM:275355,Orphanet:67037|Human Phenotype Ontology:HP:0030692,MONDO:MONDO:0021211,MeSH:D001932,MedGen:C0006118|Human Phenotype Ontology:HP:0030078,MONDO:MONDO:0005061,MeSH:D000077192,MedGen:C0152013|MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524|Gene:553989,MedGen:C1835398,OMIM:151623,Orphanet:524|Human Phenotype Ontology:HP:0100615,MONDO:MONDO:0021068,MeSH:D010051,MedGen:C0919267,OMIM:167000|MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162|MONDO:MONDO:0008734,MedGen:C1859972,OMIM:202300,Orphanet:1501] | |
179_HIS | GLN |
ClinVar chr17:7578393 |
rs876660821
|
Pathogenic/Likely pathogenic | - | Acute myeloid leukemia|Squamous cell carcinoma of the skin|Squamous cell lung carcinoma|Gallbladder carcinoma|Malignant melanoma of skin|Gastric adenocarcinoma|Neoplasm of brain|Glioblastoma|Malignant neoplasm of body of uterus|Lung adenocarcinoma|Small cell lung carcinoma|Pancreatic adenocarcinoma|Ovarian serous cystadenocarcinoma|Squamous cell carcinoma of the head and neck|Neoplasm of the large intestine|Uterine carcinosarcoma|Breast neoplasm|Hepatocellular carcinoma|Carcinoma of esophagus|Li-Fraumeni syndrome|Hereditary cancer-predisposing syndrome|not provided|Li-Fraumeni syndrome 1 [Human Phenotype Ontology:HP:0001914,Human Phenotype Ontology:HP:0004808,Human Phenotype Ontology:HP:0004843,Human Phenotype Ontology:HP:0005516,Human Phenotype Ontology:HP:0006724,Human Phenotype Ontology:HP:0006728,MONDO:MONDO:0018874,MeSH:D015470,MedGen:C0023467,OMIM:601626,Orphanet:519|Human Phenotype Ontology:HP:0006739,Human Phenotype Ontology:HP:0007614,MONDO:MONDO:0002529,MedGen:C0553723|Human Phenotype Ontology:HP:0030359,MONDO:MONDO:0005097,MedGen:C0149782|MONDO:MONDO:0003220,MedGen:C0235782|Human Phenotype Ontology:HP:0012056,MONDO:MONDO:0005012,MeSH:C562393,MedGen:C0151779|Human Phenotype Ontology:HP:0033770,MONDO:MONDO:0005036,MedGen:C0278701|Human Phenotype Ontology:HP:0030692,MONDO:MONDO:0021211,MeSH:D001932,MedGen:C0006118|MONDO:MONDO:0018177,MeSH:D005909,MedGen:C0017636,Orphanet:360|MedGen:C0153574|Human Phenotype Ontology:HP:0030078,MONDO:MONDO:0005061,MeSH:D000077192,MedGen:C0152013|Human Phenotype Ontology:HP:0030357,MONDO:MONDO:0008433,MeSH:D055752,MedGen:C0149925,OMIM:182280,Orphanet:70573|Human Phenotype Ontology:HP:0006725,MONDO:MONDO:0006047,MedGen:C0281361|MONDO:MONDO:0006046,MedGen:C0279663|MONDO:MONDO:0010150,MeSH:D000077195,MedGen:C1168401,OMIM:275355,Orphanet:67037|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|MONDO:MONDO:0006485,MedGen:C0280630|Human Phenotype Ontology:HP:0010623,Human Phenotype Ontology:HP:0100013,MONDO:MONDO:0021100,MeSH:D001943,MedGen:C1458155|Human Phenotype Ontology:HP:0001402,Human Phenotype Ontology:HP:0002899,Human Phenotype Ontology:HP:0003007,Human Phenotype Ontology:HP:0006750,MONDO:MONDO:0007256,MedGen:C2239176,OMIM:114550,Orphanet:88673|Human Phenotype Ontology:HP:0011459,MONDO:MONDO:0019086,MedGen:C0152018,Orphanet:70482|MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524|MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162|MedGen:C3661900|Gene:553989,MedGen:C1835398,OMIM:151623,Orphanet:524] | |
179_HIS | GLN |
ClinVar chr17:7578393 |
rs876660821
|
Pathogenic | - | Li-Fraumeni syndrome|Hereditary cancer-predisposing syndrome|Neoplasm of ovary|Acute myeloid leukemia [MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524|MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162|Human Phenotype Ontology:HP:0100615,MONDO:MONDO:0021068,MeSH:D010051,MedGen:C0919267,OMIM:167000|Human Phenotype Ontology:HP:0001914,Human Phenotype Ontology:HP:0004808,Human Phenotype Ontology:HP:0004843,Human Phenotype Ontology:HP:0005516,Human Phenotype Ontology:HP:0006724,Human Phenotype Ontology:HP:0006728,MONDO:MONDO:0018874,MeSH:D015470,MedGen:C0023467,OMIM:601626,Orphanet:519] | |
180_GLU | ALA | VAR_044940 |
-
|
US | - | A sporadic cancer | |
180_GLU | ASP | VAR_044941 |
-
|
US | - | Sporadic cancers | |
180_GLU | GLY | VAR_044942 |
-
|
US | - | A sporadic cancer | |
180_GLU | LYS | VAR_044943 |
rs879253911
|
LP/P | - | Li-Fraumeni syndrome (LFS) [MIM:151623] | |
180_GLU | GLN | VAR_044944 |
-
|
US | - | Sporadic cancers | |
180_GLU | VAL | VAR_044945 |
-
|
US | - | A sporadic cancer | |
180_GLU | LYS |
ClinVar chr17:7578392 |
rs879253911
|
Likely pathogenic | - | not provided|Li-Fraumeni syndrome|Hereditary cancer-predisposing syndrome [MedGen:C3661900|MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524|MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162] | |
180_GLU | TER |
ClinVar chr17:7578392 |
rs879253911
|
Pathogenic | - | Neoplasm of ovary [Human Phenotype Ontology:HP:0100615,MONDO:MONDO:0021068,MeSH:D010051,MedGen:C0919267,OMIM:167000] | |
181_ARG | LEU | VAR_005937 |
rs397514495
|
US | - | A familial cancer not matching LFS | |
181_ARG | CYS | VAR_044946 |
rs587782596
|
LP/P | - | Li-Fraumeni syndrome (LFS) [MIM:151623] | |
181_ARG | GLY | VAR_044947 |
-
|
US | - | Sporadic cancers | |
181_ARG | HIS | VAR_044948 |
rs397514495
|
LP/P | - | Li-Fraumeni syndrome (LFS) [MIM:151623] | |
181_ARG | PRO | VAR_044949 |
-
|
US | - | A familial cancer not matching LFS | |
181_ARG | SER | VAR_044950 |
rs587782596
|
US | - | Sporadic cancers | |
181_ARG | PRO |
ClinVar chr17:7578388 |
rs397514495
|
Pathogenic/Likely pathogenic | - | Hereditary cancer-predisposing syndrome|Li-Fraumeni syndrome|Li-Fraumeni syndrome 1 [MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162|MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524|Gene:553989,MedGen:C1835398,OMIM:151623,Orphanet:524] | |
182_CYS | SER | VAR_005938 |
-
|
US | - | Sporadic cancers | |
182_CYS | ARG | VAR_044951 |
-
|
US | - | Sporadic cancers | |
182_CYS | TYR | VAR_044952 |
-
|
US | - | Sporadic cancers | |
183_SER | LEU | VAR_044953 |
rs1555525970
|
US | - | Sporadic cancers | |
183_SER | PRO | VAR_044954 |
-
|
US | - | Sporadic cancers | |
183_SER | TER |
ClinVar chr17:7578382 |
rs1555525970
|
Pathogenic | - | Neoplasm of ovary|Li-Fraumeni syndrome [Human Phenotype Ontology:HP:0100615,MONDO:MONDO:0021068,MeSH:D010051,MedGen:C0919267,OMIM:167000|MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524] | |
183_SER | SER |
ClinVar chr17:7578381 |
-
|
Pathogenic | - | Acute myeloid leukemia [Human Phenotype Ontology:HP:0001914,Human Phenotype Ontology:HP:0004808,Human Phenotype Ontology:HP:0004843,Human Phenotype Ontology:HP:0005516,Human Phenotype Ontology:HP:0006724,Human Phenotype Ontology:HP:0006728,MONDO:MONDO:0018874,MeSH:D015470,MedGen:C0023467,OMIM:601626,Orphanet:519] | |
184_ASP | TYR | VAR_005939 |
-
|
US | - | Sporadic cancers | |
184_ASP | GLY | VAR_044955 |
rs1060501209
|
US | - | Sporadic cancers | |
184_ASP | HIS | VAR_044956 |
-
|
US | - | Sporadic cancers | |
184_ASP | VAL | VAR_044957 |
-
|
US | - | Sporadic cancers | |
184_ASP | ASN | VAR_047169 |
rs72661117
|
US | - | Sporadic cancers | |
185_SER | CYS | VAR_044958 |
-
|
US | - | A sporadic cancer | |
185_SER | GLY | VAR_044959 |
-
|
US | - | Sporadic cancers | |
185_SER | ILE | VAR_044960 |
-
|
US | - | Sporadic cancers | |
185_SER | ASN | VAR_044961 |
rs150607408
|
US | - | A sporadic cancer | |
185_SER | ARG | VAR_044962 |
-
|
US | - | Sporadic cancers | |
185_SER | THR | VAR_044963 |
-
|
US | - | A sporadic cancer | |
186_ASP | TYR | VAR_005940 |
-
|
US | - | A sporadic cancer | |
186_ASP | GLU | VAR_044964 |
rs375275361
|
US | - | A sporadic cancer | |
186_ASP | GLY | VAR_044965 |
-
|
US | - | Sporadic cancers | |
186_ASP | HIS | VAR_044966 |
-
|
US | - | Sporadic cancers | |
186_ASP | ASN | VAR_044967 |
rs1060501206
|
US | - | Sporadic cancers | |
186_ASP | VAL | VAR_044968 |
-
|
US | - | Sporadic cancers | |
187_GLY | CYS | VAR_005941 |
-
|
US | - | Sporadic cancers | |
187_GLY | SER | VAR_005942 |
rs776167460
|
US | - | Sporadic cancers | |
187_GLY | ASP | VAR_044969 |
-
|
US | - | Sporadic cancers | |
187_GLY | ARG | VAR_044970 |
-
|
US | - | Sporadic cancers | |
187_GLY | VAL | VAR_044971 |
-
|
US | - | Sporadic cancers | |
187_GLY | ASN | VAR_045805 |
-
|
US | - | A sporadic cancer | |
188_LEU | PRO | VAR_044972 |
rs1199893366
|
US | - | A sporadic cancer | |
188_LEU | VAL | VAR_044973 |
-
|
US | - | Sporadic cancers | |
189_ALA | PRO | VAR_005943 |
-
|
US | - | Sporadic cancers | |
189_ALA | ASP | VAR_044974 |
-
|
US | - | A sporadic cancer | |
189_ALA | GLY | VAR_044975 |
-
|
US | - | Sporadic cancers | |
189_ALA | SER | VAR_044976 |
rs1555525921
|
US | - | A sporadic cancer | |
189_ALA | THR | VAR_044977 |
-
|
US | - | Sporadic cancers | |
189_ALA | VAL | VAR_044978 |
rs121912665
|
US | - | A familial cancer not matching LFS | |
189_ALA | VAL |
8.3kJPN chr17:7578283 |
rs121912665
|
- | 0.0021 | - | |
190_PRO | LEU | VAR_005944 |
rs876660825
|
US | - | Sporadic cancers | |
190_PRO | ALA | VAR_044979 |
-
|
US | - | Sporadic cancers | |
190_PRO | HIS | VAR_044980 |
-
|
US | - | A sporadic cancer | |
190_PRO | ARG | VAR_044981 |
rs876660825
|
US | - | Sporadic cancers | |
190_PRO | SER | VAR_044982 |
-
|
US | - | Sporadic cancers | |
190_PRO | THR | VAR_044983 |
rs876660254
|
US | - | Sporadic cancers | |
190_PRO | LEU |
ClinVar chr17:7578280 |
rs876660825
|
Likely pathogenic | - | not provided|Li-Fraumeni syndrome|Li-Fraumeni syndrome 1|Hereditary cancer-predisposing syndrome [MedGen:C3661900|MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524|Gene:553989,MedGen:C1835398,OMIM:151623,Orphanet:524|MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162] | |
191_PRO | THR | VAR_005945 |
-
|
US | - | Sporadic cancers | |
191_PRO | HIS | VAR_044984 |
rs587778718
|
US | - | Sporadic cancers | |
191_PRO | LEU | VAR_044985 |
rs587778718
|
US | - | Sporadic cancers | |
191_PRO | ARG | VAR_044986 |
rs587778718
|
US | - | Sporadic cancers | |
191_PRO | SER | VAR_044987 |
rs868590738
|
US | - | Sporadic cancers | |
192_GLN | ARG | VAR_005946 |
rs730882002
|
US | - | Sporadic cancers | |
192_GLN | HIS | VAR_044988 |
-
|
US | - | Sporadic cancers | |
192_GLN | LYS | VAR_044989 |
-
|
US | - | A sporadic cancer | |
192_GLN | LEU | VAR_044990 |
-
|
US | - | Sporadic cancers | |
192_GLN | PRO | VAR_044991 |
-
|
US | - | Sporadic cancers | |
192_GLN | TER |
ClinVar chr17:7578275 |
rs866380588
|
Pathogenic | - | Li-Fraumeni syndrome|Hereditary cancer-predisposing syndrome|Malignant tumor of breast|Li-Fraumeni syndrome 1 [MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524|MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162|MONDO:MONDO:0007254,MedGen:C0006142|Gene:553989,MedGen:C1835398,OMIM:151623,Orphanet:524] | |
193_HIS | ASP | VAR_005947 |
rs876658468
|
US | - | Sporadic cancers | |
193_HIS | ARG | VAR_005948 |
rs786201838
|
LP/P | - | Li-Fraumeni syndrome (LFS) [MIM:151623] | |
193_HIS | LEU | VAR_044992 |
rs786201838
|
US | - | Sporadic cancers | |
193_HIS | ASN | VAR_044993 |
rs876658468
|
US | - | Sporadic cancers | |
193_HIS | PRO | VAR_044994 |
rs786201838
|
US | - | Sporadic cancers | |
193_HIS | GLN | VAR_044995 |
-
|
US | - | Sporadic cancers | |
193_HIS | TYR | VAR_044996 |
rs876658468
|
US | - | Sporadic cancers | |
193_HIS | ARG |
ClinVar chr17:7578271 |
rs786201838
|
Pathogenic/Likely pathogenic | - | Hereditary cancer-predisposing syndrome|not provided|Breast neoplasm|Gastric adenocarcinoma|Lung adenocarcinoma|Uterine carcinosarcoma|B-cell chronic lymphocytic leukemia|Pancreatic adenocarcinoma|Prostate adenocarcinoma|Carcinoma of esophagus|Transitional cell carcinoma of the bladder|Small cell lung carcinoma|Squamous cell carcinoma of the head and neck|Neoplasm of brain|Brainstem glioma|Ovarian serous cystadenocarcinoma|Acute myeloid leukemia|Hepatocellular carcinoma|Neoplasm of the large intestine|Squamous cell lung carcinoma|Papillary renal cell carcinoma, sporadic|Malignant neoplasm of body of uterus|Li-Fraumeni syndrome|Neoplasm of ovary|Li-Fraumeni syndrome 1|Adrenocortical carcinoma, hereditary [MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162|MedGen:C3661900|Human Phenotype Ontology:HP:0010623,Human Phenotype Ontology:HP:0100013,MONDO:MONDO:0021100,MeSH:D001943,MedGen:C1458155|Human Phenotype Ontology:HP:0033770,MONDO:MONDO:0005036,MedGen:C0278701|Human Phenotype Ontology:HP:0030078,MONDO:MONDO:0005061,MeSH:D000077192,MedGen:C0152013|MONDO:MONDO:0006485,MedGen:C0280630|Human Phenotype Ontology:HP:0005550,Human Phenotype Ontology:HP:0006734,Human Phenotype Ontology:HP:0006760,MONDO:MONDO:0004948,MeSH:D015451,MedGen:C0023434,OMIM:151400,Orphanet:67038|Human Phenotype Ontology:HP:0006725,MONDO:MONDO:0006047,MedGen:C0281361|MONDO:MONDO:0005082,MedGen:C0007112|Human Phenotype Ontology:HP:0011459,MONDO:MONDO:0019086,MedGen:C0152018,Orphanet:70482|Human Phenotype Ontology:HP:0006740,MONDO:MONDO:0005611,MedGen:C0279680|Human Phenotype Ontology:HP:0030357,MONDO:MONDO:0008433,MeSH:D055752,MedGen:C0149925,OMIM:182280,Orphanet:70573|MONDO:MONDO:0010150,MeSH:D000077195,MedGen:C1168401,OMIM:275355,Orphanet:67037|Human Phenotype Ontology:HP:0030692,MONDO:MONDO:0021211,MeSH:D001932,MedGen:C0006118|Human Phenotype Ontology:HP:0010796,MONDO:MONDO:0002911,MedGen:C0677865|MONDO:MONDO:0006046,MedGen:C0279663|Human Phenotype Ontology:HP:0001914,Human Phenotype Ontology:HP:0004808,Human Phenotype Ontology:HP:0004843,Human Phenotype Ontology:HP:0005516,Human Phenotype Ontology:HP:0006724,Human Phenotype Ontology:HP:0006728,MONDO:MONDO:0018874,MeSH:D015470,MedGen:C0023467,OMIM:601626,Orphanet:519|Human Phenotype Ontology:HP:0001402,Human Phenotype Ontology:HP:0002899,Human Phenotype Ontology:HP:0003007,Human Phenotype Ontology:HP:0006750,MONDO:MONDO:0007256,MedGen:C2239176,OMIM:114550,Orphanet:88673|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|Human Phenotype Ontology:HP:0030359,MONDO:MONDO:0005097,MedGen:C0149782|MeSH:C538614,MedGen:C1336078|MedGen:C0153574|MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524|Human Phenotype Ontology:HP:0100615,MONDO:MONDO:0021068,MeSH:D010051,MedGen:C0919267,OMIM:167000|Gene:553989,MedGen:C1835398,OMIM:151623,Orphanet:524|MONDO:MONDO:0008734,MedGen:C1859972,OMIM:202300,Orphanet:1501] | |
193_HIS | TYR |
ClinVar chr17:7578272 |
rs876658468
|
Pathogenic/Likely pathogenic | - | Hereditary cancer-predisposing syndrome|Gastric adenocarcinoma|Neoplasm of the large intestine|Squamous cell lung carcinoma|B-cell chronic lymphocytic leukemia|Small cell lung carcinoma|Neoplasm of brain|Uterine carcinosarcoma|Transitional cell carcinoma of the bladder|Ovarian serous cystadenocarcinoma|not provided|Pancreatic adenocarcinoma|Papillary renal cell carcinoma, sporadic|Hepatocellular carcinoma|Squamous cell carcinoma of the head and neck|Brainstem glioma|Malignant neoplasm of body of uterus|Prostate adenocarcinoma|Lung adenocarcinoma|Carcinoma of esophagus|Acute myeloid leukemia|Breast neoplasm|Li-Fraumeni syndrome|Li-Fraumeni syndrome 1|Malignant tumor of urinary bladder [MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162|Human Phenotype Ontology:HP:0033770,MONDO:MONDO:0005036,MedGen:C0278701|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|Human Phenotype Ontology:HP:0030359,MONDO:MONDO:0005097,MedGen:C0149782|Human Phenotype Ontology:HP:0005550,Human Phenotype Ontology:HP:0006734,Human Phenotype Ontology:HP:0006760,MONDO:MONDO:0004948,MeSH:D015451,MedGen:C0023434,OMIM:151400,Orphanet:67038|Human Phenotype Ontology:HP:0030357,MONDO:MONDO:0008433,MeSH:D055752,MedGen:C0149925,OMIM:182280,Orphanet:70573|Human Phenotype Ontology:HP:0030692,MONDO:MONDO:0021211,MeSH:D001932,MedGen:C0006118|MONDO:MONDO:0006485,MedGen:C0280630|Human Phenotype Ontology:HP:0006740,MONDO:MONDO:0005611,MedGen:C0279680|MONDO:MONDO:0006046,MedGen:C0279663|MedGen:C3661900|Human Phenotype Ontology:HP:0006725,MONDO:MONDO:0006047,MedGen:C0281361|MeSH:C538614,MedGen:C1336078|Human Phenotype Ontology:HP:0001402,Human Phenotype Ontology:HP:0002899,Human Phenotype Ontology:HP:0003007,Human Phenotype Ontology:HP:0006750,MONDO:MONDO:0007256,MedGen:C2239176,OMIM:114550,Orphanet:88673|MONDO:MONDO:0010150,MeSH:D000077195,MedGen:C1168401,OMIM:275355,Orphanet:67037|Human Phenotype Ontology:HP:0010796,MONDO:MONDO:0002911,MedGen:C0677865|MedGen:C0153574|MONDO:MONDO:0005082,MedGen:C0007112|Human Phenotype Ontology:HP:0030078,MONDO:MONDO:0005061,MeSH:D000077192,MedGen:C0152013|Human Phenotype Ontology:HP:0011459,MONDO:MONDO:0019086,MedGen:C0152018,Orphanet:70482|Human Phenotype Ontology:HP:0001914,Human Phenotype Ontology:HP:0004808,Human Phenotype Ontology:HP:0004843,Human Phenotype Ontology:HP:0005516,Human Phenotype Ontology:HP:0006724,Human Phenotype Ontology:HP:0006728,MONDO:MONDO:0018874,MeSH:D015470,MedGen:C0023467,OMIM:601626,Orphanet:519|Human Phenotype Ontology:HP:0010623,Human Phenotype Ontology:HP:0100013,MONDO:MONDO:0021100,MeSH:D001943,MedGen:C1458155|MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524|Gene:553989,MedGen:C1835398,OMIM:151623,Orphanet:524|MONDO:MONDO:0001187,MedGen:C0005684,OMIM:109800,Orphanet:157980] | |
193_HIS | PRO |
ClinVar chr17:7578271 |
rs786201838
|
Pathogenic | - | Prostate adenocarcinoma|Neoplasm of the large intestine|Squamous cell lung carcinoma|Carcinoma of esophagus|Small cell lung carcinoma|Pancreatic adenocarcinoma|Papillary renal cell carcinoma, sporadic|Acute myeloid leukemia|Brainstem glioma|Gastric adenocarcinoma|Squamous cell carcinoma of the head and neck|Lung adenocarcinoma|Neoplasm of brain|B-cell chronic lymphocytic leukemia|Transitional cell carcinoma of the bladder|Uterine carcinosarcoma|Breast neoplasm|Malignant neoplasm of body of uterus|Ovarian serous cystadenocarcinoma|Hepatocellular carcinoma|Li-Fraumeni syndrome|Hereditary cancer-predisposing syndrome [MONDO:MONDO:0005082,MedGen:C0007112|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|Human Phenotype Ontology:HP:0030359,MONDO:MONDO:0005097,MedGen:C0149782|Human Phenotype Ontology:HP:0011459,MONDO:MONDO:0019086,MedGen:C0152018,Orphanet:70482|Human Phenotype Ontology:HP:0030357,MONDO:MONDO:0008433,MeSH:D055752,MedGen:C0149925,OMIM:182280,Orphanet:70573|Human Phenotype Ontology:HP:0006725,MONDO:MONDO:0006047,MedGen:C0281361|MeSH:C538614,MedGen:C1336078|Human Phenotype Ontology:HP:0001914,Human Phenotype Ontology:HP:0004808,Human Phenotype Ontology:HP:0004843,Human Phenotype Ontology:HP:0005516,Human Phenotype Ontology:HP:0006724,Human Phenotype Ontology:HP:0006728,MONDO:MONDO:0018874,MeSH:D015470,MedGen:C0023467,OMIM:601626,Orphanet:519|Human Phenotype Ontology:HP:0010796,MONDO:MONDO:0002911,MedGen:C0677865|Human Phenotype Ontology:HP:0033770,MONDO:MONDO:0005036,MedGen:C0278701|MONDO:MONDO:0010150,MeSH:D000077195,MedGen:C1168401,OMIM:275355,Orphanet:67037|Human Phenotype Ontology:HP:0030078,MONDO:MONDO:0005061,MeSH:D000077192,MedGen:C0152013|Human Phenotype Ontology:HP:0030692,MONDO:MONDO:0021211,MeSH:D001932,MedGen:C0006118|Human Phenotype Ontology:HP:0005550,Human Phenotype Ontology:HP:0006734,Human Phenotype Ontology:HP:0006760,MONDO:MONDO:0004948,MeSH:D015451,MedGen:C0023434,OMIM:151400,Orphanet:67038|Human Phenotype Ontology:HP:0006740,MONDO:MONDO:0005611,MedGen:C0279680|MONDO:MONDO:0006485,MedGen:C0280630|Human Phenotype Ontology:HP:0010623,Human Phenotype Ontology:HP:0100013,MONDO:MONDO:0021100,MeSH:D001943,MedGen:C1458155|MedGen:C0153574|MONDO:MONDO:0006046,MedGen:C0279663|Human Phenotype Ontology:HP:0001402,Human Phenotype Ontology:HP:0002899,Human Phenotype Ontology:HP:0003007,Human Phenotype Ontology:HP:0006750,MONDO:MONDO:0007256,MedGen:C2239176,OMIM:114550,Orphanet:88673|MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524|MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162] | |
193_HIS | ASN |
ClinVar chr17:7578272 |
rs876658468
|
Likely pathogenic | - | Lung adenocarcinoma|Pancreatic adenocarcinoma|Transitional cell carcinoma of the bladder|Papillary renal cell carcinoma, sporadic|Uterine carcinosarcoma|Squamous cell carcinoma of the head and neck|Brainstem glioma|Small cell lung carcinoma|Carcinoma of esophagus|Ovarian serous cystadenocarcinoma|B-cell chronic lymphocytic leukemia|Hepatocellular carcinoma|Breast neoplasm|Acute myeloid leukemia|Prostate adenocarcinoma|Malignant neoplasm of body of uterus|Neoplasm of brain|Gastric adenocarcinoma|Neoplasm of the large intestine|Squamous cell lung carcinoma [Human Phenotype Ontology:HP:0030078,MONDO:MONDO:0005061,MeSH:D000077192,MedGen:C0152013|Human Phenotype Ontology:HP:0006725,MONDO:MONDO:0006047,MedGen:C0281361|Human Phenotype Ontology:HP:0006740,MONDO:MONDO:0005611,MedGen:C0279680|MeSH:C538614,MedGen:C1336078|MONDO:MONDO:0006485,MedGen:C0280630|MONDO:MONDO:0010150,MeSH:D000077195,MedGen:C1168401,OMIM:275355,Orphanet:67037|Human Phenotype Ontology:HP:0010796,MONDO:MONDO:0002911,MedGen:C0677865|Human Phenotype Ontology:HP:0030357,MONDO:MONDO:0008433,MeSH:D055752,MedGen:C0149925,OMIM:182280,Orphanet:70573|Human Phenotype Ontology:HP:0011459,MONDO:MONDO:0019086,MedGen:C0152018,Orphanet:70482|MONDO:MONDO:0006046,MedGen:C0279663|Human Phenotype Ontology:HP:0005550,Human Phenotype Ontology:HP:0006734,Human Phenotype Ontology:HP:0006760,MONDO:MONDO:0004948,MeSH:D015451,MedGen:C0023434,OMIM:151400,Orphanet:67038|Human Phenotype Ontology:HP:0001402,Human Phenotype Ontology:HP:0002899,Human Phenotype Ontology:HP:0003007,Human Phenotype Ontology:HP:0006750,MONDO:MONDO:0007256,MedGen:C2239176,OMIM:114550,Orphanet:88673|Human Phenotype Ontology:HP:0010623,Human Phenotype Ontology:HP:0100013,MONDO:MONDO:0021100,MeSH:D001943,MedGen:C1458155|Human Phenotype Ontology:HP:0001914,Human Phenotype Ontology:HP:0004808,Human Phenotype Ontology:HP:0004843,Human Phenotype Ontology:HP:0005516,Human Phenotype Ontology:HP:0006724,Human Phenotype Ontology:HP:0006728,MONDO:MONDO:0018874,MeSH:D015470,MedGen:C0023467,OMIM:601626,Orphanet:519|MONDO:MONDO:0005082,MedGen:C0007112|MedGen:C0153574|Human Phenotype Ontology:HP:0030692,MONDO:MONDO:0021211,MeSH:D001932,MedGen:C0006118|Human Phenotype Ontology:HP:0033770,MONDO:MONDO:0005036,MedGen:C0278701|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|Human Phenotype Ontology:HP:0030359,MONDO:MONDO:0005097,MedGen:C0149782] | |
193_HIS | GLN |
ClinVar chr17:7578270 |
rs1597368777
|
Likely pathogenic | - | Hereditary cancer-predisposing syndrome [MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162] | |
194_LEU | PRO | VAR_005949 |
rs1057519998
|
US | - | Sporadic cancers | |
194_LEU | ARG | VAR_005950 |
rs1057519998
|
US | - | Sporadic cancers | |
194_LEU | PHE | VAR_044997 |
rs587780071
|
US | - | Sporadic cancers | |
194_LEU | HIS | VAR_044998 |
rs1057519998
|
US | - | Sporadic cancers | |
194_LEU | ILE | VAR_044999 |
-
|
US | - | Sporadic cancers | |
194_LEU | VAL | VAR_045000 |
-
|
US | - | Sporadic cancers | |
194_LEU | PHE |
ClinVar chr17:7578269 |
rs587780071
|
Pathogenic/Likely pathogenic | - | not provided|Breast neoplasm|Ovarian serous cystadenocarcinoma|Lung adenocarcinoma|Hepatocellular carcinoma|Neoplasm of uterine cervix|Neoplasm of brain|Transitional cell carcinoma of the bladder|Squamous cell carcinoma of the head and neck|Glioblastoma|Pancreatic adenocarcinoma|Neoplasm of the large intestine|Li-Fraumeni syndrome|Hereditary cancer-predisposing syndrome|Li-Fraumeni syndrome 1 [MedGen:C3661900|Human Phenotype Ontology:HP:0010623,Human Phenotype Ontology:HP:0100013,MONDO:MONDO:0021100,MeSH:D001943,MedGen:C1458155|MONDO:MONDO:0006046,MedGen:C0279663|Human Phenotype Ontology:HP:0030078,MONDO:MONDO:0005061,MeSH:D000077192,MedGen:C0152013|Human Phenotype Ontology:HP:0001402,Human Phenotype Ontology:HP:0002899,Human Phenotype Ontology:HP:0003007,Human Phenotype Ontology:HP:0006750,MONDO:MONDO:0007256,MedGen:C2239176,OMIM:114550,Orphanet:88673|Human Phenotype Ontology:HP:0032241,MONDO:MONDO:0021230,MeSH:D002583,MedGen:C0007873|Human Phenotype Ontology:HP:0030692,MONDO:MONDO:0021211,MeSH:D001932,MedGen:C0006118|Human Phenotype Ontology:HP:0006740,MONDO:MONDO:0005611,MedGen:C0279680|MONDO:MONDO:0010150,MeSH:D000077195,MedGen:C1168401,OMIM:275355,Orphanet:67037|MONDO:MONDO:0018177,MeSH:D005909,MedGen:C0017636,Orphanet:360|Human Phenotype Ontology:HP:0006725,MONDO:MONDO:0006047,MedGen:C0281361|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524|MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162|Gene:553989,MedGen:C1835398,OMIM:151623,Orphanet:524] | |
195_ILE | THR | VAR_005951 |
rs760043106
|
US | - | Sporadic cancers | |
195_ILE | PHE | VAR_045001 |
rs942158624
|
US | - | Sporadic cancers | |
195_ILE | ASN | VAR_045002 |
rs760043106
|
US | - | Sporadic cancers | |
195_ILE | SER | VAR_045003 |
rs760043106
|
US | - | Sporadic cancers | |
195_ILE | VAL | VAR_045004 |
-
|
US | - | A sporadic cancer | |
195_ILE | TYR | VAR_045806 |
-
|
US | - | A sporadic cancer | |
195_ILE | LEU | VAR_047172 |
-
|
US | - | A sporadic cancer | |
196_ARG | GLY | VAR_045005 |
rs397516435
|
US | - | Sporadic cancers | |
196_ARG | LEU | VAR_045006 |
rs483352697
|
US | - | Sporadic cancers | |
196_ARG | PRO | VAR_045007 |
rs483352697
|
LP/P | - | Li-Fraumeni syndrome (LFS) [MIM:151623] | |
196_ARG | GLN | VAR_045008 |
rs483352697
|
US | - | Sporadic cancers | |
196_ARG | SER | VAR_045009 |
-
|
US | - | A sporadic cancer | |
196_ARG | TER |
ClinVar chr17:7578263 |
rs397516435
|
Pathogenic | - | Hereditary cancer-predisposing syndrome|Li-Fraumeni syndrome|not provided|Neoplasm of ovary|Li-Fraumeni syndrome 1|not specified|Adrenocortical carcinoma, hereditary [MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162|MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524|MedGen:C3661900|Human Phenotype Ontology:HP:0100615,MONDO:MONDO:0021068,MeSH:D010051,MedGen:C0919267,OMIM:167000|Gene:553989,MedGen:C1835398,OMIM:151623,Orphanet:524|MedGen:CN169374|MONDO:MONDO:0008734,MedGen:C1859972,OMIM:202300,Orphanet:1501] | |
196_ARG | PRO |
ClinVar chr17:7578262 |
rs483352697
|
Pathogenic/Likely pathogenic | - | Hereditary cancer-predisposing syndrome|Squamous cell carcinoma of the skin|Neoplasm of the large intestine|Squamous cell carcinoma of the head and neck|Pancreatic adenocarcinoma|Papillary renal cell carcinoma type 1|Carcinoma of esophagus|Small cell lung carcinoma|Gastric adenocarcinoma|Glioblastoma|Breast neoplasm|Squamous cell lung carcinoma|Neoplasm of brain|Ovarian serous cystadenocarcinoma|Lung adenocarcinoma|Malignant melanoma of skin|Multiple myeloma|Li-Fraumeni syndrome [MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162|Human Phenotype Ontology:HP:0006739,Human Phenotype Ontology:HP:0007614,MONDO:MONDO:0002529,MedGen:C0553723|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|MONDO:MONDO:0010150,MeSH:D000077195,MedGen:C1168401,OMIM:275355,Orphanet:67037|Human Phenotype Ontology:HP:0006725,MONDO:MONDO:0006047,MedGen:C0281361|Human Phenotype Ontology:HP:0011797,MedGen:C1336839,OMIM:605074,Orphanet:47044|Human Phenotype Ontology:HP:0011459,MONDO:MONDO:0019086,MedGen:C0152018,Orphanet:70482|Human Phenotype Ontology:HP:0030357,MONDO:MONDO:0008433,MeSH:D055752,MedGen:C0149925,OMIM:182280,Orphanet:70573|Human Phenotype Ontology:HP:0033770,MONDO:MONDO:0005036,MedGen:C0278701|MONDO:MONDO:0018177,MeSH:D005909,MedGen:C0017636,Orphanet:360|Human Phenotype Ontology:HP:0010623,Human Phenotype Ontology:HP:0100013,MONDO:MONDO:0021100,MeSH:D001943,MedGen:C1458155|Human Phenotype Ontology:HP:0030359,MONDO:MONDO:0005097,MedGen:C0149782|Human Phenotype Ontology:HP:0030692,MONDO:MONDO:0021211,MeSH:D001932,MedGen:C0006118|MONDO:MONDO:0006046,MedGen:C0279663|Human Phenotype Ontology:HP:0030078,MONDO:MONDO:0005061,MeSH:D000077192,MedGen:C0152013|Human Phenotype Ontology:HP:0012056,MONDO:MONDO:0005012,MeSH:C562393,MedGen:C0151779|Human Phenotype Ontology:HP:0006775,MONDO:MONDO:0009693,MeSH:D009101,MedGen:C0026764,OMIM:254500,Orphanet:29073,Orphanet:85443|MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524] | |
197_VAL | GLU | VAR_045010 |
-
|
US | - | A familial cancer not matching LFS | |
197_VAL | GLY | VAR_045011 |
-
|
US | - | Sporadic cancers | |
197_VAL | LEU | VAR_045012 |
rs786204041
|
US | - | Sporadic cancers | |
197_VAL | MET | VAR_045013 |
rs786204041
|
LP/P | - | Li-Fraumeni syndrome (LFS) [MIM:151623] | |
198_GLU | LYS | VAR_005952 |
-
|
US | - | Sporadic cancers | |
198_GLU | ASP | VAR_045014 |
-
|
US | - | A sporadic cancer | |
198_GLU | GLY | VAR_045015 |
-
|
US | - | Sporadic cancers | |
198_GLU | GLN | VAR_045016 |
-
|
US | - | Sporadic cancers | |
198_GLU | VAL | VAR_045017 |
-
|
US | - | A sporadic cancer | |
198_GLU | TER |
ClinVar chr17:7578257 |
rs1567551854
|
Pathogenic | - | Neoplasm of ovary|Li-Fraumeni syndrome [Human Phenotype Ontology:HP:0100615,MONDO:MONDO:0021068,MeSH:D010051,MedGen:C0919267,OMIM:167000|MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524] | |
199_GLY | ALA | VAR_045018 |
-
|
US | - | A sporadic cancer | |
199_GLY | GLU | VAR_045019 |
-
|
US | - | Sporadic cancers | |
199_GLY | ARG | VAR_045020 |
-
|
US | - | Sporadic cancers | |
199_GLY | VAL | VAR_045021 |
rs1555525857
|
US | - | Sporadic cancers | |
199_GLY | VAL |
ClinVar chr17:7578253 |
rs1555525857
|
Likely pathogenic | - | not provided [MedGen:CN517202] | |
199_GLY | TER |
ClinVar chr17:7578254 |
rs1567551821
|
Pathogenic | - | Neoplasm of ovary [Human Phenotype Ontology:HP:0100615,MONDO:MONDO:0021068,MeSH:D010051,MedGen:C0919267,OMIM:167000] | |
200_ASN | ASP | VAR_045022 |
-
|
US | - | Sporadic cancers | |
200_ASN | ILE | VAR_045023 |
-
|
US | - | Sporadic cancers | |
200_ASN | LYS | VAR_045024 |
-
|
US | - | A sporadic cancer | |
200_ASN | SER | VAR_045025 |
-
|
US | - | Sporadic cancers | |
200_ASN | THR | VAR_045026 |
-
|
US | - | A sporadic cancer | |
200_ASN | PRO | VAR_045807 |
-
|
US | - | A sporadic cancer | |
201_LEU | PHE | VAR_045027 |
rs730882024
|
US | - | Sporadic cancers | |
201_LEU | PRO | VAR_045028 |
-
|
US | - | A sporadic cancer | |
201_LEU | SER | VAR_045029 |
-
|
US | - | A sporadic cancer | |
202_ARG | CYS | VAR_045030 |
rs587780072
|
US | - | Sporadic cancers | |
202_ARG | GLY | VAR_045031 |
rs587780072
|
US | - | Sporadic cancers | |
202_ARG | HIS | VAR_045032 |
rs587778719
|
US | - | Sporadic cancers | |
202_ARG | LEU | VAR_045033 |
rs587778719
|
US | - | Sporadic cancers | |
202_ARG | PRO | VAR_045034 |
-
|
US | - | Sporadic cancers | |
202_ARG | SER | VAR_045035 |
-
|
US | - | Sporadic cancers | |
203_VAL | ALA | VAR_045036 |
-
|
US | - | Sporadic cancers | |
203_VAL | GLU | VAR_045037 |
-
|
US | - | Sporadic cancers | |
203_VAL | LEU | VAR_045038 |
-
|
US | - | Sporadic cancers | |
203_VAL | MET | VAR_045039 |
rs730882003
|
US | - | Sporadic cancers | |
203_VAL | TRP | VAR_045808 |
-
|
US | - | A sporadic cancer | |
204_GLU | ALA | VAR_045040 |
-
|
US | - | Sporadic cancers | |
204_GLU | ASP | VAR_045041 |
-
|
US | - | Sporadic cancers | |
204_GLU | GLY | VAR_045042 |
rs1260903787
|
US | - | Sporadic cancers | |
204_GLU | LYS | VAR_045043 |
-
|
US | - | Sporadic cancers | |
204_GLU | GLN | VAR_045044 |
-
|
US | - | A sporadic cancer | |
204_GLU | VAL | VAR_045045 |
-
|
US | - | A sporadic cancer | |
204_GLU | TER |
ClinVar chr17:7578239 |
rs2073336758
|
Pathogenic | - | Lip and oral cavity carcinoma|Hereditary cancer-predisposing syndrome [MONDO:MONDO:0023644,MedGen:C0220641|MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162] | |
205_TYR | CYS | VAR_005953 |
rs1057520007
|
US | - | Sporadic cancers | |
205_TYR | ASP | VAR_005954 |
rs1057520008
|
US | - | Sporadic cancers | |
205_TYR | HIS | VAR_045046 |
rs1057520008
|
US | - | Sporadic cancers | |
205_TYR | ASN | VAR_045047 |
rs1057520008
|
US | - | Sporadic cancers | |
205_TYR | SER | VAR_045048 |
rs1057520007
|
US | - | Sporadic cancers | |
205_TYR | PHE | VAR_047175 |
rs1057520007
|
US | - | Sporadic cancers | |
205_TYR | TER |
ClinVar chr17:7578234 |
rs786202222
|
Pathogenic | - | Hereditary cancer-predisposing syndrome [MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162] | |
205_TYR | CYS |
ClinVar chr17:7578235 |
rs1057520007
|
Pathogenic | - | Hepatocellular carcinoma|Papillary renal cell carcinoma type 1|Squamous cell carcinoma of the head and neck|Ovarian serous cystadenocarcinoma|Non-Hodgkin lymphoma|Uterine carcinosarcoma|Glioblastoma|Breast neoplasm|Malignant neoplasm of body of uterus|Squamous cell lung carcinoma|Multiple myeloma|Lung adenocarcinoma|Pancreatic adenocarcinoma|Carcinoma of esophagus|Neoplasm of brain|Neoplasm of the large intestine|Li-Fraumeni syndrome|Hereditary cancer-predisposing syndrome [Human Phenotype Ontology:HP:0001402,Human Phenotype Ontology:HP:0002899,Human Phenotype Ontology:HP:0003007,Human Phenotype Ontology:HP:0006750,MONDO:MONDO:0007256,MedGen:C2239176,OMIM:114550,Orphanet:88673|Human Phenotype Ontology:HP:0011797,MedGen:C1336839,OMIM:605074,Orphanet:47044|MONDO:MONDO:0010150,MeSH:D000077195,MedGen:C1168401,OMIM:275355,Orphanet:67037|MONDO:MONDO:0006046,MedGen:C0279663|Human Phenotype Ontology:HP:0012539,MONDO:MONDO:0018908,MedGen:C0024305,Orphanet:547|MONDO:MONDO:0006485,MedGen:C0280630|MONDO:MONDO:0018177,MeSH:D005909,MedGen:C0017636,Orphanet:360|Human Phenotype Ontology:HP:0010623,Human Phenotype Ontology:HP:0100013,MONDO:MONDO:0021100,MeSH:D001943,MedGen:C1458155|MedGen:C0153574|Human Phenotype Ontology:HP:0030359,MONDO:MONDO:0005097,MedGen:C0149782|Human Phenotype Ontology:HP:0006775,MONDO:MONDO:0009693,MeSH:D009101,MedGen:C0026764,OMIM:254500,Orphanet:29073,Orphanet:85443|Human Phenotype Ontology:HP:0030078,MONDO:MONDO:0005061,MeSH:D000077192,MedGen:C0152013|Human Phenotype Ontology:HP:0006725,MONDO:MONDO:0006047,MedGen:C0281361|Human Phenotype Ontology:HP:0011459,MONDO:MONDO:0019086,MedGen:C0152018,Orphanet:70482|Human Phenotype Ontology:HP:0030692,MONDO:MONDO:0021211,MeSH:D001932,MedGen:C0006118|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524|MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162] | |
205_TYR | PHE |
ClinVar chr17:7578235 |
rs1057520007
|
Likely pathogenic | - | Non-Hodgkin lymphoma|Papillary renal cell carcinoma type 1|Malignant neoplasm of body of uterus|Lung adenocarcinoma|Breast neoplasm|Ovarian serous cystadenocarcinoma|Pancreatic adenocarcinoma|Neoplasm of brain|Squamous cell lung carcinoma|Glioblastoma|Squamous cell carcinoma of the head and neck|Carcinoma of esophagus|Multiple myeloma|Hepatocellular carcinoma|Uterine carcinosarcoma|Neoplasm of the large intestine [Human Phenotype Ontology:HP:0012539,MONDO:MONDO:0018908,MedGen:C0024305,Orphanet:547|Human Phenotype Ontology:HP:0011797,MedGen:C1336839,OMIM:605074,Orphanet:47044|MedGen:C0153574|Human Phenotype Ontology:HP:0030078,MONDO:MONDO:0005061,MeSH:D000077192,MedGen:C0152013|Human Phenotype Ontology:HP:0010623,Human Phenotype Ontology:HP:0100013,MONDO:MONDO:0021100,MeSH:D001943,MedGen:C1458155|MONDO:MONDO:0006046,MedGen:C0279663|Human Phenotype Ontology:HP:0006725,MONDO:MONDO:0006047,MedGen:C0281361|Human Phenotype Ontology:HP:0030692,MONDO:MONDO:0021211,MeSH:D001932,MedGen:C0006118|Human Phenotype Ontology:HP:0030359,MONDO:MONDO:0005097,MedGen:C0149782|MONDO:MONDO:0018177,MeSH:D005909,MedGen:C0017636,Orphanet:360|MONDO:MONDO:0010150,MeSH:D000077195,MedGen:C1168401,OMIM:275355,Orphanet:67037|Human Phenotype Ontology:HP:0011459,MONDO:MONDO:0019086,MedGen:C0152018,Orphanet:70482|Human Phenotype Ontology:HP:0006775,MONDO:MONDO:0009693,MeSH:D009101,MedGen:C0026764,OMIM:254500,Orphanet:29073,Orphanet:85443|Human Phenotype Ontology:HP:0001402,Human Phenotype Ontology:HP:0002899,Human Phenotype Ontology:HP:0003007,Human Phenotype Ontology:HP:0006750,MONDO:MONDO:0007256,MedGen:C2239176,OMIM:114550,Orphanet:88673|MONDO:MONDO:0006485,MedGen:C0280630|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404] | |
205_TYR | SER |
ClinVar chr17:7578235 |
rs1057520007
|
Likely pathogenic | - | Glioblastoma|Squamous cell carcinoma of the head and neck|Papillary renal cell carcinoma type 1|Malignant neoplasm of body of uterus|Carcinoma of esophagus|Breast neoplasm|Lung adenocarcinoma|Ovarian serous cystadenocarcinoma|Non-Hodgkin lymphoma|Multiple myeloma|Neoplasm of brain|Squamous cell lung carcinoma|Hepatocellular carcinoma|Uterine carcinosarcoma|Pancreatic adenocarcinoma|Neoplasm of the large intestine [MONDO:MONDO:0018177,MeSH:D005909,MedGen:C0017636,Orphanet:360|MONDO:MONDO:0010150,MeSH:D000077195,MedGen:C1168401,OMIM:275355,Orphanet:67037|Human Phenotype Ontology:HP:0011797,MedGen:C1336839,OMIM:605074,Orphanet:47044|MedGen:C0153574|Human Phenotype Ontology:HP:0011459,MONDO:MONDO:0019086,MedGen:C0152018,Orphanet:70482|Human Phenotype Ontology:HP:0010623,Human Phenotype Ontology:HP:0100013,MONDO:MONDO:0021100,MeSH:D001943,MedGen:C1458155|Human Phenotype Ontology:HP:0030078,MONDO:MONDO:0005061,MeSH:D000077192,MedGen:C0152013|MONDO:MONDO:0006046,MedGen:C0279663|Human Phenotype Ontology:HP:0012539,MONDO:MONDO:0018908,MedGen:C0024305,Orphanet:547|Human Phenotype Ontology:HP:0006775,MONDO:MONDO:0009693,MeSH:D009101,MedGen:C0026764,OMIM:254500,Orphanet:29073,Orphanet:85443|Human Phenotype Ontology:HP:0030692,MONDO:MONDO:0021211,MeSH:D001932,MedGen:C0006118|Human Phenotype Ontology:HP:0030359,MONDO:MONDO:0005097,MedGen:C0149782|Human Phenotype Ontology:HP:0001402,Human Phenotype Ontology:HP:0002899,Human Phenotype Ontology:HP:0003007,Human Phenotype Ontology:HP:0006750,MONDO:MONDO:0007256,MedGen:C2239176,OMIM:114550,Orphanet:88673|MONDO:MONDO:0006485,MedGen:C0280630|Human Phenotype Ontology:HP:0006725,MONDO:MONDO:0006047,MedGen:C0281361|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404] | |
205_TYR | HIS |
ClinVar chr17:7578236 |
rs1057520008
|
Pathogenic/Likely pathogenic | - | Pancreatic adenocarcinoma|Multiple myeloma|Neoplasm of brain|Carcinoma of esophagus|Glioblastoma|Lung adenocarcinoma|Non-Hodgkin lymphoma|Uterine carcinosarcoma|Hepatocellular carcinoma|Papillary renal cell carcinoma type 1|Malignant neoplasm of body of uterus|Ovarian serous cystadenocarcinoma|Breast neoplasm|Neoplasm of the large intestine|Squamous cell lung carcinoma|Squamous cell carcinoma of the head and neck|Hereditary cancer-predisposing syndrome|Li-Fraumeni syndrome [Human Phenotype Ontology:HP:0006725,MONDO:MONDO:0006047,MedGen:C0281361|Human Phenotype Ontology:HP:0006775,MONDO:MONDO:0009693,MeSH:D009101,MedGen:C0026764,OMIM:254500,Orphanet:29073,Orphanet:85443|Human Phenotype Ontology:HP:0030692,MONDO:MONDO:0021211,MeSH:D001932,MedGen:C0006118|Human Phenotype Ontology:HP:0011459,MONDO:MONDO:0019086,MedGen:C0152018,Orphanet:70482|MONDO:MONDO:0018177,MeSH:D005909,MedGen:C0017636,Orphanet:360|Human Phenotype Ontology:HP:0030078,MONDO:MONDO:0005061,MeSH:D000077192,MedGen:C0152013|Human Phenotype Ontology:HP:0012539,MONDO:MONDO:0018908,MedGen:C0024305,Orphanet:547|MONDO:MONDO:0006485,MedGen:C0280630|Human Phenotype Ontology:HP:0001402,Human Phenotype Ontology:HP:0002899,Human Phenotype Ontology:HP:0003007,Human Phenotype Ontology:HP:0006750,MONDO:MONDO:0007256,MedGen:C2239176,OMIM:114550,Orphanet:88673|Human Phenotype Ontology:HP:0011797,MedGen:C1336839,OMIM:605074,Orphanet:47044|MedGen:C0153574|MONDO:MONDO:0006046,MedGen:C0279663|Human Phenotype Ontology:HP:0010623,Human Phenotype Ontology:HP:0100013,MONDO:MONDO:0021100,MeSH:D001943,MedGen:C1458155|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|Human Phenotype Ontology:HP:0030359,MONDO:MONDO:0005097,MedGen:C0149782|MONDO:MONDO:0010150,MeSH:D000077195,MedGen:C1168401,OMIM:275355,Orphanet:67037|MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162|MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524] | |
205_TYR | TER |
ClinVar chr17:7578234 |
rs786202222
|
Pathogenic | - | Li-Fraumeni syndrome [MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524] | |
206_LEU | PHE | VAR_045049 |
-
|
US | - | A sporadic cancer | |
206_LEU | MET | VAR_045050 |
-
|
US | - | A sporadic cancer | |
207_ASP | GLU | VAR_045051 |
-
|
US | - | Sporadic cancers | |
207_ASP | GLY | VAR_045052 |
-
|
US | - | Sporadic cancers | |
207_ASP | HIS | VAR_045053 |
-
|
US | - | Sporadic cancers | |
207_ASP | ASN | VAR_045054 |
rs923100890
|
US | - | Sporadic cancers | |
207_ASP | VAL | VAR_045055 |
-
|
US | - | A sporadic cancer | |
207_ASP | TYR | VAR_045056 |
-
|
US | - | A sporadic cancer | |
208_ASP | GLU | VAR_045057 |
-
|
US | - | Sporadic cancers | |
208_ASP | GLY | VAR_045058 |
-
|
US | - | Sporadic cancers | |
208_ASP | HIS | VAR_045059 |
-
|
US | - | A sporadic cancer | |
208_ASP | ASN | VAR_045060 |
-
|
US | - | Sporadic cancers | |
208_ASP | VAL | VAR_045061 |
rs1464727668
|
US | - | Sporadic cancers | |
208_ASP | TYR | VAR_045062 |
-
|
US | - | A sporadic cancer | |
208_ASP | ILE | VAR_045809 |
-
|
US | - | A sporadic cancer | |
209_ARG | ILE | VAR_045063 |
-
|
US | - | Sporadic cancers | |
209_ARG | LYS | VAR_045064 |
-
|
US | - | Sporadic cancers | |
209_ARG | SER | VAR_045065 |
-
|
US | - | A sporadic cancer | |
209_ARG | THR | VAR_045066 |
-
|
US | - | Sporadic cancers | |
210_ASN | ASP | VAR_045067 |
-
|
US | - | Sporadic cancers | |
210_ASN | HIS | VAR_045068 |
-
|
US | - | Sporadic cancers | |
210_ASN | ILE | VAR_045069 |
-
|
US | - | A sporadic cancer | |
210_ASN | LYS | VAR_045070 |
-
|
US | - | A sporadic cancer | |
210_ASN | SER | VAR_045071 |
-
|
US | - | Sporadic cancers | |
210_ASN | THR | VAR_045072 |
-
|
US | - | A sporadic cancer | |
210_ASN | TYR | VAR_045073 |
rs1060501200
|
US | - | A familial cancer not matching LFS | |
211_THR | ALA | VAR_045074 |
rs1060501198
|
US | - | Sporadic cancers | |
211_THR | ILE | VAR_045075 |
-
|
US | - | Sporadic cancers | |
211_THR | ASN | VAR_045076 |
-
|
US | - | Sporadic cancers | |
211_THR | PRO | VAR_045077 |
-
|
US | - | A sporadic cancer | |
211_THR | SER | VAR_045078 |
-
|
US | - | Sporadic cancers | |
212_PHE | ILE | VAR_045079 |
rs1064795766
|
US | - | Sporadic cancers | |
212_PHE | LEU | VAR_045080 |
-
|
US | - | Sporadic cancers | |
212_PHE | SER | VAR_045081 |
-
|
US | - | Sporadic cancers | |
212_PHE | VAL | VAR_045082 |
-
|
US | - | A sporadic cancer | |
212_PHE | TYR | VAR_045083 |
-
|
US | - | Sporadic cancers | |
213_ARG | GLN | VAR_005955 |
rs587778720
|
LP/P | - | Li-Fraumeni syndrome (LFS) [MIM:151623] | |
213_ARG | PRO | VAR_036506 |
rs587778720
|
LP/P | - | Li-Fraumeni syndrome (LFS) [MIM:151623] | |
213_ARG | GLY | VAR_045084 |
rs397516436
|
US | - | Sporadic cancers | |
213_ARG | LEU | VAR_045085 |
rs587778720
|
US | - | Sporadic cancers | |
213_ARG | TRP | VAR_045086 |
-
|
US | - | Sporadic cancers | |
213_ARG | TER |
ClinVar chr17:7578212 |
rs397516436
|
Pathogenic | - | Li-Fraumeni syndrome|Hereditary cancer-predisposing syndrome|Li-Fraumeni syndrome 1|not provided|Neoplasm of ovary|Squamous cell carcinoma of the head and neck|Familial cancer of breast|Colorectal cancer [MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524|MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162|Gene:553989,MedGen:C1835398,OMIM:151623,Orphanet:524|MedGen:C3661900|Human Phenotype Ontology:HP:0100615,MONDO:MONDO:0021068,MeSH:D010051,MedGen:C0919267,OMIM:167000|MONDO:MONDO:0010150,MeSH:D000077195,MedGen:C1168401,OMIM:275355,Orphanet:67037|MONDO:MONDO:0016419,MedGen:C0346153,OMIM:114480,Orphanet:227535|MONDO:MONDO:0005575,MedGen:C0346629,OMIM:114500] | |
213_ARG | GLN |
ClinVar chr17:7578211 |
rs587778720
|
Pathogenic | - | not specified|Li-Fraumeni syndrome|Li-Fraumeni syndrome 1|Hereditary cancer-predisposing syndrome|Squamous cell carcinoma of the skin|Glioblastoma|Carcinoma of esophagus|Neoplasm of the large intestine|Adrenal cortex carcinoma|Papillary renal cell carcinoma type 1|Ovarian serous cystadenocarcinoma|Gastric adenocarcinoma|Neoplasm of brain|Pancreatic adenocarcinoma|not provided|Squamous cell carcinoma of the head and neck|Hepatocellular carcinoma|Malignant melanoma of skin|Uterine carcinosarcoma|Prostate adenocarcinoma|Lung adenocarcinoma|Nasopharyngeal neoplasm|Transitional cell carcinoma of the bladder|Breast neoplasm|Squamous cell lung carcinoma|Malignant neoplasm of body of uterus|Adenoid cystic carcinoma|Poly (ADP-Ribose) polymerase inhibitor response|Lip and oral cavity carcinoma|Breast and/or ovarian cancer|Adrenocortical carcinoma, hereditary [MedGen:CN169374|MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524|Gene:553989,MedGen:C1835398,OMIM:151623,Orphanet:524|MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162|Human Phenotype Ontology:HP:0006739,Human Phenotype Ontology:HP:0007614,MONDO:MONDO:0002529,MedGen:C0553723|MONDO:MONDO:0018177,MeSH:D005909,MedGen:C0017636,Orphanet:360|Human Phenotype Ontology:HP:0011459,MONDO:MONDO:0019086,MedGen:C0152018,Orphanet:70482|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|Human Phenotype Ontology:HP:0002889,Human Phenotype Ontology:HP:0006744,Human Phenotype Ontology:HP:0006759,MONDO:MONDO:0006639,MeSH:D018268,MedGen:C0206686,Orphanet:1501|Human Phenotype Ontology:HP:0011797,MedGen:C1336839,OMIM:605074,Orphanet:47044|MONDO:MONDO:0006046,MedGen:C0279663|Human Phenotype Ontology:HP:0033770,MONDO:MONDO:0005036,MedGen:C0278701|Human Phenotype Ontology:HP:0030692,MONDO:MONDO:0021211,MeSH:D001932,MedGen:C0006118|Human Phenotype Ontology:HP:0006725,MONDO:MONDO:0006047,MedGen:C0281361|MedGen:C3661900|MONDO:MONDO:0010150,MeSH:D000077195,MedGen:C1168401,OMIM:275355,Orphanet:67037|Human Phenotype Ontology:HP:0001402,Human Phenotype Ontology:HP:0002899,Human Phenotype Ontology:HP:0003007,Human Phenotype Ontology:HP:0006750,MONDO:MONDO:0007256,MedGen:C2239176,OMIM:114550,Orphanet:88673|Human Phenotype Ontology:HP:0012056,MONDO:MONDO:0005012,MeSH:C562393,MedGen:C0151779|MONDO:MONDO:0006485,MedGen:C0280630|MONDO:MONDO:0005082,MedGen:C0007112|Human Phenotype Ontology:HP:0030078,MONDO:MONDO:0005061,MeSH:D000077192,MedGen:C0152013|Human Phenotype Ontology:HP:0100630,MONDO:MONDO:0005375,MeSH:D009303,MedGen:C0027439|Human Phenotype Ontology:HP:0006740,MONDO:MONDO:0005611,MedGen:C0279680|Human Phenotype Ontology:HP:0010623,Human Phenotype Ontology:HP:0100013,MONDO:MONDO:0021100,MeSH:D001943,MedGen:C1458155|Human Phenotype Ontology:HP:0030359,MONDO:MONDO:0005097,MedGen:C0149782|MedGen:C0153574|MONDO:MONDO:0004971,MeSH:D003528,MedGen:C0010606|MedGen:CN322715|MONDO:MONDO:0023644,MedGen:C0220641|MedGen:CN221562|MONDO:MONDO:0008734,MedGen:C1859972,OMIM:202300,Orphanet:1501] | |
213_ARG | PRO |
ClinVar chr17:7578211 |
rs587778720
|
Pathogenic/Likely pathogenic | - | Hereditary cancer-predisposing syndrome|Malignant melanoma of skin|Adrenal cortex carcinoma|Nasopharyngeal neoplasm|Neoplasm of the large intestine|Squamous cell carcinoma of the skin|Ovarian serous cystadenocarcinoma|Breast neoplasm|Prostate adenocarcinoma|Squamous cell lung carcinoma|Lung adenocarcinoma|Squamous cell carcinoma of the head and neck|Neoplasm of brain|Hepatocellular carcinoma|Adenoid cystic carcinoma|Papillary renal cell carcinoma type 1|Uterine carcinosarcoma|Transitional cell carcinoma of the bladder|Gastric adenocarcinoma|Glioblastoma|Pancreatic adenocarcinoma|Carcinoma of esophagus|Malignant neoplasm of body of uterus|not specified|Li-Fraumeni syndrome 1|Li-Fraumeni syndrome [MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162|Human Phenotype Ontology:HP:0012056,MONDO:MONDO:0005012,MeSH:C562393,MedGen:C0151779|Human Phenotype Ontology:HP:0002889,Human Phenotype Ontology:HP:0006744,Human Phenotype Ontology:HP:0006759,MONDO:MONDO:0006639,MeSH:D018268,MedGen:C0206686,Orphanet:1501|Human Phenotype Ontology:HP:0100630,MONDO:MONDO:0005375,MeSH:D009303,MedGen:C0027439|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|Human Phenotype Ontology:HP:0006739,Human Phenotype Ontology:HP:0007614,MONDO:MONDO:0002529,MedGen:C0553723|MONDO:MONDO:0006046,MedGen:C0279663|Human Phenotype Ontology:HP:0010623,Human Phenotype Ontology:HP:0100013,MONDO:MONDO:0021100,MeSH:D001943,MedGen:C1458155|MONDO:MONDO:0005082,MedGen:C0007112|Human Phenotype Ontology:HP:0030359,MONDO:MONDO:0005097,MedGen:C0149782|Human Phenotype Ontology:HP:0030078,MONDO:MONDO:0005061,MeSH:D000077192,MedGen:C0152013|MONDO:MONDO:0010150,MeSH:D000077195,MedGen:C1168401,OMIM:275355,Orphanet:67037|Human Phenotype Ontology:HP:0030692,MONDO:MONDO:0021211,MeSH:D001932,MedGen:C0006118|Human Phenotype Ontology:HP:0001402,Human Phenotype Ontology:HP:0002899,Human Phenotype Ontology:HP:0003007,Human Phenotype Ontology:HP:0006750,MONDO:MONDO:0007256,MedGen:C2239176,OMIM:114550,Orphanet:88673|MONDO:MONDO:0004971,MeSH:D003528,MedGen:C0010606|Human Phenotype Ontology:HP:0011797,MedGen:C1336839,OMIM:605074,Orphanet:47044|MONDO:MONDO:0006485,MedGen:C0280630|Human Phenotype Ontology:HP:0006740,MONDO:MONDO:0005611,MedGen:C0279680|Human Phenotype Ontology:HP:0033770,MONDO:MONDO:0005036,MedGen:C0278701|MONDO:MONDO:0018177,MeSH:D005909,MedGen:C0017636,Orphanet:360|Human Phenotype Ontology:HP:0006725,MONDO:MONDO:0006047,MedGen:C0281361|Human Phenotype Ontology:HP:0011459,MONDO:MONDO:0019086,MedGen:C0152018,Orphanet:70482|MedGen:C0153574|MedGen:CN169374|Gene:553989,MedGen:C1835398,OMIM:151623,Orphanet:524|MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524] | |
214_HIS | ASP | VAR_045087 |
-
|
US | - | Sporadic cancers | |
214_HIS | PRO | VAR_045088 |
rs1057519992
|
US | - | A sporadic cancer | |
214_HIS | ARG | VAR_045089 |
rs1057519992
|
US | - | Sporadic cancers | |
214_HIS | TYR | VAR_045090 |
-
|
US | - | Sporadic cancers | |
214_HIS | GLN | VAR_047177 |
rs587781386
|
US | - | Sporadic cancers | |
214_HIS | ARG |
ClinVar chr17:7578208 |
rs1057519992
|
Likely pathogenic | - | Papillary renal cell carcinoma type 1|Squamous cell lung carcinoma|Carcinoma of esophagus|Hepatocellular carcinoma|Ovarian serous cystadenocarcinoma|Gastric adenocarcinoma|Pancreatic adenocarcinoma|Transitional cell carcinoma of the bladder|Neoplasm of the large intestine|B-cell chronic lymphocytic leukemia|Glioblastoma|Li-Fraumeni syndrome|Hereditary cancer-predisposing syndrome|not provided [Human Phenotype Ontology:HP:0011797,MedGen:C1336839,OMIM:605074,Orphanet:47044|Human Phenotype Ontology:HP:0030359,MONDO:MONDO:0005097,MedGen:C0149782|Human Phenotype Ontology:HP:0011459,MONDO:MONDO:0019086,MedGen:C0152018,Orphanet:70482|Human Phenotype Ontology:HP:0001402,Human Phenotype Ontology:HP:0002899,Human Phenotype Ontology:HP:0003007,Human Phenotype Ontology:HP:0006750,MONDO:MONDO:0007256,MedGen:C2239176,OMIM:114550,Orphanet:88673|MONDO:MONDO:0006046,MedGen:C0279663|Human Phenotype Ontology:HP:0033770,MONDO:MONDO:0005036,MedGen:C0278701|Human Phenotype Ontology:HP:0006725,MONDO:MONDO:0006047,MedGen:C0281361|Human Phenotype Ontology:HP:0006740,MONDO:MONDO:0005611,MedGen:C0279680|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|Human Phenotype Ontology:HP:0005550,Human Phenotype Ontology:HP:0006734,Human Phenotype Ontology:HP:0006760,MONDO:MONDO:0004948,MeSH:D015451,MedGen:C0023434,OMIM:151400,Orphanet:67038|MONDO:MONDO:0018177,MeSH:D005909,MedGen:C0017636,Orphanet:360|MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524|MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162|MedGen:C3661900] | |
215_SER | CYS | VAR_045091 |
-
|
US | - | Sporadic cancers | |
215_SER | GLY | VAR_045092 |
rs886039484
|
US | - | Sporadic cancers | |
215_SER | ILE | VAR_045093 |
rs587782177
|
US | - | Sporadic cancers | |
215_SER | ASN | VAR_045094 |
rs587782177
|
US | - | Sporadic cancers | |
215_SER | ARG | VAR_045095 |
rs1057520001
|
US | - | Sporadic cancers | |
215_SER | THR | VAR_045096 |
rs587782177
|
US | - | Sporadic cancers | |
215_SER | LYS | VAR_045810 |
-
|
US | - | Sporadic cancers | |
216_VAL | MET | VAR_005956 |
rs730882025
|
US | - | Sporadic cancers | |
216_VAL | ALA | VAR_045097 |
-
|
US | - | Sporadic cancers | |
216_VAL | GLU | VAR_045098 |
rs1057520004
|
US | - | Sporadic cancers | |
216_VAL | GLY | VAR_045099 |
rs1057520004
|
US | - | Sporadic cancers | |
216_VAL | LEU | VAR_045100 |
rs730882025
|
US | - | Sporadic cancers | |
216_VAL | TRP | VAR_045811 |
-
|
US | - | A sporadic cancer | |
216_VAL | MET |
ClinVar chr17:7578203 |
rs730882025
|
Pathogenic/Likely pathogenic | - | not provided|Li-Fraumeni syndrome|Breast neoplasm|Ovarian serous cystadenocarcinoma|Pancreatic adenocarcinoma|Carcinoma of esophagus|Neoplasm of brain|Squamous cell lung carcinoma|Lung adenocarcinoma|Glioblastoma|Squamous cell carcinoma of the head and neck|Squamous cell carcinoma of the skin|not specified|Uterine carcinosarcoma|Li-Fraumeni syndrome 1|Hereditary cancer-predisposing syndrome|Neoplasm of ovary|Adrenocortical carcinoma, hereditary [MedGen:C3661900|MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524|Human Phenotype Ontology:HP:0010623,Human Phenotype Ontology:HP:0100013,MONDO:MONDO:0021100,MeSH:D001943,MedGen:C1458155|MONDO:MONDO:0006046,MedGen:C0279663|Human Phenotype Ontology:HP:0006725,MONDO:MONDO:0006047,MedGen:C0281361|Human Phenotype Ontology:HP:0011459,MONDO:MONDO:0019086,MedGen:C0152018,Orphanet:70482|Human Phenotype Ontology:HP:0030692,MONDO:MONDO:0021211,MeSH:D001932,MedGen:C0006118|Human Phenotype Ontology:HP:0030359,MONDO:MONDO:0005097,MedGen:C0149782|Human Phenotype Ontology:HP:0030078,MONDO:MONDO:0005061,MeSH:D000077192,MedGen:C0152013|MONDO:MONDO:0018177,MeSH:D005909,MedGen:C0017636,Orphanet:360|MONDO:MONDO:0010150,MeSH:D000077195,MedGen:C1168401,OMIM:275355,Orphanet:67037|Human Phenotype Ontology:HP:0006739,Human Phenotype Ontology:HP:0007614,MONDO:MONDO:0002529,MedGen:C0553723|MedGen:CN169374|MONDO:MONDO:0006485,MedGen:C0280630|Gene:553989,MedGen:C1835398,OMIM:151623,Orphanet:524|MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162|Human Phenotype Ontology:HP:0100615,MONDO:MONDO:0021068,MeSH:D010051,MedGen:C0919267,OMIM:167000|MONDO:MONDO:0008734,MedGen:C1859972,OMIM:202300,Orphanet:1501] | |
217_VAL | ALA | VAR_045101 |
-
|
US | - | Sporadic cancers | |
217_VAL | GLU | VAR_045102 |
-
|
US | - | Sporadic cancers | |
217_VAL | GLY | VAR_045103 |
-
|
US | - | Sporadic cancers | |
217_VAL | ILE | VAR_045104 |
-
|
US | - | A sporadic cancer | |
217_VAL | LEU | VAR_045105 |
-
|
US | - | Sporadic cancers | |
217_VAL | MET | VAR_047178 |
rs35163653
|
LB/B | - | - | |
218_VAL | ALA | VAR_045106 |
-
|
US | - | Sporadic cancers | |
218_VAL | GLU | VAR_045107 |
-
|
US | - | Sporadic cancers | |
218_VAL | GLY | VAR_045108 |
rs1555525743
|
US | - | Sporadic cancers | |
218_VAL | LEU | VAR_045109 |
-
|
US | - | Sporadic cancers | |
218_VAL | MET | VAR_045110 |
rs878854072
|
US | - | Sporadic cancers | |
218_VAL | GLU |
ClinVar chr17:7578196 |
-
|
Likely pathogenic | - | Hereditary cancer-predisposing syndrome [MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162] | |
219_PRO | HIS | VAR_045111 |
-
|
US | - | A sporadic cancer | |
219_PRO | LEU | VAR_045112 |
rs1420675064
|
US | - | Sporadic cancers | |
219_PRO | ARG | VAR_045113 |
-
|
US | - | A sporadic cancer | |
219_PRO | SER | VAR_045114 |
rs879253894
|
US | - | A familial cancer not matching LFS | |
219_PRO | THR | VAR_045115 |
-
|
US | - | Sporadic cancers | |
219_PRO | CYS | VAR_045812 |
-
|
US | - | A sporadic cancer | |
220_TYR | CYS | VAR_005957 |
rs121912666
|
LP/P | - | Li-Fraumeni syndrome (LFS) [MIM:151623] | |
220_TYR | HIS | VAR_005958 |
rs530941076
|
US | - | Sporadic cancers | |
220_TYR | SER | VAR_005959 |
rs121912666
|
US | - | A brain tumor with no family history | |
220_TYR | ASP | VAR_045116 |
rs530941076
|
US | - | Sporadic cancers | |
220_TYR | PHE | VAR_045117 |
-
|
US | - | A sporadic cancer | |
220_TYR | ASN | VAR_045118 |
rs530941076
|
US | - | Sporadic cancers | |
220_TYR | SER |
ClinVar chr17:7578190 |
rs121912666
|
Pathogenic | - | Li-Fraumeni syndrome 1|Papillary renal cell carcinoma type 1|Ovarian serous cystadenocarcinoma|Breast neoplasm|Malignant neoplasm of body of uterus|Hepatocellular carcinoma|Pancreatic adenocarcinoma|Squamous cell lung carcinoma|Neoplasm of the large intestine|Lung adenocarcinoma|Malignant melanoma of skin|Squamous cell carcinoma of the head and neck|Prostate adenocarcinoma|Transitional cell carcinoma of the bladder|Small cell lung carcinoma|Uterine carcinosarcoma|Papillary renal cell carcinoma, sporadic|Glioblastoma|Gastric adenocarcinoma|Li-Fraumeni syndrome|Neoplasm of brain|Neoplasm of ovary|Hereditary cancer-predisposing syndrome [Gene:553989,MedGen:C1835398,OMIM:151623,Orphanet:524|Human Phenotype Ontology:HP:0011797,MedGen:C1336839,OMIM:605074,Orphanet:47044|MONDO:MONDO:0006046,MedGen:C0279663|Human Phenotype Ontology:HP:0010623,Human Phenotype Ontology:HP:0100013,MONDO:MONDO:0021100,MeSH:D001943,MedGen:C1458155|MedGen:C0153574|Human Phenotype Ontology:HP:0001402,Human Phenotype Ontology:HP:0002899,Human Phenotype Ontology:HP:0003007,Human Phenotype Ontology:HP:0006750,MONDO:MONDO:0007256,MedGen:C2239176,OMIM:114550,Orphanet:88673|Human Phenotype Ontology:HP:0006725,MONDO:MONDO:0006047,MedGen:C0281361|Human Phenotype Ontology:HP:0030359,MONDO:MONDO:0005097,MedGen:C0149782|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|Human Phenotype Ontology:HP:0030078,MONDO:MONDO:0005061,MeSH:D000077192,MedGen:C0152013|Human Phenotype Ontology:HP:0012056,MONDO:MONDO:0005012,MeSH:C562393,MedGen:C0151779|MONDO:MONDO:0010150,MeSH:D000077195,MedGen:C1168401,OMIM:275355,Orphanet:67037|MONDO:MONDO:0005082,MedGen:C0007112|Human Phenotype Ontology:HP:0006740,MONDO:MONDO:0005611,MedGen:C0279680|Human Phenotype Ontology:HP:0030357,MONDO:MONDO:0008433,MeSH:D055752,MedGen:C0149925,OMIM:182280,Orphanet:70573|MONDO:MONDO:0006485,MedGen:C0280630|MeSH:C538614,MedGen:C1336078|MONDO:MONDO:0018177,MeSH:D005909,MedGen:C0017636,Orphanet:360|Human Phenotype Ontology:HP:0033770,MONDO:MONDO:0005036,MedGen:C0278701|MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524|Human Phenotype Ontology:HP:0030692,MONDO:MONDO:0021211,MeSH:D001932,MedGen:C0006118|Human Phenotype Ontology:HP:0100615,MONDO:MONDO:0021068,MeSH:D010051,MedGen:C0919267,OMIM:167000|MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162] | |
220_TYR | CYS |
ClinVar chr17:7578190 |
rs121912666
|
Pathogenic | - | Hereditary cancer-predisposing syndrome|not provided|Li-Fraumeni syndrome|Squamous cell lung carcinoma|Hepatocellular carcinoma|Pancreatic adenocarcinoma|Lung adenocarcinoma|Transitional cell carcinoma of the bladder|Prostate adenocarcinoma|Uterine carcinosarcoma|Acute myeloid leukemia|Ovarian serous cystadenocarcinoma|Papillary renal cell carcinoma type 1|Malignant neoplasm of body of uterus|Breast neoplasm|Malignant melanoma of skin|Squamous cell carcinoma of the head and neck|Gastric adenocarcinoma|Neoplasm of brain|Small cell lung carcinoma|Glioblastoma|Papillary renal cell carcinoma, sporadic|Neoplasm of the large intestine|Neoplasm of ovary|Li-Fraumeni syndrome 1|Breast carcinoma|B-cell chronic lymphocytic leukemia|Gastric cancer|12 conditions|TP53-related condition|Adrenocortical carcinoma, hereditary [MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162|MedGen:C3661900|MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524|Human Phenotype Ontology:HP:0030359,MONDO:MONDO:0005097,MedGen:C0149782|Human Phenotype Ontology:HP:0001402,Human Phenotype Ontology:HP:0002899,Human Phenotype Ontology:HP:0003007,Human Phenotype Ontology:HP:0006750,MONDO:MONDO:0007256,MedGen:C2239176,OMIM:114550,Orphanet:88673|Human Phenotype Ontology:HP:0006725,MONDO:MONDO:0006047,MedGen:C0281361|Human Phenotype Ontology:HP:0030078,MONDO:MONDO:0005061,MeSH:D000077192,MedGen:C0152013|Human Phenotype Ontology:HP:0006740,MONDO:MONDO:0005611,MedGen:C0279680|MONDO:MONDO:0005082,MedGen:C0007112|MONDO:MONDO:0006485,MedGen:C0280630|Human Phenotype Ontology:HP:0001914,Human Phenotype Ontology:HP:0004808,Human Phenotype Ontology:HP:0004843,Human Phenotype Ontology:HP:0005516,Human Phenotype Ontology:HP:0006724,Human Phenotype Ontology:HP:0006728,MONDO:MONDO:0018874,MeSH:D015470,MedGen:C0023467,OMIM:601626,Orphanet:519|MONDO:MONDO:0006046,MedGen:C0279663|Human Phenotype Ontology:HP:0011797,MedGen:C1336839,OMIM:605074,Orphanet:47044|MedGen:C0153574|Human Phenotype Ontology:HP:0010623,Human Phenotype Ontology:HP:0100013,MONDO:MONDO:0021100,MeSH:D001943,MedGen:C1458155|Human Phenotype Ontology:HP:0012056,MONDO:MONDO:0005012,MeSH:C562393,MedGen:C0151779|MONDO:MONDO:0010150,MeSH:D000077195,MedGen:C1168401,OMIM:275355,Orphanet:67037|Human Phenotype Ontology:HP:0033770,MONDO:MONDO:0005036,MedGen:C0278701|Human Phenotype Ontology:HP:0030692,MONDO:MONDO:0021211,MeSH:D001932,MedGen:C0006118|Human Phenotype Ontology:HP:0030357,MONDO:MONDO:0008433,MeSH:D055752,MedGen:C0149925,OMIM:182280,Orphanet:70573|MONDO:MONDO:0018177,MeSH:D005909,MedGen:C0017636,Orphanet:360|MeSH:C538614,MedGen:C1336078|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|Human Phenotype Ontology:HP:0100615,MONDO:MONDO:0021068,MeSH:D010051,MedGen:C0919267,OMIM:167000|Gene:553989,MedGen:C1835398,OMIM:151623,Orphanet:524|Human Phenotype Ontology:HP:0003002,MONDO:MONDO:0004989,MedGen:C0678222|Human Phenotype Ontology:HP:0005550,Human Phenotype Ontology:HP:0006734,Human Phenotype Ontology:HP:0006760,MONDO:MONDO:0004948,MeSH:D015451,MedGen:C0023434,OMIM:151400,Orphanet:67038|Human Phenotype Ontology:HP:0012126,MONDO:MONDO:0001056,MeSH:D013274,MedGen:C0024623,OMIM:613659|12 conditions||MONDO:MONDO:0008734,MedGen:C1859972,OMIM:202300,Orphanet:1501] | |
220_TYR | HIS |
ClinVar chr17:7578191 |
rs530941076
|
Pathogenic/Likely pathogenic | - | Breast neoplasm|Glioblastoma|Ovarian serous cystadenocarcinoma|Hepatocellular carcinoma|Prostate adenocarcinoma|Transitional cell carcinoma of the bladder|Malignant melanoma of skin|Neoplasm of brain|Neoplasm of the large intestine|Squamous cell carcinoma of the head and neck|Squamous cell lung carcinoma|Pancreatic adenocarcinoma|Papillary renal cell carcinoma type 1|Gastric adenocarcinoma|Malignant neoplasm of body of uterus|Papillary renal cell carcinoma, sporadic|Small cell lung carcinoma|Hereditary cancer-predisposing syndrome|Lung adenocarcinoma|Uterine carcinosarcoma|Neoplasm of ovary|Li-Fraumeni syndrome|Adrenocortical carcinoma, hereditary [Human Phenotype Ontology:HP:0010623,Human Phenotype Ontology:HP:0100013,MONDO:MONDO:0021100,MeSH:D001943,MedGen:C1458155|MONDO:MONDO:0018177,MeSH:D005909,MedGen:C0017636,Orphanet:360|MONDO:MONDO:0006046,MedGen:C0279663|Human Phenotype Ontology:HP:0001402,Human Phenotype Ontology:HP:0002899,Human Phenotype Ontology:HP:0003007,Human Phenotype Ontology:HP:0006750,MONDO:MONDO:0007256,MedGen:C2239176,OMIM:114550,Orphanet:88673|MONDO:MONDO:0005082,MedGen:C0007112|Human Phenotype Ontology:HP:0006740,MONDO:MONDO:0005611,MedGen:C0279680|Human Phenotype Ontology:HP:0012056,MONDO:MONDO:0005012,MeSH:C562393,MedGen:C0151779|Human Phenotype Ontology:HP:0030692,MONDO:MONDO:0021211,MeSH:D001932,MedGen:C0006118|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|MONDO:MONDO:0010150,MeSH:D000077195,MedGen:C1168401,OMIM:275355,Orphanet:67037|Human Phenotype Ontology:HP:0030359,MONDO:MONDO:0005097,MedGen:C0149782|Human Phenotype Ontology:HP:0006725,MONDO:MONDO:0006047,MedGen:C0281361|Human Phenotype Ontology:HP:0011797,MedGen:C1336839,OMIM:605074,Orphanet:47044|Human Phenotype Ontology:HP:0033770,MONDO:MONDO:0005036,MedGen:C0278701|MedGen:C0153574|MeSH:C538614,MedGen:C1336078|Human Phenotype Ontology:HP:0030357,MONDO:MONDO:0008433,MeSH:D055752,MedGen:C0149925,OMIM:182280,Orphanet:70573|MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162|Human Phenotype Ontology:HP:0030078,MONDO:MONDO:0005061,MeSH:D000077192,MedGen:C0152013|MONDO:MONDO:0006485,MedGen:C0280630|Human Phenotype Ontology:HP:0100615,MONDO:MONDO:0021068,MeSH:D010051,MedGen:C0919267,OMIM:167000|MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524|MONDO:MONDO:0008734,MedGen:C1859972,OMIM:202300,Orphanet:1501] | |
220_TYR | TER |
ClinVar chr17:7578189 |
rs1567551150
|
Pathogenic | - | Neoplasm of ovary [Human Phenotype Ontology:HP:0100615,MONDO:MONDO:0021068,MeSH:D010051,MedGen:C0919267,OMIM:167000] | |
221_GLU | ALA | VAR_045119 |
-
|
US | - | Sporadic cancers | |
221_GLU | ASP | VAR_045120 |
-
|
US | - | Sporadic cancers | |
221_GLU | GLY | VAR_045121 |
-
|
US | - | Sporadic cancers | |
221_GLU | LYS | VAR_045122 |
rs786201592
|
US | - | Sporadic cancers | |
221_GLU | GLN | VAR_045123 |
-
|
US | - | Sporadic cancers | |
221_GLU | TER |
ClinVar chr17:7578188 |
rs786201592
|
Pathogenic | - | Neoplasm of ovary|Li-Fraumeni syndrome [Human Phenotype Ontology:HP:0100615,MONDO:MONDO:0021068,MeSH:D010051,MedGen:C0919267,OMIM:167000|MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524] | |
222_PRO | ALA | VAR_045124 |
-
|
US | - | A sporadic cancer | |
222_PRO | LEU | VAR_045125 |
rs146340390
|
US | - | Sporadic cancers | |
222_PRO | GLN | VAR_045126 |
-
|
US | - | Sporadic cancers | |
222_PRO | ARG | VAR_045127 |
-
|
US | - | A sporadic cancer | |
222_PRO | SER | VAR_045128 |
rs1060501203
|
US | - | Sporadic cancers | |
222_PRO | THR | VAR_045129 |
-
|
US | - | Sporadic cancers | |
223_PRO | HIS | VAR_045130 |
rs138983188
|
US | - | Sporadic cancers | |
223_PRO | LEU | VAR_045131 |
rs138983188
|
US | - | Sporadic cancers | |
223_PRO | ARG | VAR_045132 |
-
|
US | - | A sporadic cancer | |
223_PRO | SER | VAR_045133 |
-
|
US | - | A sporadic cancer | |
223_PRO | THR | VAR_045134 |
-
|
US | - | A sporadic cancer | |
223_PRO | ALA | VAR_047179 |
-
|
US | - | A sporadic cancer | |
224_GLU | ASP | VAR_045135 |
rs267605076
|
US | - | Sporadic cancers | |
224_GLU | GLY | VAR_045136 |
-
|
US | - | Sporadic cancers | |
224_GLU | LYS | VAR_045137 |
rs1555525707
|
US | - | Sporadic cancers | |
224_GLU | VAL | VAR_045138 |
-
|
US | - | A sporadic cancer | |
224_GLU | GLU |
ClinVar chr17:7578177 |
rs267605076
|
Pathogenic/Likely pathogenic | - | Hereditary cancer-predisposing syndrome|not provided|Li-Fraumeni syndrome|Li-Fraumeni syndrome 1 [MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162|MedGen:C3661900|MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524|Gene:553989,MedGen:C1835398,OMIM:151623,Orphanet:524] | |
225_VAL | ALA | VAR_045139 |
-
|
US | - | Sporadic cancers | |
225_VAL | ASP | VAR_045140 |
-
|
US | - | A sporadic cancer | |
225_VAL | PHE | VAR_045141 |
-
|
US | - | Sporadic cancers | |
225_VAL | GLY | VAR_045142 |
-
|
US | - | A sporadic cancer | |
225_VAL | ILE | VAR_045143 |
-
|
US | - | Sporadic cancers | |
225_VAL | LEU | VAR_045144 |
rs746504075
|
US | - | A sporadic cancer | |
225_VAL | LEU |
8.3kJPN chr17:7577608 |
rs746504075
|
- | 0.0001 | - | |
226_GLY | ALA | VAR_045145 |
-
|
US | - | Sporadic cancers | |
226_GLY | SER | VAR_045146 |
-
|
US | - | Sporadic cancers | |
226_GLY | VAL | VAR_045147 |
rs970212462
|
US | - | Sporadic cancers | |
226_GLY | ASN | VAR_045844 |
-
|
US | - | A sporadic cancer | |
226_GLY | ASP | VAR_047180 |
-
|
US | - | Sporadic cancers | |
227_SER | CYS | VAR_045148 |
-
|
US | - | Sporadic cancers | |
227_SER | PHE | VAR_045149 |
-
|
US | - | Sporadic cancers | |
227_SER | PRO | VAR_045150 |
-
|
US | - | A sporadic cancer | |
227_SER | THR | VAR_045151 |
-
|
LP/P | - | Li-Fraumeni syndrome (LFS) [MIM:151623] | |
228_ASP | GLU | VAR_005960 |
-
|
US | - | Sporadic cancers | |
228_ASP | ALA | VAR_045152 |
-
|
US | - | Sporadic cancers | |
228_ASP | GLY | VAR_045153 |
-
|
US | - | Sporadic cancers | |
228_ASP | HIS | VAR_045154 |
-
|
US | - | Sporadic cancers | |
228_ASP | ASN | VAR_045155 |
-
|
US | - | Sporadic cancers | |
228_ASP | VAL | VAR_045156 |
-
|
US | - | Sporadic cancers | |
228_ASP | TYR | VAR_045157 |
-
|
US | - | Sporadic cancers | |
228_ASP | PRO | VAR_045845 |
-
|
US | - | A sporadic cancer | |
229_CYS | GLY | VAR_045158 |
-
|
US | - | A sporadic cancer | |
229_CYS | ARG | VAR_045159 |
rs1064794312
|
US | - | Sporadic cancers | |
229_CYS | SER | VAR_045160 |
-
|
US | - | Sporadic cancers | |
229_CYS | TYR | VAR_045161 |
rs1064793603
|
US | - | Sporadic cancers | |
229_CYS | ASN | VAR_045846 |
-
|
US | - | A sporadic cancer | |
230_THR | ILE | VAR_005961 |
-
|
US | - | Sporadic cancers | |
230_THR | ALA | VAR_045162 |
-
|
US | - | Sporadic cancers | |
230_THR | ASN | VAR_045163 |
-
|
US | - | Sporadic cancers | |
230_THR | PRO | VAR_045164 |
-
|
US | - | Sporadic cancers | |
230_THR | SER | VAR_045165 |
-
|
US | - | Sporadic cancers | |
231_THR | ALA | VAR_045166 |
-
|
US | - | Sporadic cancers | |
231_THR | ILE | VAR_045167 |
rs1555525564
|
US | - | Sporadic cancers | |
231_THR | ASN | VAR_045168 |
-
|
US | - | Sporadic cancers | |
231_THR | SER | VAR_045169 |
-
|
US | - | Sporadic cancers | |
231_THR | ALA |
8.3kJPN chr17:7577590 |
-
|
- | 0.0001 | - | |
232_ILE | THR | VAR_005962 |
rs587781589
|
US | - | Sporadic cancers | |
232_ILE | PHE | VAR_045170 |
-
|
US | - | Sporadic cancers | |
232_ILE | LEU | VAR_045171 |
rs1555525562
|
US | - | Sporadic cancers | |
232_ILE | ASN | VAR_045172 |
-
|
US | - | Sporadic cancers | |
232_ILE | SER | VAR_045173 |
-
|
US | - | Sporadic cancers | |
232_ILE | VAL | VAR_045174 |
-
|
US | - | Sporadic cancers | |
232_ILE | THR |
ClinVar chr17:7577586 |
rs587781589
|
Pathogenic/Likely pathogenic | - | Hereditary cancer-predisposing syndrome|not specified|not provided [MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162|MedGen:CN169374|MedGen:C3661900] | |
232_ILE | SER |
ClinVar chr17:7577586 |
rs587781589
|
Pathogenic | - | Neoplasm of ovary|Hereditary cancer-predisposing syndrome [Human Phenotype Ontology:HP:0100615,MONDO:MONDO:0021068,MeSH:D010051,MedGen:C0919267,OMIM:167000|MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162] | |
232_ILE | ASN |
ClinVar chr17:7577586 |
rs587781589
|
Pathogenic/Likely pathogenic | - | Li-Fraumeni syndrome [MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524] | |
233_HIS | ASP | VAR_045175 |
-
|
LP/P | - | Li-Fraumeni syndrome (LFS) [MIM:151623] | |
233_HIS | LEU | VAR_045176 |
-
|
US | - | Sporadic cancers | |
233_HIS | PRO | VAR_045177 |
-
|
US | - | A sporadic cancer | |
233_HIS | GLN | VAR_045178 |
-
|
US | - | Sporadic cancers | |
233_HIS | TYR | VAR_045179 |
-
|
US | - | Sporadic cancers | |
233_HIS | ARG | VAR_047181 |
rs879254233
|
US | - | Sporadic cancers | |
234_TYR | CYS | VAR_005963 |
rs587780073
|
LP/P | - | Li-Fraumeni syndrome (LFS) [MIM:151623] | |
234_TYR | HIS | VAR_005964 |
rs864622237
|
US | - | Sporadic cancers | |
234_TYR | ASP | VAR_045180 |
rs864622237
|
US | - | Sporadic cancers | |
234_TYR | PHE | VAR_045181 |
-
|
US | - | A sporadic cancer | |
234_TYR | ASN | VAR_045182 |
rs864622237
|
US | - | Sporadic cancers | |
234_TYR | SER | VAR_045183 |
rs587780073
|
US | - | Sporadic cancers | |
234_TYR | LYS | VAR_045847 |
-
|
US | - | A sporadic cancer | |
234_TYR | GLN | VAR_045848 |
-
|
US | - | A sporadic cancer | |
234_TYR | CYS |
ClinVar chr17:7577580 |
rs587780073
|
Pathogenic/Likely pathogenic | - | not provided|Li-Fraumeni syndrome|Neoplasm of the large intestine|Transitional cell carcinoma of the bladder|Prostate adenocarcinoma|Pancreatic adenocarcinoma|Ovarian serous cystadenocarcinoma|Glioblastoma|Squamous cell lung carcinoma|Hepatocellular carcinoma|Gastric adenocarcinoma|Small cell lung carcinoma|Squamous cell carcinoma of the head and neck|Hereditary cancer-predisposing syndrome|Breast neoplasm|Carcinoma of esophagus|Adrenal cortex carcinoma|Neoplasm of ovary|Li-Fraumeni syndrome 1 [MedGen:C3661900|MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|Human Phenotype Ontology:HP:0006740,MONDO:MONDO:0005611,MedGen:C0279680|MONDO:MONDO:0005082,MedGen:C0007112|Human Phenotype Ontology:HP:0006725,MONDO:MONDO:0006047,MedGen:C0281361|MONDO:MONDO:0006046,MedGen:C0279663|MONDO:MONDO:0018177,MeSH:D005909,MedGen:C0017636,Orphanet:360|Human Phenotype Ontology:HP:0030359,MONDO:MONDO:0005097,MedGen:C0149782|Human Phenotype Ontology:HP:0001402,Human Phenotype Ontology:HP:0002899,Human Phenotype Ontology:HP:0003007,Human Phenotype Ontology:HP:0006750,MONDO:MONDO:0007256,MedGen:C2239176,OMIM:114550,Orphanet:88673|Human Phenotype Ontology:HP:0033770,MONDO:MONDO:0005036,MedGen:C0278701|Human Phenotype Ontology:HP:0030357,MONDO:MONDO:0008433,MeSH:D055752,MedGen:C0149925,OMIM:182280,Orphanet:70573|MONDO:MONDO:0010150,MeSH:D000077195,MedGen:C1168401,OMIM:275355,Orphanet:67037|MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162|Human Phenotype Ontology:HP:0010623,Human Phenotype Ontology:HP:0100013,MONDO:MONDO:0021100,MeSH:D001943,MedGen:C1458155|Human Phenotype Ontology:HP:0011459,MONDO:MONDO:0019086,MedGen:C0152018,Orphanet:70482|Human Phenotype Ontology:HP:0002889,Human Phenotype Ontology:HP:0006744,Human Phenotype Ontology:HP:0006759,MONDO:MONDO:0006639,MeSH:D018268,MedGen:C0206686,Orphanet:1501|Human Phenotype Ontology:HP:0100615,MONDO:MONDO:0021068,MeSH:D010051,MedGen:C0919267,OMIM:167000|Gene:553989,MedGen:C1835398,OMIM:151623,Orphanet:524] | |
234_TYR | ASP |
ClinVar chr17:7577581 |
rs864622237
|
Pathogenic | - | Li-Fraumeni syndrome|Squamous cell carcinoma of the head and neck|Carcinoma of esophagus|Adrenal cortex carcinoma|Breast neoplasm|Transitional cell carcinoma of the bladder|Prostate adenocarcinoma|Hereditary cancer-predisposing syndrome|Pancreatic adenocarcinoma|Gastric adenocarcinoma|Neoplasm of the large intestine|Hepatocellular carcinoma|Squamous cell lung carcinoma|Small cell lung carcinoma|Glioblastoma|Ovarian serous cystadenocarcinoma [MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524|MONDO:MONDO:0010150,MeSH:D000077195,MedGen:C1168401,OMIM:275355,Orphanet:67037|Human Phenotype Ontology:HP:0011459,MONDO:MONDO:0019086,MedGen:C0152018,Orphanet:70482|Human Phenotype Ontology:HP:0002889,Human Phenotype Ontology:HP:0006744,Human Phenotype Ontology:HP:0006759,MONDO:MONDO:0006639,MeSH:D018268,MedGen:C0206686,Orphanet:1501|Human Phenotype Ontology:HP:0010623,Human Phenotype Ontology:HP:0100013,MONDO:MONDO:0021100,MeSH:D001943,MedGen:C1458155|Human Phenotype Ontology:HP:0006740,MONDO:MONDO:0005611,MedGen:C0279680|MONDO:MONDO:0005082,MedGen:C0007112|MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162|Human Phenotype Ontology:HP:0006725,MONDO:MONDO:0006047,MedGen:C0281361|Human Phenotype Ontology:HP:0033770,MONDO:MONDO:0005036,MedGen:C0278701|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|Human Phenotype Ontology:HP:0001402,Human Phenotype Ontology:HP:0002899,Human Phenotype Ontology:HP:0003007,Human Phenotype Ontology:HP:0006750,MONDO:MONDO:0007256,MedGen:C2239176,OMIM:114550,Orphanet:88673|Human Phenotype Ontology:HP:0030359,MONDO:MONDO:0005097,MedGen:C0149782|Human Phenotype Ontology:HP:0030357,MONDO:MONDO:0008433,MeSH:D055752,MedGen:C0149925,OMIM:182280,Orphanet:70573|MONDO:MONDO:0018177,MeSH:D005909,MedGen:C0017636,Orphanet:360|MONDO:MONDO:0006046,MedGen:C0279663] | |
234_TYR | HIS |
ClinVar chr17:7577581 |
rs864622237
|
Pathogenic | - | Gastric adenocarcinoma|Small cell lung carcinoma|Hepatocellular carcinoma|Ovarian serous cystadenocarcinoma|Adrenal cortex carcinoma|Carcinoma of esophagus|Glioblastoma|Transitional cell carcinoma of the bladder|Squamous cell carcinoma of the head and neck|Prostate adenocarcinoma|Pancreatic adenocarcinoma|Breast neoplasm|Squamous cell lung carcinoma|Neoplasm of the large intestine|Li-Fraumeni syndrome|Hereditary cancer-predisposing syndrome|Neoplasm of ovary|Li-Fraumeni syndrome 1 [Human Phenotype Ontology:HP:0033770,MONDO:MONDO:0005036,MedGen:C0278701|Human Phenotype Ontology:HP:0030357,MONDO:MONDO:0008433,MeSH:D055752,MedGen:C0149925,OMIM:182280,Orphanet:70573|Human Phenotype Ontology:HP:0001402,Human Phenotype Ontology:HP:0002899,Human Phenotype Ontology:HP:0003007,Human Phenotype Ontology:HP:0006750,MONDO:MONDO:0007256,MedGen:C2239176,OMIM:114550,Orphanet:88673|MONDO:MONDO:0006046,MedGen:C0279663|Human Phenotype Ontology:HP:0002889,Human Phenotype Ontology:HP:0006744,Human Phenotype Ontology:HP:0006759,MONDO:MONDO:0006639,MeSH:D018268,MedGen:C0206686,Orphanet:1501|Human Phenotype Ontology:HP:0011459,MONDO:MONDO:0019086,MedGen:C0152018,Orphanet:70482|MONDO:MONDO:0018177,MeSH:D005909,MedGen:C0017636,Orphanet:360|Human Phenotype Ontology:HP:0006740,MONDO:MONDO:0005611,MedGen:C0279680|MONDO:MONDO:0010150,MeSH:D000077195,MedGen:C1168401,OMIM:275355,Orphanet:67037|MONDO:MONDO:0005082,MedGen:C0007112|Human Phenotype Ontology:HP:0006725,MONDO:MONDO:0006047,MedGen:C0281361|Human Phenotype Ontology:HP:0010623,Human Phenotype Ontology:HP:0100013,MONDO:MONDO:0021100,MeSH:D001943,MedGen:C1458155|Human Phenotype Ontology:HP:0030359,MONDO:MONDO:0005097,MedGen:C0149782|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524|MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162|Human Phenotype Ontology:HP:0100615,MONDO:MONDO:0021068,MeSH:D010051,MedGen:C0919267,OMIM:167000|Gene:553989,MedGen:C1835398,OMIM:151623,Orphanet:524] | |
234_TYR | ASN |
ClinVar chr17:7577581 |
rs864622237
|
Pathogenic | - | Adrenal cortex carcinoma|Breast neoplasm|Transitional cell carcinoma of the bladder|Prostate adenocarcinoma|Squamous cell lung carcinoma|Pancreatic adenocarcinoma|Carcinoma of esophagus|Hepatocellular carcinoma|Ovarian serous cystadenocarcinoma|Glioblastoma|Squamous cell carcinoma of the head and neck|Gastric adenocarcinoma|Neoplasm of the large intestine|Small cell lung carcinoma|Li-Fraumeni syndrome|Hereditary cancer-predisposing syndrome [Human Phenotype Ontology:HP:0002889,Human Phenotype Ontology:HP:0006744,Human Phenotype Ontology:HP:0006759,MONDO:MONDO:0006639,MeSH:D018268,MedGen:C0206686,Orphanet:1501|Human Phenotype Ontology:HP:0010623,Human Phenotype Ontology:HP:0100013,MONDO:MONDO:0021100,MeSH:D001943,MedGen:C1458155|Human Phenotype Ontology:HP:0006740,MONDO:MONDO:0005611,MedGen:C0279680|MONDO:MONDO:0005082,MedGen:C0007112|Human Phenotype Ontology:HP:0030359,MONDO:MONDO:0005097,MedGen:C0149782|Human Phenotype Ontology:HP:0006725,MONDO:MONDO:0006047,MedGen:C0281361|Human Phenotype Ontology:HP:0011459,MONDO:MONDO:0019086,MedGen:C0152018,Orphanet:70482|Human Phenotype Ontology:HP:0001402,Human Phenotype Ontology:HP:0002899,Human Phenotype Ontology:HP:0003007,Human Phenotype Ontology:HP:0006750,MONDO:MONDO:0007256,MedGen:C2239176,OMIM:114550,Orphanet:88673|MONDO:MONDO:0006046,MedGen:C0279663|MONDO:MONDO:0018177,MeSH:D005909,MedGen:C0017636,Orphanet:360|MONDO:MONDO:0010150,MeSH:D000077195,MedGen:C1168401,OMIM:275355,Orphanet:67037|Human Phenotype Ontology:HP:0033770,MONDO:MONDO:0005036,MedGen:C0278701|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|Human Phenotype Ontology:HP:0030357,MONDO:MONDO:0008433,MeSH:D055752,MedGen:C0149925,OMIM:182280,Orphanet:70573|MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524|MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162] | |
234_TYR | TER |
ClinVar chr17:7577579 |
rs2151021924
|
Pathogenic | - | Li-Fraumeni syndrome [MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524] | |
234_TYR | TER |
ClinVar chr17:7577579 |
-
|
Pathogenic | - | TP53-related condition|Li-Fraumeni syndrome [|MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524] | |
235_ASN | HIS | VAR_045184 |
-
|
US | - | A sporadic cancer | |
235_ASN | ILE | VAR_045185 |
rs144340710
|
US | - | Sporadic cancers | |
235_ASN | SER | VAR_045186 |
rs144340710
|
LP/P | - | Li-Fraumeni syndrome (LFS) [MIM:151623] | |
235_ASN | THR | VAR_045187 |
-
|
US | - | Sporadic cancers | |
235_ASN | TYR | VAR_045188 |
rs786204145
|
US | - | Sporadic cancers | |
235_ASN | MET | VAR_045849 |
-
|
US | - | A sporadic cancer | |
235_ASN | ASP | VAR_047182 |
-
|
US | - | An adrenocortical carcinoma with no family history | |
235_ASN | SER |
gnomAD chr17:7577577 |
rs144340710
|
- | 0.000178938 | - | |
236_TYR | CYS | VAR_045189 |
rs730882026
|
LP/P | - | Li-Fraumeni syndrome (LFS) [MIM:151623] | |
236_TYR | ASP | VAR_045190 |
rs587782289
|
US | - | Sporadic cancers | |
236_TYR | PHE | VAR_045191 |
-
|
US | - | A sporadic cancer | |
236_TYR | HIS | VAR_045192 |
rs587782289
|
US | - | Sporadic cancers | |
236_TYR | ASN | VAR_045193 |
rs587782289
|
US | - | Sporadic cancers | |
236_TYR | SER | VAR_045194 |
rs730882026
|
US | - | Sporadic cancers | |
236_TYR | HIS |
ClinVar chr17:7577575 |
rs587782289
|
Pathogenic | - | Li-Fraumeni syndrome|Hereditary cancer-predisposing syndrome [MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524|MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162] | |
236_TYR | TER |
ClinVar chr17:7577573 |
rs1597365202
|
Pathogenic | - | Familial cancer of breast|Hereditary cancer-predisposing syndrome [MONDO:MONDO:0016419,MedGen:C0346153,OMIM:114480,Orphanet:227535|MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162] | |
236_TYR | TER |
ClinVar chr17:7577573 |
-
|
Pathogenic | - | not provided [MedGen:C3661900] | |
237_MET | ILE | VAR_005965 |
rs587782664
|
LP/P | - | Li-Fraumeni syndrome (LFS) [MIM:151623] | |
237_MET | LYS | VAR_045195 |
rs765848205
|
US | - | Sporadic cancers | |
237_MET | LEU | VAR_045196 |
-
|
US | - | Sporadic cancers | |
237_MET | ARG | VAR_045197 |
rs765848205
|
US | - | Sporadic cancers | |
237_MET | THR | VAR_045198 |
-
|
US | - | Sporadic cancers | |
237_MET | VAL | VAR_045199 |
rs730882004
|
US | - | Sporadic cancers | |
237_MET | ILE |
ClinVar chr17:7577570 |
rs587782664
|
Pathogenic | - | Hereditary cancer-predisposing syndrome|Ovarian serous cystadenocarcinoma|Malignant neoplasm of body of uterus|Gastric adenocarcinoma|Breast neoplasm|Pancreatic adenocarcinoma|Lung adenocarcinoma|Neoplasm of the large intestine|Carcinoma of esophagus|Neoplasm of ovary|Neoplasm of brain|Brainstem glioma|Squamous cell carcinoma of the head and neck|Squamous cell lung carcinoma|Li-Fraumeni syndrome|Breast and/or ovarian cancer|not specified|Li-Fraumeni syndrome 1|not provided|Adrenocortical carcinoma, hereditary [MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162|MONDO:MONDO:0006046,MedGen:C0279663|MedGen:C0153574|Human Phenotype Ontology:HP:0033770,MONDO:MONDO:0005036,MedGen:C0278701|Human Phenotype Ontology:HP:0010623,Human Phenotype Ontology:HP:0100013,MONDO:MONDO:0021100,MeSH:D001943,MedGen:C1458155|Human Phenotype Ontology:HP:0006725,MONDO:MONDO:0006047,MedGen:C0281361|Human Phenotype Ontology:HP:0030078,MONDO:MONDO:0005061,MeSH:D000077192,MedGen:C0152013|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|Human Phenotype Ontology:HP:0011459,MONDO:MONDO:0019086,MedGen:C0152018,Orphanet:70482|Human Phenotype Ontology:HP:0100615,MONDO:MONDO:0021068,MeSH:D010051,MedGen:C0919267,OMIM:167000|Human Phenotype Ontology:HP:0030692,MONDO:MONDO:0021211,MeSH:D001932,MedGen:C0006118|Human Phenotype Ontology:HP:0010796,MONDO:MONDO:0002911,MedGen:C0677865|MONDO:MONDO:0010150,MeSH:D000077195,MedGen:C1168401,OMIM:275355,Orphanet:67037|Human Phenotype Ontology:HP:0030359,MONDO:MONDO:0005097,MedGen:C0149782|MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524|MedGen:CN221562|MedGen:CN169374|Gene:553989,MedGen:C1835398,OMIM:151623,Orphanet:524|MedGen:C3661900|MONDO:MONDO:0008734,MedGen:C1859972,OMIM:202300,Orphanet:1501] | |
237_MET | LYS |
ClinVar chr17:7577571 |
rs765848205
|
Pathogenic | - | Malignant neoplasm of body of uterus|Squamous cell lung carcinoma|Squamous cell carcinoma of the head and neck|Gastric adenocarcinoma|Pancreatic adenocarcinoma|Neoplasm of brain|Brainstem glioma|Lung adenocarcinoma|Breast neoplasm|Neoplasm of the large intestine|Carcinoma of esophagus|Ovarian serous cystadenocarcinoma|Li-Fraumeni syndrome|Acute myeloid leukemia [MedGen:C0153574|Human Phenotype Ontology:HP:0030359,MONDO:MONDO:0005097,MedGen:C0149782|MONDO:MONDO:0010150,MeSH:D000077195,MedGen:C1168401,OMIM:275355,Orphanet:67037|Human Phenotype Ontology:HP:0033770,MONDO:MONDO:0005036,MedGen:C0278701|Human Phenotype Ontology:HP:0006725,MONDO:MONDO:0006047,MedGen:C0281361|Human Phenotype Ontology:HP:0030692,MONDO:MONDO:0021211,MeSH:D001932,MedGen:C0006118|Human Phenotype Ontology:HP:0010796,MONDO:MONDO:0002911,MedGen:C0677865|Human Phenotype Ontology:HP:0030078,MONDO:MONDO:0005061,MeSH:D000077192,MedGen:C0152013|Human Phenotype Ontology:HP:0010623,Human Phenotype Ontology:HP:0100013,MONDO:MONDO:0021100,MeSH:D001943,MedGen:C1458155|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|Human Phenotype Ontology:HP:0011459,MONDO:MONDO:0019086,MedGen:C0152018,Orphanet:70482|MONDO:MONDO:0006046,MedGen:C0279663|MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524|Human Phenotype Ontology:HP:0001914,Human Phenotype Ontology:HP:0004808,Human Phenotype Ontology:HP:0004843,Human Phenotype Ontology:HP:0005516,Human Phenotype Ontology:HP:0006724,Human Phenotype Ontology:HP:0006728,MONDO:MONDO:0018874,MeSH:D015470,MedGen:C0023467,OMIM:601626,Orphanet:519] | |
237_MET | ILE |
ClinVar chr17:7577570 |
rs587782664
|
Pathogenic/Likely pathogenic | - | Neoplasm of ovary|Hereditary cancer-predisposing syndrome|Adrenocortical carcinoma, hereditary|Malignant tumor of urinary bladder|Li-Fraumeni syndrome [Human Phenotype Ontology:HP:0100615,MONDO:MONDO:0021068,MeSH:D010051,MedGen:C0919267,OMIM:167000|MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162|MONDO:MONDO:0008734,MedGen:C1859972,OMIM:202300,Orphanet:1501|MONDO:MONDO:0001187,MedGen:C0005684,OMIM:109800,Orphanet:157980|MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524] | |
237_MET | ILE |
ClinVar chr17:7577570 |
-
|
Pathogenic | - | Hereditary cancer-predisposing syndrome [MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162] | |
238_CYS | PHE | VAR_005966 |
rs730882005
|
US | - | Sporadic cancers | |
238_CYS | TYR | VAR_005967 |
rs730882005
|
US | - | A familial cancer not matching LFS | |
238_CYS | GLY | VAR_045200 |
rs1057519981
|
LP/P | - | Li-Fraumeni syndrome (LFS) [MIM:151623] | |
238_CYS | ARG | VAR_045201 |
rs1057519981
|
US | - | Sporadic cancers | |
238_CYS | SER | VAR_045202 |
rs730882005
|
LP/P | - | Li-Fraumeni syndrome (LFS) [MIM:151623] | |
238_CYS | TRP | VAR_045203 |
rs193920789
|
US | - | Sporadic cancers | |
238_CYS | HIS | VAR_045850 |
-
|
US | - | A sporadic cancer | |
238_CYS | TRP |
ClinVar chr17:7577567 |
rs193920789
|
Pathogenic/Likely pathogenic | - | Malignant tumor of prostate|Li-Fraumeni syndrome|Hereditary cancer-predisposing syndrome [Human Phenotype Ontology:HP:0012125,MONDO:MONDO:0008315,MedGen:C0376358,OMIM:176807,Orphanet:1331|MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524|MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162] | |
238_CYS | TYR |
ClinVar chr17:7577568 |
rs730882005
|
Pathogenic/Likely pathogenic | - | Hereditary cancer-predisposing syndrome|Li-Fraumeni syndrome|Gastric adenocarcinoma|Carcinoma of esophagus|Transitional cell carcinoma of the bladder|Breast neoplasm|Malignant neoplasm of body of uterus|Neoplasm of the large intestine|Squamous cell carcinoma of the head and neck|Multiple myeloma|Ovarian serous cystadenocarcinoma|Neoplasm of uterine cervix|not provided|Hepatocellular carcinoma|Lung adenocarcinoma|Neoplasm of brain|B-cell chronic lymphocytic leukemia|Glioblastoma|Uterine carcinosarcoma|Pancreatic adenocarcinoma|Neoplasm of ovary|Li-Fraumeni syndrome 1|Gallbladder cancer|Adrenocortical carcinoma, hereditary [MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162|MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524|Human Phenotype Ontology:HP:0033770,MONDO:MONDO:0005036,MedGen:C0278701|Human Phenotype Ontology:HP:0011459,MONDO:MONDO:0019086,MedGen:C0152018,Orphanet:70482|Human Phenotype Ontology:HP:0006740,MONDO:MONDO:0005611,MedGen:C0279680|Human Phenotype Ontology:HP:0010623,Human Phenotype Ontology:HP:0100013,MONDO:MONDO:0021100,MeSH:D001943,MedGen:C1458155|MedGen:C0153574|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|MONDO:MONDO:0010150,MeSH:D000077195,MedGen:C1168401,OMIM:275355,Orphanet:67037|Human Phenotype Ontology:HP:0006775,MONDO:MONDO:0009693,MeSH:D009101,MedGen:C0026764,OMIM:254500,Orphanet:29073,Orphanet:85443|MONDO:MONDO:0006046,MedGen:C0279663|Human Phenotype Ontology:HP:0032241,MONDO:MONDO:0021230,MeSH:D002583,MedGen:C0007873|MedGen:C3661900|Human Phenotype Ontology:HP:0001402,Human Phenotype Ontology:HP:0002899,Human Phenotype Ontology:HP:0003007,Human Phenotype Ontology:HP:0006750,MONDO:MONDO:0007256,MedGen:C2239176,OMIM:114550,Orphanet:88673|Human Phenotype Ontology:HP:0030078,MONDO:MONDO:0005061,MeSH:D000077192,MedGen:C0152013|Human Phenotype Ontology:HP:0030692,MONDO:MONDO:0021211,MeSH:D001932,MedGen:C0006118|Human Phenotype Ontology:HP:0005550,Human Phenotype Ontology:HP:0006734,Human Phenotype Ontology:HP:0006760,MONDO:MONDO:0004948,MeSH:D015451,MedGen:C0023434,OMIM:151400,Orphanet:67038|MONDO:MONDO:0018177,MeSH:D005909,MedGen:C0017636,Orphanet:360|MONDO:MONDO:0006485,MedGen:C0280630|Human Phenotype Ontology:HP:0006725,MONDO:MONDO:0006047,MedGen:C0281361|Human Phenotype Ontology:HP:0100615,MONDO:MONDO:0021068,MeSH:D010051,MedGen:C0919267,OMIM:167000|Gene:553989,MedGen:C1835398,OMIM:151623,Orphanet:524|MONDO:MONDO:0005411,MedGen:C0153452|MONDO:MONDO:0008734,MedGen:C1859972,OMIM:202300,Orphanet:1501] | |
238_CYS | PHE |
ClinVar chr17:7577568 |
rs730882005
|
Pathogenic/Likely pathogenic | - | Breast neoplasm|Malignant neoplasm of body of uterus|Pancreatic adenocarcinoma|Multiple myeloma|Lung adenocarcinoma|Gastric adenocarcinoma|Squamous cell carcinoma of the head and neck|Neoplasm of brain|Uterine carcinosarcoma|Hepatocellular carcinoma|Neoplasm of uterine cervix|Ovarian serous cystadenocarcinoma|B-cell chronic lymphocytic leukemia|Neoplasm of the large intestine|Glioblastoma|Carcinoma of esophagus|Transitional cell carcinoma of the bladder|Li-Fraumeni syndrome|Hereditary cancer-predisposing syndrome [Human Phenotype Ontology:HP:0010623,Human Phenotype Ontology:HP:0100013,MONDO:MONDO:0021100,MeSH:D001943,MedGen:C1458155|MedGen:C0153574|Human Phenotype Ontology:HP:0006725,MONDO:MONDO:0006047,MedGen:C0281361|Human Phenotype Ontology:HP:0006775,MONDO:MONDO:0009693,MeSH:D009101,MedGen:C0026764,OMIM:254500,Orphanet:29073,Orphanet:85443|Human Phenotype Ontology:HP:0030078,MONDO:MONDO:0005061,MeSH:D000077192,MedGen:C0152013|Human Phenotype Ontology:HP:0033770,MONDO:MONDO:0005036,MedGen:C0278701|MONDO:MONDO:0010150,MeSH:D000077195,MedGen:C1168401,OMIM:275355,Orphanet:67037|Human Phenotype Ontology:HP:0030692,MONDO:MONDO:0021211,MeSH:D001932,MedGen:C0006118|MONDO:MONDO:0006485,MedGen:C0280630|Human Phenotype Ontology:HP:0001402,Human Phenotype Ontology:HP:0002899,Human Phenotype Ontology:HP:0003007,Human Phenotype Ontology:HP:0006750,MONDO:MONDO:0007256,MedGen:C2239176,OMIM:114550,Orphanet:88673|Human Phenotype Ontology:HP:0032241,MONDO:MONDO:0021230,MeSH:D002583,MedGen:C0007873|MONDO:MONDO:0006046,MedGen:C0279663|Human Phenotype Ontology:HP:0005550,Human Phenotype Ontology:HP:0006734,Human Phenotype Ontology:HP:0006760,MONDO:MONDO:0004948,MeSH:D015451,MedGen:C0023434,OMIM:151400,Orphanet:67038|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|MONDO:MONDO:0018177,MeSH:D005909,MedGen:C0017636,Orphanet:360|Human Phenotype Ontology:HP:0011459,MONDO:MONDO:0019086,MedGen:C0152018,Orphanet:70482|Human Phenotype Ontology:HP:0006740,MONDO:MONDO:0005611,MedGen:C0279680|MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524|MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162] | |
238_CYS | SER |
ClinVar chr17:7577568 |
rs730882005
|
Pathogenic/Likely pathogenic | - | Neoplasm of brain|Squamous cell carcinoma of the head and neck|Malignant neoplasm of body of uterus|Gastric adenocarcinoma|B-cell chronic lymphocytic leukemia|Transitional cell carcinoma of the bladder|Glioblastoma|Uterine carcinosarcoma|Neoplasm of the large intestine|Breast neoplasm|Carcinoma of esophagus|Hepatocellular carcinoma|Neoplasm of uterine cervix|Ovarian serous cystadenocarcinoma|Multiple myeloma|Lung adenocarcinoma|Pancreatic adenocarcinoma|Li-Fraumeni syndrome|Li-Fraumeni syndrome 1|not provided|Hereditary cancer-predisposing syndrome [Human Phenotype Ontology:HP:0030692,MONDO:MONDO:0021211,MeSH:D001932,MedGen:C0006118|MONDO:MONDO:0010150,MeSH:D000077195,MedGen:C1168401,OMIM:275355,Orphanet:67037|MedGen:C0153574|Human Phenotype Ontology:HP:0033770,MONDO:MONDO:0005036,MedGen:C0278701|Human Phenotype Ontology:HP:0005550,Human Phenotype Ontology:HP:0006734,Human Phenotype Ontology:HP:0006760,MONDO:MONDO:0004948,MeSH:D015451,MedGen:C0023434,OMIM:151400,Orphanet:67038|Human Phenotype Ontology:HP:0006740,MONDO:MONDO:0005611,MedGen:C0279680|MONDO:MONDO:0018177,MeSH:D005909,MedGen:C0017636,Orphanet:360|MONDO:MONDO:0006485,MedGen:C0280630|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|Human Phenotype Ontology:HP:0010623,Human Phenotype Ontology:HP:0100013,MONDO:MONDO:0021100,MeSH:D001943,MedGen:C1458155|Human Phenotype Ontology:HP:0011459,MONDO:MONDO:0019086,MedGen:C0152018,Orphanet:70482|Human Phenotype Ontology:HP:0001402,Human Phenotype Ontology:HP:0002899,Human Phenotype Ontology:HP:0003007,Human Phenotype Ontology:HP:0006750,MONDO:MONDO:0007256,MedGen:C2239176,OMIM:114550,Orphanet:88673|Human Phenotype Ontology:HP:0032241,MONDO:MONDO:0021230,MeSH:D002583,MedGen:C0007873|MONDO:MONDO:0006046,MedGen:C0279663|Human Phenotype Ontology:HP:0006775,MONDO:MONDO:0009693,MeSH:D009101,MedGen:C0026764,OMIM:254500,Orphanet:29073,Orphanet:85443|Human Phenotype Ontology:HP:0030078,MONDO:MONDO:0005061,MeSH:D000077192,MedGen:C0152013|Human Phenotype Ontology:HP:0006725,MONDO:MONDO:0006047,MedGen:C0281361|MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524|Gene:553989,MedGen:C1835398,OMIM:151623,Orphanet:524|MedGen:C3661900|MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162] | |
238_CYS | ARG |
ClinVar chr17:7577569 |
rs1057519981
|
Pathogenic | - | Glioblastoma|Neoplasm of uterine cervix|B-cell chronic lymphocytic leukemia|Multiple myeloma|Pancreatic adenocarcinoma|Gastric adenocarcinoma|Hepatocellular carcinoma|Ovarian serous cystadenocarcinoma|Neoplasm of brain|Uterine carcinosarcoma|Neoplasm of the large intestine|Malignant neoplasm of body of uterus|Squamous cell carcinoma of the head and neck|Carcinoma of esophagus|Breast neoplasm|Hereditary cancer-predisposing syndrome|Lung adenocarcinoma|Transitional cell carcinoma of the bladder|Li-Fraumeni syndrome|Li-Fraumeni syndrome 1 [MONDO:MONDO:0018177,MeSH:D005909,MedGen:C0017636,Orphanet:360|Human Phenotype Ontology:HP:0032241,MONDO:MONDO:0021230,MeSH:D002583,MedGen:C0007873|Human Phenotype Ontology:HP:0005550,Human Phenotype Ontology:HP:0006734,Human Phenotype Ontology:HP:0006760,MONDO:MONDO:0004948,MeSH:D015451,MedGen:C0023434,OMIM:151400,Orphanet:67038|Human Phenotype Ontology:HP:0006775,MONDO:MONDO:0009693,MeSH:D009101,MedGen:C0026764,OMIM:254500,Orphanet:29073,Orphanet:85443|Human Phenotype Ontology:HP:0006725,MONDO:MONDO:0006047,MedGen:C0281361|Human Phenotype Ontology:HP:0033770,MONDO:MONDO:0005036,MedGen:C0278701|Human Phenotype Ontology:HP:0001402,Human Phenotype Ontology:HP:0002899,Human Phenotype Ontology:HP:0003007,Human Phenotype Ontology:HP:0006750,MONDO:MONDO:0007256,MedGen:C2239176,OMIM:114550,Orphanet:88673|MONDO:MONDO:0006046,MedGen:C0279663|Human Phenotype Ontology:HP:0030692,MONDO:MONDO:0021211,MeSH:D001932,MedGen:C0006118|MONDO:MONDO:0006485,MedGen:C0280630|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|MedGen:C0153574|MONDO:MONDO:0010150,MeSH:D000077195,MedGen:C1168401,OMIM:275355,Orphanet:67037|Human Phenotype Ontology:HP:0011459,MONDO:MONDO:0019086,MedGen:C0152018,Orphanet:70482|Human Phenotype Ontology:HP:0010623,Human Phenotype Ontology:HP:0100013,MONDO:MONDO:0021100,MeSH:D001943,MedGen:C1458155|MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162|Human Phenotype Ontology:HP:0030078,MONDO:MONDO:0005061,MeSH:D000077192,MedGen:C0152013|Human Phenotype Ontology:HP:0006740,MONDO:MONDO:0005611,MedGen:C0279680|MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524|Gene:553989,MedGen:C1835398,OMIM:151623,Orphanet:524] | |
238_CYS | GLY |
ClinVar chr17:7577569 |
rs1057519981
|
Pathogenic | - | Lung adenocarcinoma|Uterine carcinosarcoma|Carcinoma of esophagus|Neoplasm of uterine cervix|Transitional cell carcinoma of the bladder|Ovarian serous cystadenocarcinoma|Neoplasm of the large intestine|Pancreatic adenocarcinoma|B-cell chronic lymphocytic leukemia|Malignant neoplasm of body of uterus|Breast neoplasm|Multiple myeloma|Squamous cell carcinoma of the head and neck|Glioblastoma|Gastric adenocarcinoma|Neoplasm of brain|Hepatocellular carcinoma|Neoplasm of ovary|Li-Fraumeni syndrome|Hereditary cancer-predisposing syndrome [Human Phenotype Ontology:HP:0030078,MONDO:MONDO:0005061,MeSH:D000077192,MedGen:C0152013|MONDO:MONDO:0006485,MedGen:C0280630|Human Phenotype Ontology:HP:0011459,MONDO:MONDO:0019086,MedGen:C0152018,Orphanet:70482|Human Phenotype Ontology:HP:0032241,MONDO:MONDO:0021230,MeSH:D002583,MedGen:C0007873|Human Phenotype Ontology:HP:0006740,MONDO:MONDO:0005611,MedGen:C0279680|MONDO:MONDO:0006046,MedGen:C0279663|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|Human Phenotype Ontology:HP:0006725,MONDO:MONDO:0006047,MedGen:C0281361|Human Phenotype Ontology:HP:0005550,Human Phenotype Ontology:HP:0006734,Human Phenotype Ontology:HP:0006760,MONDO:MONDO:0004948,MeSH:D015451,MedGen:C0023434,OMIM:151400,Orphanet:67038|MedGen:C0153574|Human Phenotype Ontology:HP:0010623,Human Phenotype Ontology:HP:0100013,MONDO:MONDO:0021100,MeSH:D001943,MedGen:C1458155|Human Phenotype Ontology:HP:0006775,MONDO:MONDO:0009693,MeSH:D009101,MedGen:C0026764,OMIM:254500,Orphanet:29073,Orphanet:85443|MONDO:MONDO:0010150,MeSH:D000077195,MedGen:C1168401,OMIM:275355,Orphanet:67037|MONDO:MONDO:0018177,MeSH:D005909,MedGen:C0017636,Orphanet:360|Human Phenotype Ontology:HP:0033770,MONDO:MONDO:0005036,MedGen:C0278701|Human Phenotype Ontology:HP:0030692,MONDO:MONDO:0021211,MeSH:D001932,MedGen:C0006118|Human Phenotype Ontology:HP:0001402,Human Phenotype Ontology:HP:0002899,Human Phenotype Ontology:HP:0003007,Human Phenotype Ontology:HP:0006750,MONDO:MONDO:0007256,MedGen:C2239176,OMIM:114550,Orphanet:88673|Human Phenotype Ontology:HP:0100615,MONDO:MONDO:0021068,MeSH:D010051,MedGen:C0919267,OMIM:167000|MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524|MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162] | |
238_CYS | TYR |
8.3kJPN chr17:7577568 |
rs730882005
|
- | 0.0001 | - | |
239_ASN | ASP | VAR_045204 |
rs876660807
|
US | - | Sporadic cancers | |
239_ASN | HIS | VAR_045205 |
-
|
US | - | A sporadic cancer | |
239_ASN | ILE | VAR_045206 |
-
|
US | - | A sporadic cancer | |
239_ASN | LYS | VAR_045207 |
rs1057522275
|
US | - | Sporadic cancers | |
239_ASN | SER | VAR_045208 |
rs1057519999
|
US | - | Sporadic cancers | |
239_ASN | THR | VAR_045209 |
rs1057519999
|
US | - | Sporadic cancers | |
239_ASN | TYR | VAR_045210 |
-
|
US | - | Sporadic cancers | |
239_ASN | SER |
ClinVar chr17:7577565 |
rs1057519999
|
Likely pathogenic | - | Neoplasm of the large intestine|Papillary renal cell carcinoma type 1|Malignant neoplasm of body of uterus|Breast neoplasm|Lung adenocarcinoma|Gastric adenocarcinoma|Hepatocellular carcinoma|Squamous cell carcinoma of the head and neck|Ovarian serous cystadenocarcinoma|Uterine carcinosarcoma|Prostate adenocarcinoma|Hereditary cancer-predisposing syndrome|Li-Fraumeni syndrome 1|Li-Fraumeni syndrome|not provided [Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|Human Phenotype Ontology:HP:0011797,MedGen:C1336839,OMIM:605074,Orphanet:47044|MedGen:C0153574|Human Phenotype Ontology:HP:0010623,Human Phenotype Ontology:HP:0100013,MONDO:MONDO:0021100,MeSH:D001943,MedGen:C1458155|Human Phenotype Ontology:HP:0030078,MONDO:MONDO:0005061,MeSH:D000077192,MedGen:C0152013|Human Phenotype Ontology:HP:0033770,MONDO:MONDO:0005036,MedGen:C0278701|Human Phenotype Ontology:HP:0001402,Human Phenotype Ontology:HP:0002899,Human Phenotype Ontology:HP:0003007,Human Phenotype Ontology:HP:0006750,MONDO:MONDO:0007256,MedGen:C2239176,OMIM:114550,Orphanet:88673|MONDO:MONDO:0010150,MeSH:D000077195,MedGen:C1168401,OMIM:275355,Orphanet:67037|MONDO:MONDO:0006046,MedGen:C0279663|MONDO:MONDO:0006485,MedGen:C0280630|MONDO:MONDO:0005082,MedGen:C0007112|MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162|Gene:553989,MedGen:C1835398,OMIM:151623,Orphanet:524|MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524|MedGen:C3661900] | |
240_SER | ILE | VAR_005968 |
-
|
US | - | Sporadic cancers | |
240_SER | CYS | VAR_045211 |
-
|
US | - | Sporadic cancers | |
240_SER | GLY | VAR_045212 |
-
|
US | - | Sporadic cancers | |
240_SER | ASN | VAR_045213 |
-
|
US | - | Sporadic cancers | |
240_SER | PRO | VAR_045214 |
-
|
US | - | A sporadic cancer | |
240_SER | ARG | VAR_045215 |
-
|
US | - | Sporadic cancers | |
240_SER | THR | VAR_045216 |
-
|
US | - | Sporadic cancers | |
240_SER | GLY |
ClinVar chr17:7577563 |
rs1567549584
|
Pathogenic/Likely pathogenic | - | Li-Fraumeni syndrome|Squamous cell carcinoma of the head and neck|Li-Fraumeni syndrome 1|Hereditary cancer-predisposing syndrome [MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524|MONDO:MONDO:0010150,MeSH:D000077195,MedGen:C1168401,OMIM:275355,Orphanet:67037|Gene:553989,MedGen:C1835398,OMIM:151623,Orphanet:524|MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162] | |
240_SER | ARG |
ClinVar chr17:7577563 |
rs1567549584
|
Likely pathogenic | - | Hereditary cancer-predisposing syndrome [MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162] | |
240_SER | ASN |
ClinVar chr17:7577562 |
-
|
Pathogenic | - | Acute myeloid leukemia [Human Phenotype Ontology:HP:0001914,Human Phenotype Ontology:HP:0004808,Human Phenotype Ontology:HP:0004843,Human Phenotype Ontology:HP:0005516,Human Phenotype Ontology:HP:0006724,Human Phenotype Ontology:HP:0006728,MONDO:MONDO:0018874,MeSH:D015470,MedGen:C0023467,OMIM:601626,Orphanet:519] | |
241_SER | PHE | VAR_005969 |
rs28934573
|
LP/P | - | Li-Fraumeni syndrome (LFS) [MIM:151623] | |
241_SER | ALA | VAR_033036 |
rs1057520002
|
US | - | Sporadic cancers | |
241_SER | CYS | VAR_045217 |
rs28934573
|
US | - | Sporadic cancers | |
241_SER | PRO | VAR_045218 |
rs1057520002
|
US | - | Sporadic cancers | |
241_SER | TYR | VAR_045219 |
rs28934573
|
US | - | Sporadic cancers | |
241_SER | THR | VAR_047183 |
-
|
LP/P | - | Li-Fraumeni syndrome (LFS) [MIM:151623] | |
241_SER | PHE |
ClinVar chr17:7577559 |
rs28934573
|
Pathogenic/Likely pathogenic | - | Bone osteosarcoma|Hepatoblastoma|Hereditary cancer-predisposing syndrome|Squamous cell carcinoma of the skin|Carcinoma of esophagus|Breast neoplasm|Squamous cell carcinoma of the head and neck|Lung adenocarcinoma|Malignant melanoma of skin|Glioblastoma|Transitional cell carcinoma of the bladder|Non-Hodgkin lymphoma|Malignant neoplasm of body of uterus|Brainstem glioma|Neoplasm of the large intestine|Pancreatic adenocarcinoma|Ovarian serous cystadenocarcinoma|Papillary renal cell carcinoma type 1|Uterine carcinosarcoma|Papillary renal cell carcinoma, sporadic|Neoplasm of brain|Gallbladder carcinoma|Li-Fraumeni syndrome|Neoplasm of ovary|Lip and oral cavity carcinoma|Li-Fraumeni syndrome 1|12 conditions|not provided [MONDO:MONDO:0002629,MedGen:C0585442,OMIM:259500,Orphanet:668|Human Phenotype Ontology:HP:0002884,MONDO:MONDO:0018666,MedGen:C0206624,Orphanet:449|MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162|Human Phenotype Ontology:HP:0006739,Human Phenotype Ontology:HP:0007614,MONDO:MONDO:0002529,MedGen:C0553723|Human Phenotype Ontology:HP:0011459,MONDO:MONDO:0019086,MedGen:C0152018,Orphanet:70482|Human Phenotype Ontology:HP:0010623,Human Phenotype Ontology:HP:0100013,MONDO:MONDO:0021100,MeSH:D001943,MedGen:C1458155|MONDO:MONDO:0010150,MeSH:D000077195,MedGen:C1168401,OMIM:275355,Orphanet:67037|Human Phenotype Ontology:HP:0030078,MONDO:MONDO:0005061,MeSH:D000077192,MedGen:C0152013|Human Phenotype Ontology:HP:0012056,MONDO:MONDO:0005012,MeSH:C562393,MedGen:C0151779|MONDO:MONDO:0018177,MeSH:D005909,MedGen:C0017636,Orphanet:360|Human Phenotype Ontology:HP:0006740,MONDO:MONDO:0005611,MedGen:C0279680|Human Phenotype Ontology:HP:0012539,MONDO:MONDO:0018908,MedGen:C0024305,Orphanet:547|MedGen:C0153574|Human Phenotype Ontology:HP:0010796,MONDO:MONDO:0002911,MedGen:C0677865|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|Human Phenotype Ontology:HP:0006725,MONDO:MONDO:0006047,MedGen:C0281361|MONDO:MONDO:0006046,MedGen:C0279663|Human Phenotype Ontology:HP:0011797,MedGen:C1336839,OMIM:605074,Orphanet:47044|MONDO:MONDO:0006485,MedGen:C0280630|MeSH:C538614,MedGen:C1336078|Human Phenotype Ontology:HP:0030692,MONDO:MONDO:0021211,MeSH:D001932,MedGen:C0006118|MONDO:MONDO:0003220,MedGen:C0235782|MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524|Human Phenotype Ontology:HP:0100615,MONDO:MONDO:0021068,MeSH:D010051,MedGen:C0919267,OMIM:167000|MONDO:MONDO:0023644,MedGen:C0220641|Gene:553989,MedGen:C1835398,OMIM:151623,Orphanet:524|12 conditions|MedGen:C3661900] | |
241_SER | CYS |
ClinVar chr17:7577559 |
rs28934573
|
Pathogenic/Likely pathogenic | - | Li-Fraumeni syndrome|not provided|Glioblastoma|Papillary renal cell carcinoma type 1|Neoplasm of brain|Neoplasm of the large intestine|Lung adenocarcinoma|Non-Hodgkin lymphoma|Papillary renal cell carcinoma, sporadic|Breast neoplasm|Transitional cell carcinoma of the bladder|Squamous cell carcinoma of the head and neck|Squamous cell carcinoma of the skin|Gallbladder carcinoma|Uterine carcinosarcoma|Pancreatic adenocarcinoma|Malignant melanoma of skin|Ovarian serous cystadenocarcinoma|Brainstem glioma|Malignant neoplasm of body of uterus|Carcinoma of esophagus|Hereditary cancer-predisposing syndrome|Neoplasm of ovary|Li-Fraumeni syndrome 1 [MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524|MedGen:C3661900|MONDO:MONDO:0018177,MeSH:D005909,MedGen:C0017636,Orphanet:360|Human Phenotype Ontology:HP:0011797,MedGen:C1336839,OMIM:605074,Orphanet:47044|Human Phenotype Ontology:HP:0030692,MONDO:MONDO:0021211,MeSH:D001932,MedGen:C0006118|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|Human Phenotype Ontology:HP:0030078,MONDO:MONDO:0005061,MeSH:D000077192,MedGen:C0152013|Human Phenotype Ontology:HP:0012539,MONDO:MONDO:0018908,MedGen:C0024305,Orphanet:547|MeSH:C538614,MedGen:C1336078|Human Phenotype Ontology:HP:0010623,Human Phenotype Ontology:HP:0100013,MONDO:MONDO:0021100,MeSH:D001943,MedGen:C1458155|Human Phenotype Ontology:HP:0006740,MONDO:MONDO:0005611,MedGen:C0279680|MONDO:MONDO:0010150,MeSH:D000077195,MedGen:C1168401,OMIM:275355,Orphanet:67037|Human Phenotype Ontology:HP:0006739,Human Phenotype Ontology:HP:0007614,MONDO:MONDO:0002529,MedGen:C0553723|MONDO:MONDO:0003220,MedGen:C0235782|MONDO:MONDO:0006485,MedGen:C0280630|Human Phenotype Ontology:HP:0006725,MONDO:MONDO:0006047,MedGen:C0281361|Human Phenotype Ontology:HP:0012056,MONDO:MONDO:0005012,MeSH:C562393,MedGen:C0151779|MONDO:MONDO:0006046,MedGen:C0279663|Human Phenotype Ontology:HP:0010796,MONDO:MONDO:0002911,MedGen:C0677865|MedGen:C0153574|Human Phenotype Ontology:HP:0011459,MONDO:MONDO:0019086,MedGen:C0152018,Orphanet:70482|MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162|Human Phenotype Ontology:HP:0100615,MONDO:MONDO:0021068,MeSH:D010051,MedGen:C0919267,OMIM:167000|Gene:553989,MedGen:C1835398,OMIM:151623,Orphanet:524] | |
241_SER | TYR |
ClinVar chr17:7577559 |
rs28934573
|
Pathogenic | - | Carcinoma of esophagus|Glioblastoma|Uterine carcinosarcoma|Malignant neoplasm of body of uterus|Squamous cell carcinoma of the head and neck|Malignant melanoma of skin|Pancreatic adenocarcinoma|Squamous cell carcinoma of the skin|Neoplasm of brain|Non-Hodgkin lymphoma|Lung adenocarcinoma|Breast neoplasm|Ovarian serous cystadenocarcinoma|Papillary renal cell carcinoma, sporadic|Neoplasm of the large intestine|Brainstem glioma|Gallbladder carcinoma|Transitional cell carcinoma of the bladder|Papillary renal cell carcinoma type 1|Neoplasm of ovary|Li-Fraumeni syndrome|not provided|Hereditary cancer-predisposing syndrome|Li-Fraumeni syndrome 1 [Human Phenotype Ontology:HP:0011459,MONDO:MONDO:0019086,MedGen:C0152018,Orphanet:70482|MONDO:MONDO:0018177,MeSH:D005909,MedGen:C0017636,Orphanet:360|MONDO:MONDO:0006485,MedGen:C0280630|MedGen:C0153574|MONDO:MONDO:0010150,MeSH:D000077195,MedGen:C1168401,OMIM:275355,Orphanet:67037|Human Phenotype Ontology:HP:0012056,MONDO:MONDO:0005012,MeSH:C562393,MedGen:C0151779|Human Phenotype Ontology:HP:0006725,MONDO:MONDO:0006047,MedGen:C0281361|Human Phenotype Ontology:HP:0006739,Human Phenotype Ontology:HP:0007614,MONDO:MONDO:0002529,MedGen:C0553723|Human Phenotype Ontology:HP:0030692,MONDO:MONDO:0021211,MeSH:D001932,MedGen:C0006118|Human Phenotype Ontology:HP:0012539,MONDO:MONDO:0018908,MedGen:C0024305,Orphanet:547|Human Phenotype Ontology:HP:0030078,MONDO:MONDO:0005061,MeSH:D000077192,MedGen:C0152013|Human Phenotype Ontology:HP:0010623,Human Phenotype Ontology:HP:0100013,MONDO:MONDO:0021100,MeSH:D001943,MedGen:C1458155|MONDO:MONDO:0006046,MedGen:C0279663|MeSH:C538614,MedGen:C1336078|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|Human Phenotype Ontology:HP:0010796,MONDO:MONDO:0002911,MedGen:C0677865|MONDO:MONDO:0003220,MedGen:C0235782|Human Phenotype Ontology:HP:0006740,MONDO:MONDO:0005611,MedGen:C0279680|Human Phenotype Ontology:HP:0011797,MedGen:C1336839,OMIM:605074,Orphanet:47044|Human Phenotype Ontology:HP:0100615,MONDO:MONDO:0021068,MeSH:D010051,MedGen:C0919267,OMIM:167000|MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524|MedGen:C3661900|MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162|Gene:553989,MedGen:C1835398,OMIM:151623,Orphanet:524] | |
241_SER | ALA |
ClinVar chr17:7577560 |
rs1057520002
|
Pathogenic | - | Uterine carcinosarcoma|Carcinoma of esophagus|Neoplasm of the large intestine|Brainstem glioma|Neoplasm of brain|Gallbladder carcinoma|Malignant melanoma of skin|Non-Hodgkin lymphoma|Malignant neoplasm of body of uterus|Papillary renal cell carcinoma type 1|Ovarian serous cystadenocarcinoma|Breast neoplasm|Glioblastoma|Lung adenocarcinoma|Transitional cell carcinoma of the bladder|Squamous cell carcinoma of the head and neck|Pancreatic adenocarcinoma|Squamous cell carcinoma of the skin|Papillary renal cell carcinoma, sporadic|Li-Fraumeni syndrome|Hereditary cancer-predisposing syndrome [MONDO:MONDO:0006485,MedGen:C0280630|Human Phenotype Ontology:HP:0011459,MONDO:MONDO:0019086,MedGen:C0152018,Orphanet:70482|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|Human Phenotype Ontology:HP:0010796,MONDO:MONDO:0002911,MedGen:C0677865|Human Phenotype Ontology:HP:0030692,MONDO:MONDO:0021211,MeSH:D001932,MedGen:C0006118|MONDO:MONDO:0003220,MedGen:C0235782|Human Phenotype Ontology:HP:0012056,MONDO:MONDO:0005012,MeSH:C562393,MedGen:C0151779|Human Phenotype Ontology:HP:0012539,MONDO:MONDO:0018908,MedGen:C0024305,Orphanet:547|MedGen:C0153574|Human Phenotype Ontology:HP:0011797,MedGen:C1336839,OMIM:605074,Orphanet:47044|MONDO:MONDO:0006046,MedGen:C0279663|Human Phenotype Ontology:HP:0010623,Human Phenotype Ontology:HP:0100013,MONDO:MONDO:0021100,MeSH:D001943,MedGen:C1458155|MONDO:MONDO:0018177,MeSH:D005909,MedGen:C0017636,Orphanet:360|Human Phenotype Ontology:HP:0030078,MONDO:MONDO:0005061,MeSH:D000077192,MedGen:C0152013|Human Phenotype Ontology:HP:0006740,MONDO:MONDO:0005611,MedGen:C0279680|MONDO:MONDO:0010150,MeSH:D000077195,MedGen:C1168401,OMIM:275355,Orphanet:67037|Human Phenotype Ontology:HP:0006725,MONDO:MONDO:0006047,MedGen:C0281361|Human Phenotype Ontology:HP:0006739,Human Phenotype Ontology:HP:0007614,MONDO:MONDO:0002529,MedGen:C0553723|MeSH:C538614,MedGen:C1336078|MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524|MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162] | |
241_SER | THR |
ClinVar chr17:7577560 |
rs1057520002
|
Pathogenic | - | Li-Fraumeni syndrome [MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524] | |
242_CYS | PHE | VAR_005970 |
rs121912655
|
US | - | Sporadic cancers | |
242_CYS | GLY | VAR_045220 |
rs1057519982
|
US | - | Sporadic cancers | |
242_CYS | ARG | VAR_045221 |
-
|
US | - | Sporadic cancers | |
242_CYS | SER | VAR_045222 |
rs121912655
|
US | - | Sporadic cancers | |
242_CYS | TRP | VAR_045223 |
rs375874539
|
US | - | Sporadic cancers | |
242_CYS | TYR | VAR_045224 |
rs121912655
|
US | - | A familial cancer not matching LFS | |
242_CYS | TYR |
ClinVar chr17:7577556 |
rs121912655
|
Pathogenic | - | Li-fraumeni-like syndrome|Hereditary cancer-predisposing syndrome|Lung adenocarcinoma|Gastric adenocarcinoma|Li-Fraumeni syndrome|Transitional cell carcinoma of the bladder|Squamous cell carcinoma of the head and neck|Hepatocellular carcinoma|Squamous cell lung carcinoma|B-cell chronic lymphocytic leukemia|Glioblastoma|Uterine carcinosarcoma|Breast neoplasm|Carcinoma of esophagus|Neoplasm of ovary|Li-Fraumeni syndrome 1|Familial cancer of breast|not provided [MONDO:MONDO:0800290,MedGen:C2675080|MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162|Human Phenotype Ontology:HP:0030078,MONDO:MONDO:0005061,MeSH:D000077192,MedGen:C0152013|Human Phenotype Ontology:HP:0033770,MONDO:MONDO:0005036,MedGen:C0278701|MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524|Human Phenotype Ontology:HP:0006740,MONDO:MONDO:0005611,MedGen:C0279680|MONDO:MONDO:0010150,MeSH:D000077195,MedGen:C1168401,OMIM:275355,Orphanet:67037|Human Phenotype Ontology:HP:0001402,Human Phenotype Ontology:HP:0002899,Human Phenotype Ontology:HP:0003007,Human Phenotype Ontology:HP:0006750,MONDO:MONDO:0007256,MedGen:C2239176,OMIM:114550,Orphanet:88673|Human Phenotype Ontology:HP:0030359,MONDO:MONDO:0005097,MedGen:C0149782|Human Phenotype Ontology:HP:0005550,Human Phenotype Ontology:HP:0006734,Human Phenotype Ontology:HP:0006760,MONDO:MONDO:0004948,MeSH:D015451,MedGen:C0023434,OMIM:151400,Orphanet:67038|MONDO:MONDO:0018177,MeSH:D005909,MedGen:C0017636,Orphanet:360|MONDO:MONDO:0006485,MedGen:C0280630|Human Phenotype Ontology:HP:0010623,Human Phenotype Ontology:HP:0100013,MONDO:MONDO:0021100,MeSH:D001943,MedGen:C1458155|Human Phenotype Ontology:HP:0011459,MONDO:MONDO:0019086,MedGen:C0152018,Orphanet:70482|Human Phenotype Ontology:HP:0100615,MONDO:MONDO:0021068,MeSH:D010051,MedGen:C0919267,OMIM:167000|Gene:553989,MedGen:C1835398,OMIM:151623,Orphanet:524|MONDO:MONDO:0016419,MedGen:C0346153,OMIM:114480,Orphanet:227535|MedGen:C3661900] | |
242_CYS | TRP |
ClinVar chr17:7577555 |
rs375874539
|
Pathogenic | - | Squamous cell carcinoma of the head and neck|Glioblastoma|Hepatocellular carcinoma|Lung adenocarcinoma|Squamous cell lung carcinoma|Uterine carcinosarcoma|B-cell chronic lymphocytic leukemia|Carcinoma of esophagus|Transitional cell carcinoma of the bladder|Gastric adenocarcinoma|Breast neoplasm|Li-Fraumeni syndrome [MONDO:MONDO:0010150,MeSH:D000077195,MedGen:C1168401,OMIM:275355,Orphanet:67037|MONDO:MONDO:0018177,MeSH:D005909,MedGen:C0017636,Orphanet:360|Human Phenotype Ontology:HP:0001402,Human Phenotype Ontology:HP:0002899,Human Phenotype Ontology:HP:0003007,Human Phenotype Ontology:HP:0006750,MONDO:MONDO:0007256,MedGen:C2239176,OMIM:114550,Orphanet:88673|Human Phenotype Ontology:HP:0030078,MONDO:MONDO:0005061,MeSH:D000077192,MedGen:C0152013|Human Phenotype Ontology:HP:0030359,MONDO:MONDO:0005097,MedGen:C0149782|MONDO:MONDO:0006485,MedGen:C0280630|Human Phenotype Ontology:HP:0005550,Human Phenotype Ontology:HP:0006734,Human Phenotype Ontology:HP:0006760,MONDO:MONDO:0004948,MeSH:D015451,MedGen:C0023434,OMIM:151400,Orphanet:67038|Human Phenotype Ontology:HP:0011459,MONDO:MONDO:0019086,MedGen:C0152018,Orphanet:70482|Human Phenotype Ontology:HP:0006740,MONDO:MONDO:0005611,MedGen:C0279680|Human Phenotype Ontology:HP:0033770,MONDO:MONDO:0005036,MedGen:C0278701|Human Phenotype Ontology:HP:0010623,Human Phenotype Ontology:HP:0100013,MONDO:MONDO:0021100,MeSH:D001943,MedGen:C1458155|MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524] | |
242_CYS | TER |
ClinVar chr17:7577555 |
rs375874539
|
Pathogenic | - | Li-Fraumeni syndrome [MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524] | |
243_MET | ILE | VAR_045225 |
-
|
US | - | Sporadic cancers | |
243_MET | LYS | VAR_045226 |
-
|
US | - | Sporadic cancers | |
243_MET | LEU | VAR_045227 |
rs786203117
|
US | - | Sporadic cancers | |
243_MET | ARG | VAR_045228 |
-
|
US | - | Sporadic cancers | |
243_MET | THR | VAR_045229 |
rs730882006
|
US | - | Sporadic cancers | |
243_MET | VAL | VAR_045230 |
rs786203117
|
US | - | Sporadic cancers | |
244_GLY | CYS | VAR_045231 |
rs1057519989
|
US | - | Sporadic cancers | |
244_GLY | ASP | VAR_045232 |
rs1057517983
|
LP/P | - | Li-Fraumeni syndrome (LFS) [MIM:151623] | |
244_GLY | GLU | VAR_045233 |
-
|
US | - | A sporadic cancer | |
244_GLY | ARG | VAR_045234 |
rs1057519989
|
US | - | Sporadic cancers | |
244_GLY | SER | VAR_045235 |
rs1057519989
|
US | - | Sporadic cancers | |
244_GLY | VAL | VAR_045236 |
rs985033810
|
LP/P | - | Li-Fraumeni syndrome (LFS) [MIM:151623] | |
244_GLY | ALA | VAR_047186 |
rs985033810
|
US | - | Sporadic cancers | |
244_GLY | ASP |
ClinVar chr17:7577550 |
rs985033810
|
Pathogenic/Likely pathogenic | - | not provided|Neoplasm of the large intestine|Squamous cell lung carcinoma|Glioblastoma|Small cell lung carcinoma|Carcinoma of esophagus|Squamous cell carcinoma of the head and neck|Ovarian serous cystadenocarcinoma|Uterine carcinosarcoma|Lung adenocarcinoma|Gastric adenocarcinoma|Malignant neoplasm of body of uterus|Hepatocellular carcinoma|Neoplasm of brain|Li-Fraumeni syndrome|Neoplasm of ovary|Hereditary cancer-predisposing syndrome|Li-Fraumeni syndrome 1|Gastric cancer [MedGen:C3661900|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|Human Phenotype Ontology:HP:0030359,MONDO:MONDO:0005097,MedGen:C0149782|MONDO:MONDO:0018177,MeSH:D005909,MedGen:C0017636,Orphanet:360|Human Phenotype Ontology:HP:0030357,MONDO:MONDO:0008433,MeSH:D055752,MedGen:C0149925,OMIM:182280,Orphanet:70573|Human Phenotype Ontology:HP:0011459,MONDO:MONDO:0019086,MedGen:C0152018,Orphanet:70482|MONDO:MONDO:0010150,MeSH:D000077195,MedGen:C1168401,OMIM:275355,Orphanet:67037|MONDO:MONDO:0006046,MedGen:C0279663|MONDO:MONDO:0006485,MedGen:C0280630|Human Phenotype Ontology:HP:0030078,MONDO:MONDO:0005061,MeSH:D000077192,MedGen:C0152013|Human Phenotype Ontology:HP:0033770,MONDO:MONDO:0005036,MedGen:C0278701|MedGen:C0153574|Human Phenotype Ontology:HP:0001402,Human Phenotype Ontology:HP:0002899,Human Phenotype Ontology:HP:0003007,Human Phenotype Ontology:HP:0006750,MONDO:MONDO:0007256,MedGen:C2239176,OMIM:114550,Orphanet:88673|Human Phenotype Ontology:HP:0030692,MONDO:MONDO:0021211,MeSH:D001932,MedGen:C0006118|MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524|Human Phenotype Ontology:HP:0100615,MONDO:MONDO:0021068,MeSH:D010051,MedGen:C0919267,OMIM:167000|MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162|Gene:553989,MedGen:C1835398,OMIM:151623,Orphanet:524|Human Phenotype Ontology:HP:0012126,MONDO:MONDO:0001056,MeSH:D013274,MedGen:C0024623,OMIM:613659] | |
244_GLY | SER |
ClinVar chr17:7577551 |
rs1057519989
|
Pathogenic | - | Lung adenocarcinoma|Ovarian serous cystadenocarcinoma|Squamous cell lung carcinoma|Small cell lung carcinoma|Neoplasm of brain|Uterine carcinosarcoma|Carcinoma of esophagus|Hepatocellular carcinoma|Malignant neoplasm of body of uterus|Glioblastoma|Squamous cell carcinoma of the head and neck|Gastric adenocarcinoma|Neoplasm of the large intestine|Hereditary cancer-predisposing syndrome|Li-Fraumeni syndrome|Rhabdomyosarcoma|Li-Fraumeni syndrome 1|Gastric cancer|Malignant tumor of urinary bladder|Adrenocortical carcinoma, hereditary [Human Phenotype Ontology:HP:0030078,MONDO:MONDO:0005061,MeSH:D000077192,MedGen:C0152013|MONDO:MONDO:0006046,MedGen:C0279663|Human Phenotype Ontology:HP:0030359,MONDO:MONDO:0005097,MedGen:C0149782|Human Phenotype Ontology:HP:0030357,MONDO:MONDO:0008433,MeSH:D055752,MedGen:C0149925,OMIM:182280,Orphanet:70573|Human Phenotype Ontology:HP:0030692,MONDO:MONDO:0021211,MeSH:D001932,MedGen:C0006118|MONDO:MONDO:0006485,MedGen:C0280630|Human Phenotype Ontology:HP:0011459,MONDO:MONDO:0019086,MedGen:C0152018,Orphanet:70482|Human Phenotype Ontology:HP:0001402,Human Phenotype Ontology:HP:0002899,Human Phenotype Ontology:HP:0003007,Human Phenotype Ontology:HP:0006750,MONDO:MONDO:0007256,MedGen:C2239176,OMIM:114550,Orphanet:88673|MedGen:C0153574|MONDO:MONDO:0018177,MeSH:D005909,MedGen:C0017636,Orphanet:360|MONDO:MONDO:0010150,MeSH:D000077195,MedGen:C1168401,OMIM:275355,Orphanet:67037|Human Phenotype Ontology:HP:0033770,MONDO:MONDO:0005036,MedGen:C0278701|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162|MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524|Human Phenotype Ontology:HP:0002859,MONDO:MONDO:0005212,MeSH:D012208,MedGen:C0035412,Orphanet:780|Gene:553989,MedGen:C1835398,OMIM:151623,Orphanet:524|Human Phenotype Ontology:HP:0012126,MONDO:MONDO:0001056,MeSH:D013274,MedGen:C0024623,OMIM:613659|MONDO:MONDO:0001187,MedGen:C0005684,OMIM:109800,Orphanet:157980|MONDO:MONDO:0008734,MedGen:C1859972,OMIM:202300,Orphanet:1501] | |
244_GLY | VAL |
ClinVar chr17:7577550 |
rs985033810
|
Likely pathogenic | - | Neoplasm of brain|Hepatocellular carcinoma|Squamous cell lung carcinoma|Glioblastoma|Squamous cell carcinoma of the head and neck|Neoplasm of the large intestine|Gastric adenocarcinoma|Small cell lung carcinoma|Malignant neoplasm of body of uterus|Ovarian serous cystadenocarcinoma|Lung adenocarcinoma|Uterine carcinosarcoma|Carcinoma of esophagus|Neoplasm of ovary [Human Phenotype Ontology:HP:0030692,MONDO:MONDO:0021211,MeSH:D001932,MedGen:C0006118|Human Phenotype Ontology:HP:0001402,Human Phenotype Ontology:HP:0002899,Human Phenotype Ontology:HP:0003007,Human Phenotype Ontology:HP:0006750,MONDO:MONDO:0007256,MedGen:C2239176,OMIM:114550,Orphanet:88673|Human Phenotype Ontology:HP:0030359,MONDO:MONDO:0005097,MedGen:C0149782|MONDO:MONDO:0018177,MeSH:D005909,MedGen:C0017636,Orphanet:360|MONDO:MONDO:0010150,MeSH:D000077195,MedGen:C1168401,OMIM:275355,Orphanet:67037|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|Human Phenotype Ontology:HP:0033770,MONDO:MONDO:0005036,MedGen:C0278701|Human Phenotype Ontology:HP:0030357,MONDO:MONDO:0008433,MeSH:D055752,MedGen:C0149925,OMIM:182280,Orphanet:70573|MedGen:C0153574|MONDO:MONDO:0006046,MedGen:C0279663|Human Phenotype Ontology:HP:0030078,MONDO:MONDO:0005061,MeSH:D000077192,MedGen:C0152013|MONDO:MONDO:0006485,MedGen:C0280630|Human Phenotype Ontology:HP:0011459,MONDO:MONDO:0019086,MedGen:C0152018,Orphanet:70482|Human Phenotype Ontology:HP:0100615,MONDO:MONDO:0021068,MeSH:D010051,MedGen:C0919267,OMIM:167000] | |
244_GLY | ARG |
ClinVar chr17:7577551 |
rs1057519989
|
Likely pathogenic | - | Gastric adenocarcinoma|Glioblastoma|Neoplasm of brain|Neoplasm of the large intestine|Lung adenocarcinoma|Ovarian serous cystadenocarcinoma|Carcinoma of esophagus|Squamous cell carcinoma of the head and neck|Malignant neoplasm of body of uterus|Uterine carcinosarcoma|Squamous cell lung carcinoma|Hepatocellular carcinoma|Small cell lung carcinoma [Human Phenotype Ontology:HP:0033770,MONDO:MONDO:0005036,MedGen:C0278701|MONDO:MONDO:0018177,MeSH:D005909,MedGen:C0017636,Orphanet:360|Human Phenotype Ontology:HP:0030692,MONDO:MONDO:0021211,MeSH:D001932,MedGen:C0006118|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|Human Phenotype Ontology:HP:0030078,MONDO:MONDO:0005061,MeSH:D000077192,MedGen:C0152013|MONDO:MONDO:0006046,MedGen:C0279663|Human Phenotype Ontology:HP:0011459,MONDO:MONDO:0019086,MedGen:C0152018,Orphanet:70482|MONDO:MONDO:0010150,MeSH:D000077195,MedGen:C1168401,OMIM:275355,Orphanet:67037|MedGen:C0153574|MONDO:MONDO:0006485,MedGen:C0280630|Human Phenotype Ontology:HP:0030359,MONDO:MONDO:0005097,MedGen:C0149782|Human Phenotype Ontology:HP:0001402,Human Phenotype Ontology:HP:0002899,Human Phenotype Ontology:HP:0003007,Human Phenotype Ontology:HP:0006750,MONDO:MONDO:0007256,MedGen:C2239176,OMIM:114550,Orphanet:88673|Human Phenotype Ontology:HP:0030357,MONDO:MONDO:0008433,MeSH:D055752,MedGen:C0149925,OMIM:182280,Orphanet:70573] | |
244_GLY | ALA |
ClinVar chr17:7577550 |
rs985033810
|
Pathogenic | - | Li-Fraumeni syndrome|Lip and oral cavity carcinoma|Hereditary cancer-predisposing syndrome [MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524|MONDO:MONDO:0023644,MedGen:C0220641|MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162] | |
245_GLY | ALA | VAR_005971 |
rs121912656
|
US | - | Sporadic cancers | |
245_GLY | CYS | VAR_005972 |
rs28934575
|
LP/P | - | Li-Fraumeni syndrome (LFS) [MIM:151623] | |
245_GLY | ASP | VAR_005973 |
rs121912656
|
LP/P | - | Li-Fraumeni syndrome (LFS) [MIM:151623] | |
245_GLY | SER | VAR_005974 |
rs28934575
|
LP/P | - | Li-Fraumeni syndrome (LFS) [MIM:151623] | |
245_GLY | VAL | VAR_005975 |
rs121912656
|
LP/P | - | Li-Fraumeni syndrome (LFS) [MIM:151623] | |
245_GLY | GLU | VAR_045237 |
-
|
US | - | A sporadic cancer | |
245_GLY | ARG | VAR_045238 |
rs28934575
|
US | - | Sporadic cancers | |
245_GLY | PHE | VAR_045851 |
-
|
US | - | Sporadic cancers | |
245_GLY | HIS | VAR_045852 |
-
|
US | - | A sporadic cancer | |
245_GLY | LEU | VAR_045853 |
-
|
US | - | Sporadic cancers | |
245_GLY | ASN | VAR_045854 |
-
|
US | - | Sporadic cancers | |
245_GLY | CYS |
ClinVar chr17:7577548 |
rs28934575
|
Pathogenic | - | Li-Fraumeni syndrome 1|not provided|Breast neoplasm|Glioblastoma|Brainstem glioma|Pancreatic adenocarcinoma|Uterine carcinosarcoma|Lung adenocarcinoma|Neoplasm of brain|Transitional cell carcinoma of the bladder|Neoplasm of the large intestine|Ovarian serous cystadenocarcinoma|Prostate adenocarcinoma|Gastric adenocarcinoma|Squamous cell carcinoma of the head and neck|Carcinoma of esophagus|Hepatocellular carcinoma|Squamous cell lung carcinoma|Hereditary cancer-predisposing syndrome|Li-Fraumeni syndrome|Breast and/or ovarian cancer [Gene:553989,MedGen:C1835398,OMIM:151623,Orphanet:524|MedGen:C3661900|Human Phenotype Ontology:HP:0010623,Human Phenotype Ontology:HP:0100013,MONDO:MONDO:0021100,MeSH:D001943,MedGen:C1458155|MONDO:MONDO:0018177,MeSH:D005909,MedGen:C0017636,Orphanet:360|Human Phenotype Ontology:HP:0010796,MONDO:MONDO:0002911,MedGen:C0677865|Human Phenotype Ontology:HP:0006725,MONDO:MONDO:0006047,MedGen:C0281361|MONDO:MONDO:0006485,MedGen:C0280630|Human Phenotype Ontology:HP:0030078,MONDO:MONDO:0005061,MeSH:D000077192,MedGen:C0152013|Human Phenotype Ontology:HP:0030692,MONDO:MONDO:0021211,MeSH:D001932,MedGen:C0006118|Human Phenotype Ontology:HP:0006740,MONDO:MONDO:0005611,MedGen:C0279680|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|MONDO:MONDO:0006046,MedGen:C0279663|MONDO:MONDO:0005082,MedGen:C0007112|Human Phenotype Ontology:HP:0033770,MONDO:MONDO:0005036,MedGen:C0278701|MONDO:MONDO:0010150,MeSH:D000077195,MedGen:C1168401,OMIM:275355,Orphanet:67037|Human Phenotype Ontology:HP:0011459,MONDO:MONDO:0019086,MedGen:C0152018,Orphanet:70482|Human Phenotype Ontology:HP:0001402,Human Phenotype Ontology:HP:0002899,Human Phenotype Ontology:HP:0003007,Human Phenotype Ontology:HP:0006750,MONDO:MONDO:0007256,MedGen:C2239176,OMIM:114550,Orphanet:88673|Human Phenotype Ontology:HP:0030359,MONDO:MONDO:0005097,MedGen:C0149782|MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162|MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524|MedGen:CN221562] | |
245_GLY | ASP |
ClinVar chr17:7577547 |
rs121912656
|
Pathogenic/Likely pathogenic | - | Li-Fraumeni syndrome 1|Hereditary cancer-predisposing syndrome|Li-Fraumeni syndrome|Pancreatic adenocarcinoma|Prostate adenocarcinoma|Ovarian serous cystadenocarcinoma|Breast neoplasm|Glioblastoma|Brainstem glioma|Neoplasm of brain|Squamous cell carcinoma of the head and neck|Squamous cell lung carcinoma|Neoplasm of the large intestine|Lung adenocarcinoma|Gastric adenocarcinoma|Uterine carcinosarcoma|Hepatocellular carcinoma|Transitional cell carcinoma of the bladder|Carcinoma of esophagus|Neoplasm of ovary|not provided|Adrenocortical carcinoma, hereditary [Gene:553989,MedGen:C1835398,OMIM:151623,Orphanet:524|MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162|MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524|Human Phenotype Ontology:HP:0006725,MONDO:MONDO:0006047,MedGen:C0281361|MONDO:MONDO:0005082,MedGen:C0007112|MONDO:MONDO:0006046,MedGen:C0279663|Human Phenotype Ontology:HP:0010623,Human Phenotype Ontology:HP:0100013,MONDO:MONDO:0021100,MeSH:D001943,MedGen:C1458155|MONDO:MONDO:0018177,MeSH:D005909,MedGen:C0017636,Orphanet:360|Human Phenotype Ontology:HP:0010796,MONDO:MONDO:0002911,MedGen:C0677865|Human Phenotype Ontology:HP:0030692,MONDO:MONDO:0021211,MeSH:D001932,MedGen:C0006118|MONDO:MONDO:0010150,MeSH:D000077195,MedGen:C1168401,OMIM:275355,Orphanet:67037|Human Phenotype Ontology:HP:0030359,MONDO:MONDO:0005097,MedGen:C0149782|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|Human Phenotype Ontology:HP:0030078,MONDO:MONDO:0005061,MeSH:D000077192,MedGen:C0152013|Human Phenotype Ontology:HP:0033770,MONDO:MONDO:0005036,MedGen:C0278701|MONDO:MONDO:0006485,MedGen:C0280630|Human Phenotype Ontology:HP:0001402,Human Phenotype Ontology:HP:0002899,Human Phenotype Ontology:HP:0003007,Human Phenotype Ontology:HP:0006750,MONDO:MONDO:0007256,MedGen:C2239176,OMIM:114550,Orphanet:88673|Human Phenotype Ontology:HP:0006740,MONDO:MONDO:0005611,MedGen:C0279680|Human Phenotype Ontology:HP:0011459,MONDO:MONDO:0019086,MedGen:C0152018,Orphanet:70482|Human Phenotype Ontology:HP:0100615,MONDO:MONDO:0021068,MeSH:D010051,MedGen:C0919267,OMIM:167000|MedGen:C3661900|MONDO:MONDO:0008734,MedGen:C1859972,OMIM:202300,Orphanet:1501] | |
245_GLY | SER |
ClinVar chr17:7577548 |
rs28934575
|
Pathogenic | - | Li-fraumeni-like syndrome|Li-Fraumeni syndrome 1|Hereditary cancer-predisposing syndrome|Adenocarcinoma|not provided|Li-Fraumeni syndrome|Squamous cell lung carcinoma|Prostate adenocarcinoma|Lung adenocarcinoma|Neoplasm of brain|Squamous cell carcinoma of the head and neck|Glioblastoma|Gastric adenocarcinoma|Pancreatic adenocarcinoma|Uterine carcinosarcoma|Transitional cell carcinoma of the bladder|Neoplasm|Carcinoma of esophagus|Ovarian serous cystadenocarcinoma|Breast neoplasm|Brainstem glioma|Hepatocellular carcinoma|Neoplasm of the large intestine|Astrocytoma, anaplastic|Atypical teratoid rhabdoid tumor|Neoplasm of ovary|Colorectal cancer|Familial ovarian cancer|Breast carcinoma|12 conditions|Gastric cancer|Malignant tumor of urinary bladder|Adrenocortical carcinoma, hereditary [MONDO:MONDO:0800290,MedGen:C2675080|Gene:553989,MedGen:C1835398,OMIM:151623,Orphanet:524|MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162|MONDO:MONDO:0004970,MedGen:C0001418|MedGen:C3661900|MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524|Human Phenotype Ontology:HP:0030359,MONDO:MONDO:0005097,MedGen:C0149782|MONDO:MONDO:0005082,MedGen:C0007112|Human Phenotype Ontology:HP:0030078,MONDO:MONDO:0005061,MeSH:D000077192,MedGen:C0152013|Human Phenotype Ontology:HP:0030692,MONDO:MONDO:0021211,MeSH:D001932,MedGen:C0006118|MONDO:MONDO:0010150,MeSH:D000077195,MedGen:C1168401,OMIM:275355,Orphanet:67037|MONDO:MONDO:0018177,MeSH:D005909,MedGen:C0017636,Orphanet:360|Human Phenotype Ontology:HP:0033770,MONDO:MONDO:0005036,MedGen:C0278701|Human Phenotype Ontology:HP:0006725,MONDO:MONDO:0006047,MedGen:C0281361|MONDO:MONDO:0006485,MedGen:C0280630|Human Phenotype Ontology:HP:0006740,MONDO:MONDO:0005611,MedGen:C0279680|Human Phenotype Ontology:HP:0002664,Human Phenotype Ontology:HP:0003008,Human Phenotype Ontology:HP:0006741,MONDO:MONDO:0005070,MeSH:D009369,MedGen:C0027651|Human Phenotype Ontology:HP:0011459,MONDO:MONDO:0019086,MedGen:C0152018,Orphanet:70482|MONDO:MONDO:0006046,MedGen:C0279663|Human Phenotype Ontology:HP:0010623,Human Phenotype Ontology:HP:0100013,MONDO:MONDO:0021100,MeSH:D001943,MedGen:C1458155|Human Phenotype Ontology:HP:0010796,MONDO:MONDO:0002911,MedGen:C0677865|Human Phenotype Ontology:HP:0001402,Human Phenotype Ontology:HP:0002899,Human Phenotype Ontology:HP:0003007,Human Phenotype Ontology:HP:0006750,MONDO:MONDO:0007256,MedGen:C2239176,OMIM:114550,Orphanet:88673|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|MONDO:MONDO:0016684,MedGen:C0334579,Orphanet:251589|Human Phenotype Ontology:HP:0034401,MONDO:MONDO:0020560,MedGen:C1266184,Orphanet:99966|Human Phenotype Ontology:HP:0100615,MONDO:MONDO:0021068,MeSH:D010051,MedGen:C0919267,OMIM:167000|MONDO:MONDO:0005575,MedGen:C0346629,OMIM:114500|MONDO:MONDO:0016248,MedGen:C5679802,Orphanet:213517|Human Phenotype Ontology:HP:0003002,MONDO:MONDO:0004989,MedGen:C0678222|12 conditions|Human Phenotype Ontology:HP:0012126,MONDO:MONDO:0001056,MeSH:D013274,MedGen:C0024623,OMIM:613659|MONDO:MONDO:0001187,MedGen:C0005684,OMIM:109800,Orphanet:157980|MONDO:MONDO:0008734,MedGen:C1859972,OMIM:202300,Orphanet:1501] | |
245_GLY | VAL |
ClinVar chr17:7577547 |
rs121912656
|
Pathogenic | - | Squamous cell carcinoma of the head and neck|Gastric adenocarcinoma|Ovarian serous cystadenocarcinoma|Neoplasm of brain|Transitional cell carcinoma of the bladder|Neoplasm of the large intestine|Glioblastoma|Pancreatic adenocarcinoma|Uterine carcinosarcoma|Hepatocellular carcinoma|Carcinoma of esophagus|Prostate adenocarcinoma|Lung adenocarcinoma|Breast neoplasm|Squamous cell lung carcinoma|Brainstem glioma|Li-Fraumeni syndrome|Hereditary cancer-predisposing syndrome|not provided|Li-Fraumeni syndrome 1|Adrenocortical carcinoma, hereditary [MONDO:MONDO:0010150,MeSH:D000077195,MedGen:C1168401,OMIM:275355,Orphanet:67037|Human Phenotype Ontology:HP:0033770,MONDO:MONDO:0005036,MedGen:C0278701|MONDO:MONDO:0006046,MedGen:C0279663|Human Phenotype Ontology:HP:0030692,MONDO:MONDO:0021211,MeSH:D001932,MedGen:C0006118|Human Phenotype Ontology:HP:0006740,MONDO:MONDO:0005611,MedGen:C0279680|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|MONDO:MONDO:0018177,MeSH:D005909,MedGen:C0017636,Orphanet:360|Human Phenotype Ontology:HP:0006725,MONDO:MONDO:0006047,MedGen:C0281361|MONDO:MONDO:0006485,MedGen:C0280630|Human Phenotype Ontology:HP:0001402,Human Phenotype Ontology:HP:0002899,Human Phenotype Ontology:HP:0003007,Human Phenotype Ontology:HP:0006750,MONDO:MONDO:0007256,MedGen:C2239176,OMIM:114550,Orphanet:88673|Human Phenotype Ontology:HP:0011459,MONDO:MONDO:0019086,MedGen:C0152018,Orphanet:70482|MONDO:MONDO:0005082,MedGen:C0007112|Human Phenotype Ontology:HP:0030078,MONDO:MONDO:0005061,MeSH:D000077192,MedGen:C0152013|Human Phenotype Ontology:HP:0010623,Human Phenotype Ontology:HP:0100013,MONDO:MONDO:0021100,MeSH:D001943,MedGen:C1458155|Human Phenotype Ontology:HP:0030359,MONDO:MONDO:0005097,MedGen:C0149782|Human Phenotype Ontology:HP:0010796,MONDO:MONDO:0002911,MedGen:C0677865|MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524|MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162|MedGen:C3661900|Gene:553989,MedGen:C1835398,OMIM:151623,Orphanet:524|MONDO:MONDO:0008734,MedGen:C1859972,OMIM:202300,Orphanet:1501] | |
246_MET | ARG | VAR_005976 |
rs587780074
|
US | - | Sporadic cancers | |
246_MET | THR | VAR_005977 |
rs587780074
|
US | - | Sporadic cancers | |
246_MET | VAL | VAR_005978 |
rs483352695
|
LP/P | - | Li-Fraumeni syndrome (LFS) [MIM:151623] | |
246_MET | LEU | VAR_044020 |
rs483352695
|
US | - | Sporadic cancers | |
246_MET | ILE | VAR_045239 |
rs1019340046
|
US | - | Sporadic cancers | |
246_MET | LYS | VAR_045240 |
-
|
US | - | Sporadic cancers | |
246_MET | VAL |
ClinVar chr17:7577545 |
rs483352695
|
Pathogenic | - | not provided|Hereditary cancer-predisposing syndrome|Li-Fraumeni syndrome|Neoplasm of ovary|Li-Fraumeni syndrome 1 [MedGen:C3661900|MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162|MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524|Human Phenotype Ontology:HP:0100615,MONDO:MONDO:0021068,MeSH:D010051,MedGen:C0919267,OMIM:167000|Gene:553989,MedGen:C1835398,OMIM:151623,Orphanet:524] | |
246_MET | LYS |
ClinVar chr17:7577544 |
rs587780074
|
Likely pathogenic | - | Hereditary cancer-predisposing syndrome|Li-Fraumeni syndrome|Li-Fraumeni syndrome 1 [MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162|MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524|Gene:553989,MedGen:C1835398,OMIM:151623,Orphanet:524] | |
246_MET | ILE |
ClinVar chr17:7577543 |
rs1019340046
|
Pathogenic/Likely pathogenic | - | Hereditary cancer-predisposing syndrome|Li-Fraumeni syndrome|Hereditary breast ovarian cancer syndrome [MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162|MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524|MONDO:MONDO:0003582,MeSH:D061325,MedGen:C0677776,Orphanet:145] | |
246_MET | ILE |
ClinVar chr17:7577543 |
-
|
Likely pathogenic | - | Hereditary cancer-predisposing syndrome [MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162] | |
247_ASN | ILE | VAR_005980 |
rs786201762
|
US | - | Sporadic cancers | |
247_ASN | ASP | VAR_045241 |
rs1452189221
|
US | - | Sporadic cancers | |
247_ASN | LYS | VAR_045242 |
-
|
US | - | Sporadic cancers | |
247_ASN | SER | VAR_045243 |
rs786201762
|
US | - | Sporadic cancers | |
247_ASN | TYR | VAR_045244 |
-
|
US | - | Sporadic cancers | |
247_ASN | PHE | VAR_045855 |
-
|
US | - | A sporadic cancer | |
247_ASN | THR | VAR_047189 |
-
|
US | - | Sporadic cancers | |
248_ARG | GLY | VAR_005981 |
rs121912651
|
US | - | Sporadic cancers | |
248_ARG | LEU | VAR_005982 |
rs11540652
|
US | - | Sporadic cancers | |
248_ARG | GLN | VAR_005983 |
rs11540652
|
LP/P | - | Li-Fraumeni syndrome (LFS) [MIM:151623] | |
248_ARG | TRP | VAR_005984 |
rs121912651
|
LP/P | - | Li-Fraumeni syndrome (LFS) [MIM:151623] | |
248_ARG | CYS | VAR_045245 |
-
|
US | - | A sporadic cancer | |
248_ARG | PRO | VAR_045246 |
rs11540652
|
US | - | Sporadic cancers | |
248_ARG | TRP |
ClinVar chr17:7577539 |
rs121912651
|
Pathogenic | - | Li-Fraumeni syndrome 1|Hereditary cancer-predisposing syndrome|Li-Fraumeni syndrome|not provided|Acute myeloid leukemia|Small cell lung carcinoma|Lung adenocarcinoma|Glioblastoma|Squamous cell carcinoma of the head and neck|B-cell chronic lymphocytic leukemia|Prostate adenocarcinoma|Breast neoplasm|Carcinoma of esophagus|Multiple myeloma|Uterine carcinosarcoma|Gastric adenocarcinoma|Neoplasm of brain|Hepatocellular carcinoma|Transitional cell carcinoma of the bladder|Neoplasm of the large intestine|Malignant neoplasm of body of uterus|Squamous cell carcinoma of the skin|Brainstem glioma|Malignant melanoma of skin|Ovarian serous cystadenocarcinoma|Myelodysplastic syndrome|Medulloblastoma|Pancreatic adenocarcinoma|Squamous cell lung carcinoma|Neoplasm|7 conditions|Neoplasm of ovary|Choroid plexus carcinoma|Gallbladder cancer|Lip and oral cavity carcinoma|Congenital fibrosarcoma|Gastric cancer|Breast and/or ovarian cancer|Malignant lymphoma, large B-cell, diffuse|Adrenocortical carcinoma, hereditary [Gene:553989,MedGen:C1835398,OMIM:151623,Orphanet:524|MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162|MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524|MedGen:C3661900|Human Phenotype Ontology:HP:0001914,Human Phenotype Ontology:HP:0004808,Human Phenotype Ontology:HP:0004843,Human Phenotype Ontology:HP:0005516,Human Phenotype Ontology:HP:0006724,Human Phenotype Ontology:HP:0006728,MONDO:MONDO:0018874,MeSH:D015470,MedGen:C0023467,OMIM:601626,Orphanet:519|Human Phenotype Ontology:HP:0030357,MONDO:MONDO:0008433,MeSH:D055752,MedGen:C0149925,OMIM:182280,Orphanet:70573|Human Phenotype Ontology:HP:0030078,MONDO:MONDO:0005061,MeSH:D000077192,MedGen:C0152013|MONDO:MONDO:0018177,MeSH:D005909,MedGen:C0017636,Orphanet:360|MONDO:MONDO:0010150,MeSH:D000077195,MedGen:C1168401,OMIM:275355,Orphanet:67037|Human Phenotype Ontology:HP:0005550,Human Phenotype Ontology:HP:0006734,Human Phenotype Ontology:HP:0006760,MONDO:MONDO:0004948,MeSH:D015451,MedGen:C0023434,OMIM:151400,Orphanet:67038|MONDO:MONDO:0005082,MedGen:C0007112|Human Phenotype Ontology:HP:0010623,Human Phenotype Ontology:HP:0100013,MONDO:MONDO:0021100,MeSH:D001943,MedGen:C1458155|Human Phenotype Ontology:HP:0011459,MONDO:MONDO:0019086,MedGen:C0152018,Orphanet:70482|Human Phenotype Ontology:HP:0006775,MONDO:MONDO:0009693,MeSH:D009101,MedGen:C0026764,OMIM:254500,Orphanet:29073,Orphanet:85443|MONDO:MONDO:0006485,MedGen:C0280630|Human Phenotype Ontology:HP:0033770,MONDO:MONDO:0005036,MedGen:C0278701|Human Phenotype Ontology:HP:0030692,MONDO:MONDO:0021211,MeSH:D001932,MedGen:C0006118|Human Phenotype Ontology:HP:0001402,Human Phenotype Ontology:HP:0002899,Human Phenotype Ontology:HP:0003007,Human Phenotype Ontology:HP:0006750,MONDO:MONDO:0007256,MedGen:C2239176,OMIM:114550,Orphanet:88673|Human Phenotype Ontology:HP:0006740,MONDO:MONDO:0005611,MedGen:C0279680|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|MedGen:C0153574|Human Phenotype Ontology:HP:0006739,Human Phenotype Ontology:HP:0007614,MONDO:MONDO:0002529,MedGen:C0553723|Human Phenotype Ontology:HP:0010796,MONDO:MONDO:0002911,MedGen:C0677865|Human Phenotype Ontology:HP:0012056,MONDO:MONDO:0005012,MeSH:C562393,MedGen:C0151779|MONDO:MONDO:0006046,MedGen:C0279663|MONDO:MONDO:0018881,MeSH:D009190,MedGen:C3463824,OMIM:614286,Orphanet:52688|Human Phenotype Ontology:HP:0002885,MONDO:MONDO:0007959,MeSH:D008527,MedGen:C0025149,OMIM:155255,Orphanet:616|Human Phenotype Ontology:HP:0006725,MONDO:MONDO:0006047,MedGen:C0281361|Human Phenotype Ontology:HP:0030359,MONDO:MONDO:0005097,MedGen:C0149782|Human Phenotype Ontology:HP:0002664,Human Phenotype Ontology:HP:0003008,Human Phenotype Ontology:HP:0006741,MONDO:MONDO:0005070,MeSH:D009369,MedGen:C0027651|7 conditions|Human Phenotype Ontology:HP:0100615,MONDO:MONDO:0021068,MeSH:D010051,MedGen:C0919267,OMIM:167000|Human Phenotype Ontology:HP:0030392,MONDO:MONDO:0016718,MedGen:C0431109,Orphanet:251899|MONDO:MONDO:0005411,MedGen:C0153452|MONDO:MONDO:0023644,MedGen:C0220641|MONDO:MONDO:0004557,MedGen:C0334459|Human Phenotype Ontology:HP:0012126,MONDO:MONDO:0001056,MeSH:D013274,MedGen:C0024623,OMIM:613659|MedGen:CN221562|MONDO:MONDO:0018905,MeSH:D016403,MedGen:C0079744,Orphanet:544|MONDO:MONDO:0008734,MedGen:C1859972,OMIM:202300,Orphanet:1501] | |
248_ARG | GLN |
ClinVar chr17:7577538 |
rs11540652
|
Pathogenic | - | Li-Fraumeni syndrome 1|Hereditary cancer-predisposing syndrome|Sarcoma|Li-Fraumeni syndrome|not provided|Acute myeloid leukemia|Breast neoplasm|Small cell lung carcinoma|Neoplasm|Neoplasm of the large intestine|Multiple myeloma|Malignant melanoma of skin|Ovarian serous cystadenocarcinoma|Brainstem glioma|Medulloblastoma|Malignant neoplasm of body of uterus|Uterine carcinosarcoma|Neoplasm of brain|Prostate adenocarcinoma|Gastric adenocarcinoma|Myelodysplastic syndrome|Squamous cell carcinoma of the skin|Squamous cell carcinoma of the head and neck|Transitional cell carcinoma of the bladder|B-cell chronic lymphocytic leukemia|Carcinoma of esophagus|Hepatocellular carcinoma|Pancreatic adenocarcinoma|Squamous cell lung carcinoma|Glioblastoma|Lung adenocarcinoma|11 conditions|Neoplasm of ovary|Lymphoma|Familial cancer of breast|Breast carcinoma|Lip and oral cavity carcinoma|Rhabdomyosarcoma|Ductal carcinoma in situ|Colorectal cancer|Gastric cancer|Malignant tumor of urinary bladder|Adrenocortical carcinoma, hereditary [Gene:553989,MedGen:C1835398,OMIM:151623,Orphanet:524|MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162|Human Phenotype Ontology:HP:0100242,MONDO:MONDO:0005089,MedGen:C1261473|MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524|MedGen:C3661900|Human Phenotype Ontology:HP:0001914,Human Phenotype Ontology:HP:0004808,Human Phenotype Ontology:HP:0004843,Human Phenotype Ontology:HP:0005516,Human Phenotype Ontology:HP:0006724,Human Phenotype Ontology:HP:0006728,MONDO:MONDO:0018874,MeSH:D015470,MedGen:C0023467,OMIM:601626,Orphanet:519|Human Phenotype Ontology:HP:0010623,Human Phenotype Ontology:HP:0100013,MONDO:MONDO:0021100,MeSH:D001943,MedGen:C1458155|Human Phenotype Ontology:HP:0030357,MONDO:MONDO:0008433,MeSH:D055752,MedGen:C0149925,OMIM:182280,Orphanet:70573|Human Phenotype Ontology:HP:0002664,Human Phenotype Ontology:HP:0003008,Human Phenotype Ontology:HP:0006741,MONDO:MONDO:0005070,MeSH:D009369,MedGen:C0027651|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|Human Phenotype Ontology:HP:0006775,MONDO:MONDO:0009693,MeSH:D009101,MedGen:C0026764,OMIM:254500,Orphanet:29073,Orphanet:85443|Human Phenotype Ontology:HP:0012056,MONDO:MONDO:0005012,MeSH:C562393,MedGen:C0151779|MONDO:MONDO:0006046,MedGen:C0279663|Human Phenotype Ontology:HP:0010796,MONDO:MONDO:0002911,MedGen:C0677865|Human Phenotype Ontology:HP:0002885,MONDO:MONDO:0007959,MeSH:D008527,MedGen:C0025149,OMIM:155255,Orphanet:616|MedGen:C0153574|MONDO:MONDO:0006485,MedGen:C0280630|Human Phenotype Ontology:HP:0030692,MONDO:MONDO:0021211,MeSH:D001932,MedGen:C0006118|MONDO:MONDO:0005082,MedGen:C0007112|Human Phenotype Ontology:HP:0033770,MONDO:MONDO:0005036,MedGen:C0278701|MONDO:MONDO:0018881,MeSH:D009190,MedGen:C3463824,OMIM:614286,Orphanet:52688|Human Phenotype Ontology:HP:0006739,Human Phenotype Ontology:HP:0007614,MONDO:MONDO:0002529,MedGen:C0553723|MONDO:MONDO:0010150,MeSH:D000077195,MedGen:C1168401,OMIM:275355,Orphanet:67037|Human Phenotype Ontology:HP:0006740,MONDO:MONDO:0005611,MedGen:C0279680|Human Phenotype Ontology:HP:0005550,Human Phenotype Ontology:HP:0006734,Human Phenotype Ontology:HP:0006760,MONDO:MONDO:0004948,MeSH:D015451,MedGen:C0023434,OMIM:151400,Orphanet:67038|Human Phenotype Ontology:HP:0011459,MONDO:MONDO:0019086,MedGen:C0152018,Orphanet:70482|Human Phenotype Ontology:HP:0001402,Human Phenotype Ontology:HP:0002899,Human Phenotype Ontology:HP:0003007,Human Phenotype Ontology:HP:0006750,MONDO:MONDO:0007256,MedGen:C2239176,OMIM:114550,Orphanet:88673|Human Phenotype Ontology:HP:0006725,MONDO:MONDO:0006047,MedGen:C0281361|Human Phenotype Ontology:HP:0030359,MONDO:MONDO:0005097,MedGen:C0149782|MONDO:MONDO:0018177,MeSH:D005909,MedGen:C0017636,Orphanet:360|Human Phenotype Ontology:HP:0030078,MONDO:MONDO:0005061,MeSH:D000077192,MedGen:C0152013|11 conditions|Human Phenotype Ontology:HP:0100615,MONDO:MONDO:0021068,MeSH:D010051,MedGen:C0919267,OMIM:167000|Human Phenotype Ontology:HP:0002665,MONDO:MONDO:0005062,MeSH:D008223,MedGen:C0024299,Orphanet:223735|MONDO:MONDO:0016419,MedGen:C0346153,OMIM:114480,Orphanet:227535|Human Phenotype Ontology:HP:0003002,MONDO:MONDO:0004989,MedGen:C0678222|MONDO:MONDO:0023644,MedGen:C0220641|Human Phenotype Ontology:HP:0002859,MONDO:MONDO:0005212,MeSH:D012208,MedGen:C0035412,Orphanet:780|Human Phenotype Ontology:HP:0030075,MONDO:MONDO:0005023,MedGen:C0007124|MONDO:MONDO:0005575,MedGen:C0346629,OMIM:114500|Human Phenotype Ontology:HP:0012126,MONDO:MONDO:0001056,MeSH:D013274,MedGen:C0024623,OMIM:613659|MONDO:MONDO:0001187,MedGen:C0005684,OMIM:109800,Orphanet:157980|MONDO:MONDO:0008734,MedGen:C1859972,OMIM:202300,Orphanet:1501] | |
248_ARG | LEU |
ClinVar chr17:7577538 |
rs11540652
|
Pathogenic | - | Hereditary cancer-predisposing syndrome|Brainstem glioma|Pancreatic adenocarcinoma|B-cell chronic lymphocytic leukemia|Uterine carcinosarcoma|Transitional cell carcinoma of the bladder|Ovarian serous cystadenocarcinoma|Hepatocellular carcinoma|Medulloblastoma|Myelodysplastic syndrome|Glioblastoma|Gastric adenocarcinoma|Squamous cell carcinoma of the skin|Breast neoplasm|Prostate adenocarcinoma|Neoplasm of brain|Squamous cell lung carcinoma|Acute myeloid leukemia|Multiple myeloma|Squamous cell carcinoma of the head and neck|Lung adenocarcinoma|Small cell lung carcinoma|Carcinoma of esophagus|Neoplasm of the large intestine|Malignant melanoma of skin|Malignant neoplasm of body of uterus|Li-Fraumeni syndrome|Adrenocortical carcinoma, hereditary [MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162|Human Phenotype Ontology:HP:0010796,MONDO:MONDO:0002911,MedGen:C0677865|Human Phenotype Ontology:HP:0006725,MONDO:MONDO:0006047,MedGen:C0281361|Human Phenotype Ontology:HP:0005550,Human Phenotype Ontology:HP:0006734,Human Phenotype Ontology:HP:0006760,MONDO:MONDO:0004948,MeSH:D015451,MedGen:C0023434,OMIM:151400,Orphanet:67038|MONDO:MONDO:0006485,MedGen:C0280630|Human Phenotype Ontology:HP:0006740,MONDO:MONDO:0005611,MedGen:C0279680|MONDO:MONDO:0006046,MedGen:C0279663|Human Phenotype Ontology:HP:0001402,Human Phenotype Ontology:HP:0002899,Human Phenotype Ontology:HP:0003007,Human Phenotype Ontology:HP:0006750,MONDO:MONDO:0007256,MedGen:C2239176,OMIM:114550,Orphanet:88673|Human Phenotype Ontology:HP:0002885,MONDO:MONDO:0007959,MeSH:D008527,MedGen:C0025149,OMIM:155255,Orphanet:616|MONDO:MONDO:0018881,MeSH:D009190,MedGen:C3463824,OMIM:614286,Orphanet:52688|MONDO:MONDO:0018177,MeSH:D005909,MedGen:C0017636,Orphanet:360|Human Phenotype Ontology:HP:0033770,MONDO:MONDO:0005036,MedGen:C0278701|Human Phenotype Ontology:HP:0006739,Human Phenotype Ontology:HP:0007614,MONDO:MONDO:0002529,MedGen:C0553723|Human Phenotype Ontology:HP:0010623,Human Phenotype Ontology:HP:0100013,MONDO:MONDO:0021100,MeSH:D001943,MedGen:C1458155|MONDO:MONDO:0005082,MedGen:C0007112|Human Phenotype Ontology:HP:0030692,MONDO:MONDO:0021211,MeSH:D001932,MedGen:C0006118|Human Phenotype Ontology:HP:0030359,MONDO:MONDO:0005097,MedGen:C0149782|Human Phenotype Ontology:HP:0001914,Human Phenotype Ontology:HP:0004808,Human Phenotype Ontology:HP:0004843,Human Phenotype Ontology:HP:0005516,Human Phenotype Ontology:HP:0006724,Human Phenotype Ontology:HP:0006728,MONDO:MONDO:0018874,MeSH:D015470,MedGen:C0023467,OMIM:601626,Orphanet:519|Human Phenotype Ontology:HP:0006775,MONDO:MONDO:0009693,MeSH:D009101,MedGen:C0026764,OMIM:254500,Orphanet:29073,Orphanet:85443|MONDO:MONDO:0010150,MeSH:D000077195,MedGen:C1168401,OMIM:275355,Orphanet:67037|Human Phenotype Ontology:HP:0030078,MONDO:MONDO:0005061,MeSH:D000077192,MedGen:C0152013|Human Phenotype Ontology:HP:0030357,MONDO:MONDO:0008433,MeSH:D055752,MedGen:C0149925,OMIM:182280,Orphanet:70573|Human Phenotype Ontology:HP:0011459,MONDO:MONDO:0019086,MedGen:C0152018,Orphanet:70482|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|Human Phenotype Ontology:HP:0012056,MONDO:MONDO:0005012,MeSH:C562393,MedGen:C0151779|MedGen:C0153574|MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524|MONDO:MONDO:0008734,MedGen:C1859972,OMIM:202300,Orphanet:1501] | |
248_ARG | PRO |
ClinVar chr17:7577538 |
rs11540652
|
Pathogenic/Likely pathogenic | - | Li-Fraumeni syndrome|Malignant neoplasm of body of uterus|Malignant melanoma of skin|Uterine carcinosarcoma|Glioblastoma|Squamous cell carcinoma of the head and neck|Neoplasm of the large intestine|Gastric adenocarcinoma|Medulloblastoma|Myelodysplastic syndrome|Prostate adenocarcinoma|B-cell chronic lymphocytic leukemia|Pancreatic adenocarcinoma|Brainstem glioma|Breast neoplasm|Carcinoma of esophagus|Transitional cell carcinoma of the bladder|Hepatocellular carcinoma|Ovarian serous cystadenocarcinoma|Multiple myeloma|Neoplasm of brain|Squamous cell lung carcinoma|Squamous cell carcinoma of the skin|Acute myeloid leukemia|Lung adenocarcinoma|Small cell lung carcinoma|Hereditary cancer-predisposing syndrome [MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524|MedGen:C0153574|Human Phenotype Ontology:HP:0012056,MONDO:MONDO:0005012,MeSH:C562393,MedGen:C0151779|MONDO:MONDO:0006485,MedGen:C0280630|MONDO:MONDO:0018177,MeSH:D005909,MedGen:C0017636,Orphanet:360|MONDO:MONDO:0010150,MeSH:D000077195,MedGen:C1168401,OMIM:275355,Orphanet:67037|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|Human Phenotype Ontology:HP:0033770,MONDO:MONDO:0005036,MedGen:C0278701|Human Phenotype Ontology:HP:0002885,MONDO:MONDO:0007959,MeSH:D008527,MedGen:C0025149,OMIM:155255,Orphanet:616|MONDO:MONDO:0018881,MeSH:D009190,MedGen:C3463824,OMIM:614286,Orphanet:52688|MONDO:MONDO:0005082,MedGen:C0007112|Human Phenotype Ontology:HP:0005550,Human Phenotype Ontology:HP:0006734,Human Phenotype Ontology:HP:0006760,MONDO:MONDO:0004948,MeSH:D015451,MedGen:C0023434,OMIM:151400,Orphanet:67038|Human Phenotype Ontology:HP:0006725,MONDO:MONDO:0006047,MedGen:C0281361|Human Phenotype Ontology:HP:0010796,MONDO:MONDO:0002911,MedGen:C0677865|Human Phenotype Ontology:HP:0010623,Human Phenotype Ontology:HP:0100013,MONDO:MONDO:0021100,MeSH:D001943,MedGen:C1458155|Human Phenotype Ontology:HP:0011459,MONDO:MONDO:0019086,MedGen:C0152018,Orphanet:70482|Human Phenotype Ontology:HP:0006740,MONDO:MONDO:0005611,MedGen:C0279680|Human Phenotype Ontology:HP:0001402,Human Phenotype Ontology:HP:0002899,Human Phenotype Ontology:HP:0003007,Human Phenotype Ontology:HP:0006750,MONDO:MONDO:0007256,MedGen:C2239176,OMIM:114550,Orphanet:88673|MONDO:MONDO:0006046,MedGen:C0279663|Human Phenotype Ontology:HP:0006775,MONDO:MONDO:0009693,MeSH:D009101,MedGen:C0026764,OMIM:254500,Orphanet:29073,Orphanet:85443|Human Phenotype Ontology:HP:0030692,MONDO:MONDO:0021211,MeSH:D001932,MedGen:C0006118|Human Phenotype Ontology:HP:0030359,MONDO:MONDO:0005097,MedGen:C0149782|Human Phenotype Ontology:HP:0006739,Human Phenotype Ontology:HP:0007614,MONDO:MONDO:0002529,MedGen:C0553723|Human Phenotype Ontology:HP:0001914,Human Phenotype Ontology:HP:0004808,Human Phenotype Ontology:HP:0004843,Human Phenotype Ontology:HP:0005516,Human Phenotype Ontology:HP:0006724,Human Phenotype Ontology:HP:0006728,MONDO:MONDO:0018874,MeSH:D015470,MedGen:C0023467,OMIM:601626,Orphanet:519|Human Phenotype Ontology:HP:0030078,MONDO:MONDO:0005061,MeSH:D000077192,MedGen:C0152013|Human Phenotype Ontology:HP:0030357,MONDO:MONDO:0008433,MeSH:D055752,MedGen:C0149925,OMIM:182280,Orphanet:70573|MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162] | |
248_ARG | GLY |
ClinVar chr17:7577539 |
rs121912651
|
Pathogenic/Likely pathogenic | - | Uterine carcinosarcoma|Pancreatic adenocarcinoma|Breast neoplasm|Neoplasm of the large intestine|Squamous cell lung carcinoma|Multiple myeloma|Brainstem glioma|Ovarian serous cystadenocarcinoma|B-cell chronic lymphocytic leukemia|Malignant melanoma of skin|Squamous cell carcinoma of the head and neck|Transitional cell carcinoma of the bladder|Myelodysplastic syndrome|Carcinoma of esophagus|Malignant neoplasm of body of uterus|Neoplasm of brain|Prostate adenocarcinoma|Small cell lung carcinoma|Hepatocellular carcinoma|Acute myeloid leukemia|Gastric adenocarcinoma|Medulloblastoma|Glioblastoma|Lung adenocarcinoma|Li-Fraumeni syndrome|Squamous cell carcinoma of the skin|Hereditary cancer-predisposing syndrome|Carcinoma of colon [MONDO:MONDO:0006485,MedGen:C0280630|Human Phenotype Ontology:HP:0006725,MONDO:MONDO:0006047,MedGen:C0281361|Human Phenotype Ontology:HP:0010623,Human Phenotype Ontology:HP:0100013,MONDO:MONDO:0021100,MeSH:D001943,MedGen:C1458155|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|Human Phenotype Ontology:HP:0030359,MONDO:MONDO:0005097,MedGen:C0149782|Human Phenotype Ontology:HP:0006775,MONDO:MONDO:0009693,MeSH:D009101,MedGen:C0026764,OMIM:254500,Orphanet:29073,Orphanet:85443|Human Phenotype Ontology:HP:0010796,MONDO:MONDO:0002911,MedGen:C0677865|MONDO:MONDO:0006046,MedGen:C0279663|Human Phenotype Ontology:HP:0005550,Human Phenotype Ontology:HP:0006734,Human Phenotype Ontology:HP:0006760,MONDO:MONDO:0004948,MeSH:D015451,MedGen:C0023434,OMIM:151400,Orphanet:67038|Human Phenotype Ontology:HP:0012056,MONDO:MONDO:0005012,MeSH:C562393,MedGen:C0151779|MONDO:MONDO:0010150,MeSH:D000077195,MedGen:C1168401,OMIM:275355,Orphanet:67037|Human Phenotype Ontology:HP:0006740,MONDO:MONDO:0005611,MedGen:C0279680|MONDO:MONDO:0018881,MeSH:D009190,MedGen:C3463824,OMIM:614286,Orphanet:52688|Human Phenotype Ontology:HP:0011459,MONDO:MONDO:0019086,MedGen:C0152018,Orphanet:70482|MedGen:C0153574|Human Phenotype Ontology:HP:0030692,MONDO:MONDO:0021211,MeSH:D001932,MedGen:C0006118|MONDO:MONDO:0005082,MedGen:C0007112|Human Phenotype Ontology:HP:0030357,MONDO:MONDO:0008433,MeSH:D055752,MedGen:C0149925,OMIM:182280,Orphanet:70573|Human Phenotype Ontology:HP:0001402,Human Phenotype Ontology:HP:0002899,Human Phenotype Ontology:HP:0003007,Human Phenotype Ontology:HP:0006750,MONDO:MONDO:0007256,MedGen:C2239176,OMIM:114550,Orphanet:88673|Human Phenotype Ontology:HP:0001914,Human Phenotype Ontology:HP:0004808,Human Phenotype Ontology:HP:0004843,Human Phenotype Ontology:HP:0005516,Human Phenotype Ontology:HP:0006724,Human Phenotype Ontology:HP:0006728,MONDO:MONDO:0018874,MeSH:D015470,MedGen:C0023467,OMIM:601626,Orphanet:519|Human Phenotype Ontology:HP:0033770,MONDO:MONDO:0005036,MedGen:C0278701|Human Phenotype Ontology:HP:0002885,MONDO:MONDO:0007959,MeSH:D008527,MedGen:C0025149,OMIM:155255,Orphanet:616|MONDO:MONDO:0018177,MeSH:D005909,MedGen:C0017636,Orphanet:360|Human Phenotype Ontology:HP:0030078,MONDO:MONDO:0005061,MeSH:D000077192,MedGen:C0152013|MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524|Human Phenotype Ontology:HP:0006739,Human Phenotype Ontology:HP:0007614,MONDO:MONDO:0002529,MedGen:C0553723|MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162|MONDO:MONDO:0002032,MedGen:C0699790] | |
249_ARG | GLY | VAR_005985 |
rs587782082
|
US | - | Sporadic cancers | |
249_ARG | SER | VAR_005986 |
rs28934571
|
US | - | Sporadic cancers | |
249_ARG | MET | VAR_033037 |
rs587782329
|
US | - | Sporadic cancers | |
249_ARG | ILE | VAR_045247 |
-
|
US | - | A sporadic cancer | |
249_ARG | LYS | VAR_045248 |
rs587782329
|
US | - | Sporadic cancers | |
249_ARG | THR | VAR_045249 |
rs587782329
|
US | - | Sporadic cancers | |
249_ARG | TRP | VAR_045250 |
rs587782082
|
US | - | Sporadic cancers | |
249_ARG | ASN | VAR_045856 |
-
|
US | - | A sporadic cancer | |
249_ARG | SER |
ClinVar chr17:7577534 |
rs28934571
|
Pathogenic/Likely pathogenic | - | Hepatocellular carcinoma|Cervical cancer|Li-Fraumeni syndrome|Hereditary cancer-predisposing syndrome|Neoplasm of ovary|Squamous cell carcinoma of the head and neck|not provided [Human Phenotype Ontology:HP:0001402,Human Phenotype Ontology:HP:0002899,Human Phenotype Ontology:HP:0003007,Human Phenotype Ontology:HP:0006750,MONDO:MONDO:0007256,MedGen:C2239176,OMIM:114550,Orphanet:88673|Human Phenotype Ontology:HP:0030079,MONDO:MONDO:0002974,MedGen:C4048328,OMIM:603956|MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524|MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162|Human Phenotype Ontology:HP:0100615,MONDO:MONDO:0021068,MeSH:D010051,MedGen:C0919267,OMIM:167000|MONDO:MONDO:0010150,MeSH:D000077195,MedGen:C1168401,OMIM:275355,Orphanet:67037|MedGen:C3661900] | |
249_ARG | THR |
ClinVar chr17:7577535 |
rs587782329
|
Pathogenic | - | Medulloblastoma|Glioblastoma|Ovarian serous cystadenocarcinoma|Squamous cell lung carcinoma|Malignant neoplasm of body of uterus|Breast neoplasm|Squamous cell carcinoma of the head and neck|Prostate adenocarcinoma|Pancreatic adenocarcinoma|Squamous cell carcinoma of the skin|Hepatocellular carcinoma|Uterine carcinosarcoma|Small cell lung carcinoma|Gastric adenocarcinoma|Carcinoma of esophagus|Acute myeloid leukemia|Lung adenocarcinoma|not provided|Hereditary cancer-predisposing syndrome [Human Phenotype Ontology:HP:0002885,MONDO:MONDO:0007959,MeSH:D008527,MedGen:C0025149,OMIM:155255,Orphanet:616|MONDO:MONDO:0018177,MeSH:D005909,MedGen:C0017636,Orphanet:360|MONDO:MONDO:0006046,MedGen:C0279663|Human Phenotype Ontology:HP:0030359,MONDO:MONDO:0005097,MedGen:C0149782|MedGen:C0153574|Human Phenotype Ontology:HP:0010623,Human Phenotype Ontology:HP:0100013,MONDO:MONDO:0021100,MeSH:D001943,MedGen:C1458155|MONDO:MONDO:0010150,MeSH:D000077195,MedGen:C1168401,OMIM:275355,Orphanet:67037|MONDO:MONDO:0005082,MedGen:C0007112|Human Phenotype Ontology:HP:0006725,MONDO:MONDO:0006047,MedGen:C0281361|Human Phenotype Ontology:HP:0006739,Human Phenotype Ontology:HP:0007614,MONDO:MONDO:0002529,MedGen:C0553723|Human Phenotype Ontology:HP:0001402,Human Phenotype Ontology:HP:0002899,Human Phenotype Ontology:HP:0003007,Human Phenotype Ontology:HP:0006750,MONDO:MONDO:0007256,MedGen:C2239176,OMIM:114550,Orphanet:88673|MONDO:MONDO:0006485,MedGen:C0280630|Human Phenotype Ontology:HP:0030357,MONDO:MONDO:0008433,MeSH:D055752,MedGen:C0149925,OMIM:182280,Orphanet:70573|Human Phenotype Ontology:HP:0033770,MONDO:MONDO:0005036,MedGen:C0278701|Human Phenotype Ontology:HP:0011459,MONDO:MONDO:0019086,MedGen:C0152018,Orphanet:70482|Human Phenotype Ontology:HP:0001914,Human Phenotype Ontology:HP:0004808,Human Phenotype Ontology:HP:0004843,Human Phenotype Ontology:HP:0005516,Human Phenotype Ontology:HP:0006724,Human Phenotype Ontology:HP:0006728,MONDO:MONDO:0018874,MeSH:D015470,MedGen:C0023467,OMIM:601626,Orphanet:519|Human Phenotype Ontology:HP:0030078,MONDO:MONDO:0005061,MeSH:D000077192,MedGen:C0152013|MedGen:C3661900|MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162] | |
250_PRO | ALA | VAR_045251 |
-
|
US | - | Sporadic cancers | |
250_PRO | HIS | VAR_045252 |
-
|
US | - | Sporadic cancers | |
250_PRO | GLN | VAR_045253 |
-
|
US | - | Sporadic cancers | |
250_PRO | SER | VAR_045254 |
-
|
US | - | Sporadic cancers | |
250_PRO | THR | VAR_045255 |
-
|
US | - | Sporadic cancers | |
250_PRO | PHE | VAR_045857 |
-
|
US | - | Sporadic cancers | |
250_PRO | ASN | VAR_045858 |
-
|
US | - | Sporadic cancers | |
250_PRO | LEU | VAR_047192 |
rs1064794311
|
US | - | Sporadic cancers | |
251_ILE | ASN | VAR_005987 |
-
|
US | - | Sporadic cancers | |
251_ILE | SER | VAR_033038 |
rs730882027
|
US | - | Sporadic cancers | |
251_ILE | PHE | VAR_045256 |
-
|
US | - | Sporadic cancers | |
251_ILE | LEU | VAR_045257 |
rs730882007
|
US | - | Sporadic cancers | |
251_ILE | MET | VAR_045258 |
rs878854074
|
LP/P | - | Li-Fraumeni syndrome (LFS) [MIM:151623] | |
251_ILE | THR | VAR_045259 |
-
|
US | - | Sporadic cancers | |
251_ILE | VAL | VAR_045260 |
-
|
US | - | Sporadic cancers | |
251_ILE | LEU |
ClinVar chr17:7577530 |
rs730882007
|
Pathogenic/Likely pathogenic | - | not provided|Hereditary cancer-predisposing syndrome|Neoplasm of ovary|Gastric cancer|Li-Fraumeni syndrome 1 [MedGen:C3661900|MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162|Human Phenotype Ontology:HP:0100615,MONDO:MONDO:0021068,MeSH:D010051,MedGen:C0919267,OMIM:167000|Human Phenotype Ontology:HP:0012126,MONDO:MONDO:0001056,MeSH:D013274,MedGen:C0024623,OMIM:613659|Gene:553989,MedGen:C1835398,OMIM:151623,Orphanet:524] | |
251_ILE | PHE |
ClinVar chr17:7577530 |
rs730882007
|
Likely pathogenic | - | Li-Fraumeni syndrome [MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524] | |
252_LEU | PRO | VAR_005988 |
rs121912653
|
LP/P | - | Li-Fraumeni syndrome (LFS) [MIM:151623] | |
252_LEU | PHE | VAR_045261 |
-
|
US | - | Sporadic cancers | |
252_LEU | HIS | VAR_045262 |
-
|
US | - | A sporadic cancer | |
252_LEU | ILE | VAR_045263 |
-
|
US | - | Sporadic cancers | |
252_LEU | VAL | VAR_045264 |
-
|
US | - | A sporadic cancer | |
253_THR | ALA | VAR_045265 |
-
|
US | - | Sporadic cancers | |
253_THR | ILE | VAR_045266 |
-
|
US | - | Sporadic cancers | |
253_THR | ASN | VAR_045267 |
rs1555525465
|
US | - | Sporadic cancers | |
253_THR | SER | VAR_045268 |
-
|
US | - | Sporadic cancers | |
253_THR | PRO | VAR_047193 |
-
|
US | - | Sporadic cancers | |
253_THR | ALA |
ClinVar chr17:7577524 |
rs1597364185
|
Pathogenic/Likely pathogenic | - | Hereditary cancer-predisposing syndrome|Li-Fraumeni syndrome [MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162|MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524] | |
254_ILE | ASN | VAR_017908 |
-
|
US | - | Sporadic cancers | |
254_ILE | THR | VAR_017909 |
-
|
US | - | Sporadic cancers | |
254_ILE | PHE | VAR_045269 |
-
|
US | - | A sporadic cancer | |
254_ILE | LEU | VAR_045270 |
-
|
US | - | A sporadic cancer | |
254_ILE | MET | VAR_045271 |
-
|
US | - | A sporadic cancer | |
254_ILE | SER | VAR_045272 |
rs1330865474
|
US | - | Sporadic cancers | |
254_ILE | VAL | VAR_045273 |
rs746601313
|
US | - | Sporadic cancers | |
254_ILE | ASP | VAR_045859 |
-
|
US | - | Sporadic cancers | |
254_ILE | ASN |
ClinVar chr17:7577520 |
rs1330865474
|
Pathogenic | - | Li-Fraumeni syndrome [MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524] | |
254_ILE | THR |
ClinVar chr17:7577520 |
-
|
Pathogenic/Likely pathogenic | - | Hereditary cancer-predisposing syndrome|Acute myeloid leukemia|Li-Fraumeni syndrome 1|Li-Fraumeni syndrome [MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162|Human Phenotype Ontology:HP:0001914,Human Phenotype Ontology:HP:0004808,Human Phenotype Ontology:HP:0004843,Human Phenotype Ontology:HP:0005516,Human Phenotype Ontology:HP:0006724,Human Phenotype Ontology:HP:0006728,MONDO:MONDO:0018874,MeSH:D015470,MedGen:C0023467,OMIM:601626,Orphanet:519|Gene:553989,MedGen:C1835398,OMIM:151623,Orphanet:524|MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524] | |
255_ILE | PHE | VAR_045274 |
rs1057519995
|
US | - | Sporadic cancers | |
255_ILE | MET | VAR_045275 |
-
|
US | - | Sporadic cancers | |
255_ILE | ASN | VAR_045276 |
rs876659675
|
US | - | Sporadic cancers | |
255_ILE | SER | VAR_045277 |
rs876659675
|
US | - | Sporadic cancers | |
255_ILE | THR | VAR_045278 |
rs876659675
|
US | - | Sporadic cancers | |
255_ILE | VAL | VAR_045279 |
-
|
US | - | Sporadic cancers | |
256_THR | ILE | VAR_045280 |
-
|
US | - | A brain tumor with no family history | |
256_THR | LYS | VAR_045281 |
-
|
US | - | Sporadic cancers | |
256_THR | PRO | VAR_045282 |
-
|
US | - | Sporadic cancers | |
256_THR | SER | VAR_045283 |
-
|
US | - | Sporadic cancers | |
257_LEU | PRO | VAR_005989 |
-
|
US | - | Sporadic cancers | |
257_LEU | GLN | VAR_045284 |
rs28934577
|
LP/P | - | Li-Fraumeni syndrome (LFS) [MIM:151623] | |
257_LEU | ARG | VAR_045285 |
rs28934577
|
US | - | Sporadic cancers | |
257_LEU | VAL | VAR_045286 |
-
|
US | - | Sporadic cancers | |
258_GLU | ASP | VAR_005990 |
-
|
US | - | Sporadic cancers | |
258_GLU | LYS | VAR_005991 |
rs121912652
|
LP/P | - | Li-Fraumeni syndrome (LFS) [MIM:151623] | |
258_GLU | ALA | VAR_045287 |
-
|
US | - | Sporadic cancers | |
258_GLU | GLY | VAR_045288 |
rs1060501201
|
US | - | Sporadic cancers | |
258_GLU | GLN | VAR_045289 |
-
|
US | - | Sporadic cancers | |
258_GLU | VAL | VAR_045290 |
-
|
US | - | Sporadic cancers | |
258_GLU | LEU | VAR_045860 |
-
|
US | - | A sporadic cancer | |
258_GLU | LYS |
ClinVar chr17:7577509 |
rs121912652
|
Pathogenic/Likely pathogenic | - | Li-Fraumeni syndrome 1|not provided|not specified|Hereditary cancer-predisposing syndrome|Li-Fraumeni syndrome|Neoplasm of ovary [Gene:553989,MedGen:C1835398,OMIM:151623,Orphanet:524|MedGen:C3661900|MedGen:CN169374|MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162|MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524|Human Phenotype Ontology:HP:0100615,MONDO:MONDO:0021068,MeSH:D010051,MedGen:C0919267,OMIM:167000] | |
258_GLU | TER |
ClinVar chr17:7577509 |
rs121912652
|
Pathogenic | - | Hereditary cancer-predisposing syndrome|Neoplasm of ovary|Li-Fraumeni syndrome 1|Li-Fraumeni syndrome [MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162|Human Phenotype Ontology:HP:0100615,MONDO:MONDO:0021068,MeSH:D010051,MedGen:C0919267,OMIM:167000|Gene:553989,MedGen:C1835398,OMIM:151623,Orphanet:524|MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524] | |
259_ASP | TYR | VAR_033039 |
-
|
US | - | Sporadic cancers | |
259_ASP | GLU | VAR_045291 |
-
|
US | - | Sporadic cancers | |
259_ASP | GLY | VAR_045292 |
rs745425759
|
US | - | Sporadic cancers | |
259_ASP | HIS | VAR_045293 |
-
|
US | - | Sporadic cancers | |
259_ASP | ASN | VAR_045294 |
-
|
US | - | Sporadic cancers | |
259_ASP | VAL | VAR_045295 |
-
|
US | - | Sporadic cancers | |
259_ASP | PRO | VAR_045861 |
-
|
US | - | A sporadic cancer | |
259_ASP | SER | VAR_045862 |
-
|
US | - | A sporadic cancer | |
259_ASP | ALA | VAR_047194 |
-
|
US | - | A sporadic cancer | |
259_ASP | ALA |
ClinVar chr17:7577505 |
-
|
Pathogenic | - | Malignant lymphoma, large B-cell, diffuse [MONDO:MONDO:0018905,MeSH:D016403,MedGen:C0079744,Orphanet:544] | |
260_SER | ALA | VAR_045296 |
-
|
US | - | Sporadic cancers | |
260_SER | CYS | VAR_045297 |
-
|
US | - | Sporadic cancers | |
260_SER | PHE | VAR_045298 |
-
|
US | - | Sporadic cancers | |
260_SER | PRO | VAR_045299 |
-
|
US | - | Sporadic cancers | |
260_SER | THR | VAR_045300 |
-
|
US | - | A sporadic cancer | |
260_SER | TYR | VAR_045301 |
rs876658916
|
US | - | Sporadic cancers | |
261_SER | CYS | VAR_045302 |
-
|
US | - | A sporadic cancer | |
261_SER | GLY | VAR_045303 |
-
|
US | - | Sporadic cancers | |
261_SER | ILE | VAR_045304 |
-
|
US | - | Sporadic cancers | |
261_SER | ASN | VAR_045305 |
-
|
US | - | A sporadic cancer | |
261_SER | ARG | VAR_045306 |
-
|
US | - | Sporadic cancers | |
262_GLY | CYS | VAR_045307 |
rs200579969
|
US | - | A sporadic cancer | |
262_GLY | SER | VAR_045308 |
rs200579969
|
US | - | Sporadic cancers | |
262_GLY | VAL | VAR_045309 |
rs1131691025
|
US | - | Sporadic cancers | |
262_GLY | HIS | VAR_045863 |
-
|
US | - | A sporadic cancer | |
262_GLY | ASP | VAR_047196 |
-
|
US | - | Sporadic cancers | |
263_ASN | ASP | VAR_045310 |
rs72661119
|
US | - | Sporadic cancers | |
263_ASN | HIS | VAR_045311 |
-
|
US | - | Sporadic cancers | |
263_ASN | ILE | VAR_045312 |
-
|
US | - | Sporadic cancers | |
263_ASN | LYS | VAR_045313 |
-
|
US | - | A sporadic cancer | |
263_ASN | SER | VAR_045314 |
-
|
US | - | A sporadic cancer | |
263_ASN | ASP |
gnomAD chr17:7577151 |
rs72661119
|
- | 0.000113647 | - | |
264_LEU | ILE | VAR_045315 |
-
|
US | - | Sporadic cancers | |
264_LEU | PRO | VAR_045316 |
rs1555525353
|
US | - | A sporadic cancer | |
264_LEU | GLN | VAR_045317 |
-
|
US | - | A sporadic cancer | |
264_LEU | ARG | VAR_045318 |
-
|
US | - | Sporadic cancers | |
264_LEU | VAL | VAR_045319 |
-
|
US | - | A sporadic cancer | |
264_LEU | VAL |
8.3kJPN chr17:7577148 |
-
|
- | 0.0001 | - | |
265_LEU | MET | VAR_045320 |
-
|
US | - | Sporadic cancers | |
265_LEU | PRO | VAR_045321 |
rs879253942
|
LP/P | - | Li-Fraumeni syndrome (LFS) [MIM:151623] | |
265_LEU | GLN | VAR_045322 |
-
|
US | - | Sporadic cancers | |
265_LEU | ARG | VAR_047197 |
-
|
US | - | Sporadic cancers | |
265_LEU | PRO |
ClinVar chr17:7577144 |
rs879253942
|
Pathogenic/Likely pathogenic | - | not provided|Li-Fraumeni syndrome|Hereditary cancer-predisposing syndrome|Li-Fraumeni syndrome 1|Rhabdomyosarcoma [MedGen:C3661900|MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524|MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162|Gene:553989,MedGen:C1835398,OMIM:151623,Orphanet:524|Human Phenotype Ontology:HP:0002859,MONDO:MONDO:0005212,MeSH:D012208,MedGen:C0035412,Orphanet:780] | |
265_LEU | GLN |
ClinVar chr17:7577144 |
rs879253942
|
Pathogenic/Likely pathogenic | - | Li-Fraumeni syndrome|Hereditary cancer-predisposing syndrome [MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524|MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162] | |
266_GLY | ALA | VAR_045323 |
-
|
US | - | Sporadic cancers | |
266_GLY | GLU | VAR_045324 |
rs193920774
|
US | - | Sporadic cancers | |
266_GLY | ARG | VAR_045325 |
rs1057519990
|
US | - | Sporadic cancers | |
266_GLY | VAL | VAR_045326 |
rs193920774
|
US | - | Sporadic cancers | |
266_GLY | GLU |
ClinVar chr17:7577141 |
rs193920774
|
Pathogenic/Likely pathogenic | - | Malignant tumor of prostate|Neoplasm of the large intestine|Squamous cell lung carcinoma|not provided|Ovarian serous cystadenocarcinoma|Squamous cell carcinoma of the head and neck|Glioblastoma|Transitional cell carcinoma of the bladder|Hereditary cancer-predisposing syndrome|Neoplasm of brain|Uterine carcinosarcoma|Carcinoma of esophagus|B-cell chronic lymphocytic leukemia|Pancreatic adenocarcinoma|Lung adenocarcinoma|Squamous cell carcinoma of the skin|Malignant melanoma of skin|Breast neoplasm|Small cell lung carcinoma|Hepatocellular carcinoma|Malignant neoplasm of body of uterus|Li-Fraumeni syndrome|Neoplasm of ovary|Li-Fraumeni syndrome 1 [Human Phenotype Ontology:HP:0012125,MONDO:MONDO:0008315,MedGen:C0376358,OMIM:176807,Orphanet:1331|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|Human Phenotype Ontology:HP:0030359,MONDO:MONDO:0005097,MedGen:C0149782|MedGen:C3661900|MONDO:MONDO:0006046,MedGen:C0279663|MONDO:MONDO:0010150,MeSH:D000077195,MedGen:C1168401,OMIM:275355,Orphanet:67037|MONDO:MONDO:0018177,MeSH:D005909,MedGen:C0017636,Orphanet:360|Human Phenotype Ontology:HP:0006740,MONDO:MONDO:0005611,MedGen:C0279680|MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162|Human Phenotype Ontology:HP:0030692,MONDO:MONDO:0021211,MeSH:D001932,MedGen:C0006118|MONDO:MONDO:0006485,MedGen:C0280630|Human Phenotype Ontology:HP:0011459,MONDO:MONDO:0019086,MedGen:C0152018,Orphanet:70482|Human Phenotype Ontology:HP:0005550,Human Phenotype Ontology:HP:0006734,Human Phenotype Ontology:HP:0006760,MONDO:MONDO:0004948,MeSH:D015451,MedGen:C0023434,OMIM:151400,Orphanet:67038|Human Phenotype Ontology:HP:0006725,MONDO:MONDO:0006047,MedGen:C0281361|Human Phenotype Ontology:HP:0030078,MONDO:MONDO:0005061,MeSH:D000077192,MedGen:C0152013|Human Phenotype Ontology:HP:0006739,Human Phenotype Ontology:HP:0007614,MONDO:MONDO:0002529,MedGen:C0553723|Human Phenotype Ontology:HP:0012056,MONDO:MONDO:0005012,MeSH:C562393,MedGen:C0151779|Human Phenotype Ontology:HP:0010623,Human Phenotype Ontology:HP:0100013,MONDO:MONDO:0021100,MeSH:D001943,MedGen:C1458155|Human Phenotype Ontology:HP:0030357,MONDO:MONDO:0008433,MeSH:D055752,MedGen:C0149925,OMIM:182280,Orphanet:70573|Human Phenotype Ontology:HP:0001402,Human Phenotype Ontology:HP:0002899,Human Phenotype Ontology:HP:0003007,Human Phenotype Ontology:HP:0006750,MONDO:MONDO:0007256,MedGen:C2239176,OMIM:114550,Orphanet:88673|MedGen:C0153574|MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524|Human Phenotype Ontology:HP:0100615,MONDO:MONDO:0021068,MeSH:D010051,MedGen:C0919267,OMIM:167000|Gene:553989,MedGen:C1835398,OMIM:151623,Orphanet:524] | |
266_GLY | ARG |
ClinVar chr17:7577142 |
rs1057519990
|
Pathogenic | - | Glioblastoma|Breast neoplasm|Lung adenocarcinoma|Neoplasm of the large intestine|Malignant melanoma of skin|Ovarian serous cystadenocarcinoma|Transitional cell carcinoma of the bladder|Carcinoma of esophagus|Neoplasm of brain|Squamous cell carcinoma of the skin|Uterine carcinosarcoma|Squamous cell lung carcinoma|Squamous cell carcinoma of the head and neck|Pancreatic adenocarcinoma|B-cell chronic lymphocytic leukemia|Malignant neoplasm of body of uterus|Hepatocellular carcinoma|Small cell lung carcinoma|Hereditary cancer-predisposing syndrome|Li-Fraumeni syndrome|Li-Fraumeni syndrome 1 [MONDO:MONDO:0018177,MeSH:D005909,MedGen:C0017636,Orphanet:360|Human Phenotype Ontology:HP:0010623,Human Phenotype Ontology:HP:0100013,MONDO:MONDO:0021100,MeSH:D001943,MedGen:C1458155|Human Phenotype Ontology:HP:0030078,MONDO:MONDO:0005061,MeSH:D000077192,MedGen:C0152013|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|Human Phenotype Ontology:HP:0012056,MONDO:MONDO:0005012,MeSH:C562393,MedGen:C0151779|MONDO:MONDO:0006046,MedGen:C0279663|Human Phenotype Ontology:HP:0006740,MONDO:MONDO:0005611,MedGen:C0279680|Human Phenotype Ontology:HP:0011459,MONDO:MONDO:0019086,MedGen:C0152018,Orphanet:70482|Human Phenotype Ontology:HP:0030692,MONDO:MONDO:0021211,MeSH:D001932,MedGen:C0006118|Human Phenotype Ontology:HP:0006739,Human Phenotype Ontology:HP:0007614,MONDO:MONDO:0002529,MedGen:C0553723|MONDO:MONDO:0006485,MedGen:C0280630|Human Phenotype Ontology:HP:0030359,MONDO:MONDO:0005097,MedGen:C0149782|MONDO:MONDO:0010150,MeSH:D000077195,MedGen:C1168401,OMIM:275355,Orphanet:67037|Human Phenotype Ontology:HP:0006725,MONDO:MONDO:0006047,MedGen:C0281361|Human Phenotype Ontology:HP:0005550,Human Phenotype Ontology:HP:0006734,Human Phenotype Ontology:HP:0006760,MONDO:MONDO:0004948,MeSH:D015451,MedGen:C0023434,OMIM:151400,Orphanet:67038|MedGen:C0153574|Human Phenotype Ontology:HP:0001402,Human Phenotype Ontology:HP:0002899,Human Phenotype Ontology:HP:0003007,Human Phenotype Ontology:HP:0006750,MONDO:MONDO:0007256,MedGen:C2239176,OMIM:114550,Orphanet:88673|Human Phenotype Ontology:HP:0030357,MONDO:MONDO:0008433,MeSH:D055752,MedGen:C0149925,OMIM:182280,Orphanet:70573|MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162|MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524|Gene:553989,MedGen:C1835398,OMIM:151623,Orphanet:524] | |
266_GLY | ARG |
ClinVar chr17:7577142 |
rs1057519990
|
Pathogenic | - | Li-Fraumeni syndrome|Neoplasm of ovary|Hereditary cancer-predisposing syndrome|Li-Fraumeni syndrome 1 [MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524|Human Phenotype Ontology:HP:0100615,MONDO:MONDO:0021068,MeSH:D010051,MedGen:C0919267,OMIM:167000|MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162|Gene:553989,MedGen:C1835398,OMIM:151623,Orphanet:524] | |
266_GLY | TER |
ClinVar chr17:7577142 |
rs1057519990
|
Pathogenic | - | Lung adenocarcinoma|Li-Fraumeni syndrome [Human Phenotype Ontology:HP:0030078,MONDO:MONDO:0005061,MeSH:D000077192,MedGen:C0152013|MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524] | |
267_ARG | TRP | VAR_036507 |
rs55832599
|
US | - | Sporadic cancers | |
267_ARG | GLY | VAR_045327 |
-
|
US | - | Sporadic cancers | |
267_ARG | HIS | VAR_045328 |
-
|
US | - | A sporadic cancer | |
267_ARG | PRO | VAR_045329 |
rs587780075
|
US | - | Sporadic cancers | |
267_ARG | GLN | VAR_045330 |
rs587780075
|
LP/P | - | Li-Fraumeni syndrome (LFS) [MIM:151623] | |
267_ARG | TRP |
ClinVar chr17:7577139 |
rs55832599
|
Pathogenic/Likely pathogenic | - | Hereditary cancer-predisposing syndrome|not provided|Li-Fraumeni syndrome|11 conditions|Familial cancer of breast|Adrenocortical carcinoma, hereditary|Lip and oral cavity carcinoma|Li-Fraumeni syndrome 1|Breast and/or ovarian cancer [MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162|MedGen:C3661900|MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524|11 conditions|MONDO:MONDO:0016419,MedGen:C0346153,OMIM:114480,Orphanet:227535|MONDO:MONDO:0008734,MedGen:C1859972,OMIM:202300,Orphanet:1501|MONDO:MONDO:0023644,MedGen:C0220641|Gene:553989,MedGen:C1835398,OMIM:151623,Orphanet:524|MedGen:CN221562] | |
267_ARG | GLY |
ClinVar chr17:7577139 |
-
|
Pathogenic | - | Hereditary cancer-predisposing syndrome|Adrenocortical carcinoma, hereditary [MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162|MONDO:MONDO:0008734,MedGen:C1859972,OMIM:202300,Orphanet:1501] | |
267_ARG | ARG |
ClinVar chr17:7577137 |
-
|
Likely pathogenic | - | Acute myeloid leukemia [Human Phenotype Ontology:HP:0001914,Human Phenotype Ontology:HP:0004808,Human Phenotype Ontology:HP:0004843,Human Phenotype Ontology:HP:0005516,Human Phenotype Ontology:HP:0006724,Human Phenotype Ontology:HP:0006728,MONDO:MONDO:0018874,MeSH:D015470,MedGen:C0023467,OMIM:601626,Orphanet:519] | |
268_ASN | HIS | VAR_045331 |
-
|
US | - | Sporadic cancers | |
268_ASN | ILE | VAR_045332 |
-
|
US | - | Sporadic cancers | |
268_ASN | LYS | VAR_045333 |
-
|
US | - | A sporadic cancer | |
268_ASN | SER | VAR_045334 |
-
|
US | - | Sporadic cancers | |
268_ASN | TYR | VAR_045335 |
-
|
US | - | A sporadic cancer | |
268_ASN | PHE | VAR_045864 |
-
|
US | - | A sporadic cancer | |
269_SER | CYS | VAR_045336 |
-
|
US | - | Sporadic cancers | |
269_SER | GLY | VAR_045337 |
-
|
US | - | Sporadic cancers | |
269_SER | ASN | VAR_045338 |
-
|
US | - | Sporadic cancers | |
269_SER | ARG | VAR_045339 |
-
|
US | - | Sporadic cancers | |
269_SER | THR | VAR_045340 |
-
|
US | - | A sporadic cancer | |
269_SER | ILE | VAR_047198 |
-
|
US | - | A sporadic cancer | |
269_SER | ILE |
ClinVar chr17:7577132 |
-
|
Likely pathogenic | - | Acute myeloid leukemia [Human Phenotype Ontology:HP:0001914,Human Phenotype Ontology:HP:0004808,Human Phenotype Ontology:HP:0004843,Human Phenotype Ontology:HP:0005516,Human Phenotype Ontology:HP:0006724,Human Phenotype Ontology:HP:0006728,MONDO:MONDO:0018874,MeSH:D015470,MedGen:C0023467,OMIM:601626,Orphanet:519] | |
270_PHE | CYS | VAR_045341 |
rs1057519986
|
US | - | Sporadic cancers | |
270_PHE | ILE | VAR_045342 |
rs1057519988
|
US | - | Sporadic cancers | |
270_PHE | LEU | VAR_045343 |
rs1057519987
|
US | - | Sporadic cancers | |
270_PHE | SER | VAR_045344 |
rs1057519986
|
US | - | Sporadic cancers | |
270_PHE | VAL | VAR_045345 |
rs1057519988
|
US | - | Sporadic cancers | |
270_PHE | TYR | VAR_045346 |
-
|
US | - | Sporadic cancers | |
270_PHE | SER |
ClinVar chr17:7577129 |
rs1057519986
|
Pathogenic/Likely pathogenic | - | Carcinoma of esophagus|Gastric adenocarcinoma|Lung adenocarcinoma|Squamous cell carcinoma of the head and neck|Ovarian serous cystadenocarcinoma|Squamous cell lung carcinoma|Squamous cell carcinoma of the skin|Neoplasm of brain|Breast neoplasm|not provided|Li-Fraumeni syndrome|Hereditary cancer-predisposing syndrome|Li-Fraumeni syndrome 1 [Human Phenotype Ontology:HP:0011459,MONDO:MONDO:0019086,MedGen:C0152018,Orphanet:70482|Human Phenotype Ontology:HP:0033770,MONDO:MONDO:0005036,MedGen:C0278701|Human Phenotype Ontology:HP:0030078,MONDO:MONDO:0005061,MeSH:D000077192,MedGen:C0152013|MONDO:MONDO:0010150,MeSH:D000077195,MedGen:C1168401,OMIM:275355,Orphanet:67037|MONDO:MONDO:0006046,MedGen:C0279663|Human Phenotype Ontology:HP:0030359,MONDO:MONDO:0005097,MedGen:C0149782|Human Phenotype Ontology:HP:0006739,Human Phenotype Ontology:HP:0007614,MONDO:MONDO:0002529,MedGen:C0553723|Human Phenotype Ontology:HP:0030692,MONDO:MONDO:0021211,MeSH:D001932,MedGen:C0006118|Human Phenotype Ontology:HP:0010623,Human Phenotype Ontology:HP:0100013,MONDO:MONDO:0021100,MeSH:D001943,MedGen:C1458155|MedGen:C3661900|MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524|MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162|Gene:553989,MedGen:C1835398,OMIM:151623,Orphanet:524] | |
270_PHE | LEU |
ClinVar chr17:7577128 |
rs1057519987
|
Likely pathogenic | - | Breast neoplasm|Carcinoma of esophagus|Neoplasm of brain|Ovarian serous cystadenocarcinoma|Squamous cell lung carcinoma|Gastric adenocarcinoma|Lung adenocarcinoma|Squamous cell carcinoma of the head and neck|Squamous cell carcinoma of the skin [Human Phenotype Ontology:HP:0010623,Human Phenotype Ontology:HP:0100013,MONDO:MONDO:0021100,MeSH:D001943,MedGen:C1458155|Human Phenotype Ontology:HP:0011459,MONDO:MONDO:0019086,MedGen:C0152018,Orphanet:70482|Human Phenotype Ontology:HP:0030692,MONDO:MONDO:0021211,MeSH:D001932,MedGen:C0006118|MONDO:MONDO:0006046,MedGen:C0279663|Human Phenotype Ontology:HP:0030359,MONDO:MONDO:0005097,MedGen:C0149782|Human Phenotype Ontology:HP:0033770,MONDO:MONDO:0005036,MedGen:C0278701|Human Phenotype Ontology:HP:0030078,MONDO:MONDO:0005061,MeSH:D000077192,MedGen:C0152013|MONDO:MONDO:0010150,MeSH:D000077195,MedGen:C1168401,OMIM:275355,Orphanet:67037|Human Phenotype Ontology:HP:0006739,Human Phenotype Ontology:HP:0007614,MONDO:MONDO:0002529,MedGen:C0553723] | |
270_PHE | VAL |
ClinVar chr17:7577130 |
rs1057519988
|
Pathogenic | - | Squamous cell lung carcinoma|Squamous cell carcinoma of the skin|Squamous cell carcinoma of the head and neck|Carcinoma of esophagus|Lung adenocarcinoma|Gastric adenocarcinoma|Neoplasm of brain|Breast neoplasm|Ovarian serous cystadenocarcinoma|Hereditary cancer-predisposing syndrome [Human Phenotype Ontology:HP:0030359,MONDO:MONDO:0005097,MedGen:C0149782|Human Phenotype Ontology:HP:0006739,Human Phenotype Ontology:HP:0007614,MONDO:MONDO:0002529,MedGen:C0553723|MONDO:MONDO:0010150,MeSH:D000077195,MedGen:C1168401,OMIM:275355,Orphanet:67037|Human Phenotype Ontology:HP:0011459,MONDO:MONDO:0019086,MedGen:C0152018,Orphanet:70482|Human Phenotype Ontology:HP:0030078,MONDO:MONDO:0005061,MeSH:D000077192,MedGen:C0152013|Human Phenotype Ontology:HP:0033770,MONDO:MONDO:0005036,MedGen:C0278701|Human Phenotype Ontology:HP:0030692,MONDO:MONDO:0021211,MeSH:D001932,MedGen:C0006118|Human Phenotype Ontology:HP:0010623,Human Phenotype Ontology:HP:0100013,MONDO:MONDO:0021100,MeSH:D001943,MedGen:C1458155|MONDO:MONDO:0006046,MedGen:C0279663|MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162] | |
271_GLU | LYS | VAR_036508 |
rs1060501191
|
US | - | Sporadic cancers | |
271_GLU | ALA | VAR_045347 |
-
|
US | - | Sporadic cancers | |
271_GLU | ASP | VAR_045348 |
-
|
US | - | Sporadic cancers | |
271_GLU | GLY | VAR_045349 |
-
|
US | - | Sporadic cancers | |
271_GLU | GLN | VAR_045350 |
-
|
US | - | Sporadic cancers | |
271_GLU | PRO | VAR_045865 |
-
|
US | - | A sporadic cancer | |
271_GLU | ARG | VAR_045866 |
-
|
US | - | A sporadic cancer | |
271_GLU | VAL | VAR_047199 |
-
|
US | - | An osteosarcoma with no family history | |
271_GLU | TER |
ClinVar chr17:7577127 |
rs1060501191
|
Pathogenic | - | Neoplasm of ovary|Hereditary cancer-predisposing syndrome [Human Phenotype Ontology:HP:0100615,MONDO:MONDO:0021068,MeSH:D010051,MedGen:C0919267,OMIM:167000|MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162] | |
272_VAL | LEU | VAR_005992 |
rs121912657
|
LP/P | - | Li-Fraumeni syndrome (LFS) [MIM:151623] | |
272_VAL | ALA | VAR_045351 |
-
|
US | - | A familial cancer not matching LFS | |
272_VAL | GLU | VAR_045352 |
rs876660333
|
US | - | Sporadic cancers | |
272_VAL | GLY | VAR_045353 |
rs876660333
|
US | - | Sporadic cancers | |
272_VAL | MET | VAR_045354 |
rs121912657
|
US | - | Sporadic cancers | |
272_VAL | LEU |
ClinVar chr17:7577124 |
rs121912657
|
Likely pathogenic | - | Li-Fraumeni syndrome 1|Hereditary cancer-predisposing syndrome|Gastric adenocarcinoma|Squamous cell carcinoma of the head and neck|Neoplasm of the large intestine|Breast neoplasm|Pancreatic adenocarcinoma|Papillary renal cell carcinoma type 1|Transitional cell carcinoma of the bladder|Ovarian serous cystadenocarcinoma|Malignant neoplasm of body of uterus|Squamous cell carcinoma of the skin|Lung adenocarcinoma|Medulloblastoma|Multiple myeloma|Li-Fraumeni syndrome [Gene:553989,MedGen:C1835398,OMIM:151623,Orphanet:524|MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162|Human Phenotype Ontology:HP:0033770,MONDO:MONDO:0005036,MedGen:C0278701|MONDO:MONDO:0010150,MeSH:D000077195,MedGen:C1168401,OMIM:275355,Orphanet:67037|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|Human Phenotype Ontology:HP:0010623,Human Phenotype Ontology:HP:0100013,MONDO:MONDO:0021100,MeSH:D001943,MedGen:C1458155|Human Phenotype Ontology:HP:0006725,MONDO:MONDO:0006047,MedGen:C0281361|Human Phenotype Ontology:HP:0011797,MedGen:C1336839,OMIM:605074,Orphanet:47044|Human Phenotype Ontology:HP:0006740,MONDO:MONDO:0005611,MedGen:C0279680|MONDO:MONDO:0006046,MedGen:C0279663|MedGen:C0153574|Human Phenotype Ontology:HP:0006739,Human Phenotype Ontology:HP:0007614,MONDO:MONDO:0002529,MedGen:C0553723|Human Phenotype Ontology:HP:0030078,MONDO:MONDO:0005061,MeSH:D000077192,MedGen:C0152013|Human Phenotype Ontology:HP:0002885,MONDO:MONDO:0007959,MeSH:D008527,MedGen:C0025149,OMIM:155255,Orphanet:616|Human Phenotype Ontology:HP:0006775,MONDO:MONDO:0009693,MeSH:D009101,MedGen:C0026764,OMIM:254500,Orphanet:29073,Orphanet:85443|MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524] | |
272_VAL | MET |
ClinVar chr17:7577124 |
rs121912657
|
Pathogenic | - | Hereditary cancer-predisposing syndrome|Transitional cell carcinoma of the bladder|Papillary renal cell carcinoma type 1|Squamous cell carcinoma of the skin|Malignant neoplasm of body of uterus|Squamous cell carcinoma of the head and neck|Pancreatic adenocarcinoma|Lung adenocarcinoma|Breast neoplasm|Ovarian serous cystadenocarcinoma|Medulloblastoma|Neoplasm of the large intestine|Gastric adenocarcinoma|Li-Fraumeni syndrome|Multiple myeloma|Neoplasm of ovary|Li-Fraumeni syndrome 1|not provided [MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162|Human Phenotype Ontology:HP:0006740,MONDO:MONDO:0005611,MedGen:C0279680|Human Phenotype Ontology:HP:0011797,MedGen:C1336839,OMIM:605074,Orphanet:47044|Human Phenotype Ontology:HP:0006739,Human Phenotype Ontology:HP:0007614,MONDO:MONDO:0002529,MedGen:C0553723|MedGen:C0153574|MONDO:MONDO:0010150,MeSH:D000077195,MedGen:C1168401,OMIM:275355,Orphanet:67037|Human Phenotype Ontology:HP:0006725,MONDO:MONDO:0006047,MedGen:C0281361|Human Phenotype Ontology:HP:0030078,MONDO:MONDO:0005061,MeSH:D000077192,MedGen:C0152013|Human Phenotype Ontology:HP:0010623,Human Phenotype Ontology:HP:0100013,MONDO:MONDO:0021100,MeSH:D001943,MedGen:C1458155|MONDO:MONDO:0006046,MedGen:C0279663|Human Phenotype Ontology:HP:0002885,MONDO:MONDO:0007959,MeSH:D008527,MedGen:C0025149,OMIM:155255,Orphanet:616|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|Human Phenotype Ontology:HP:0033770,MONDO:MONDO:0005036,MedGen:C0278701|MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524|Human Phenotype Ontology:HP:0006775,MONDO:MONDO:0009693,MeSH:D009101,MedGen:C0026764,OMIM:254500,Orphanet:29073,Orphanet:85443|Human Phenotype Ontology:HP:0100615,MONDO:MONDO:0021068,MeSH:D010051,MedGen:C0919267,OMIM:167000|Gene:553989,MedGen:C1835398,OMIM:151623,Orphanet:524|MedGen:C3661900] | |
272_VAL | LEU |
ClinVar chr17:7577124 |
rs121912657
|
Pathogenic/Likely pathogenic | - | Li-Fraumeni syndrome|Hereditary cancer-predisposing syndrome [MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524|MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162] | |
273_ARG | CYS | VAR_005993 |
rs121913343
|
LP/P | - | Li-Fraumeni syndrome (LFS) [MIM:151623] | |
273_ARG | GLY | VAR_005994 |
-
|
LP/P | - | Li-Fraumeni syndrome (LFS) [MIM:151623] | |
273_ARG | HIS | VAR_005995 |
rs28934576
|
LP/P | - | Li-Fraumeni syndrome (LFS) [MIM:151623] | |
273_ARG | LEU | VAR_036509 |
rs28934576
|
LP/P | - | Li-Fraumeni syndrome (LFS) [MIM:151623] | |
273_ARG | PRO | VAR_045355 |
rs28934576
|
US | - | Sporadic cancers | |
273_ARG | GLN | VAR_045356 |
-
|
US | - | Sporadic cancers | |
273_ARG | SER | VAR_045357 |
rs121913343
|
US | - | A familial cancer not matching LFS | |
273_ARG | ASN | VAR_045867 |
-
|
US | - | A sporadic cancer | |
273_ARG | TYR | VAR_045868 |
-
|
US | - | A sporadic cancer | |
273_ARG | HIS |
ClinVar chr17:7577120 |
rs28934576
|
Pathogenic | - | Li-Fraumeni syndrome 1|Thyroid gland undifferentiated (anaplastic) carcinoma|Hereditary cancer-predisposing syndrome|not provided|B-cell chronic lymphocytic leukemia|Adrenal cortex carcinoma|Squamous cell lung carcinoma|Gastric adenocarcinoma|Lung adenocarcinoma|Multiple myeloma|Squamous cell carcinoma of the head and neck|Prostate adenocarcinoma|Neoplasm of brain|Ovarian serous cystadenocarcinoma|Brainstem glioma|Transitional cell carcinoma of the bladder|Glioblastoma|Uterine carcinosarcoma|Malignant melanoma of skin|Neoplasm|Carcinoma of esophagus|Small cell lung carcinoma|Malignant neoplasm of body of uterus|Pancreatic adenocarcinoma|Acute myeloid leukemia|Medulloblastoma|Breast neoplasm|Hepatocellular carcinoma|Neoplasm of the large intestine|Li-Fraumeni syndrome|Neoplasm of ovary|Multiple myeloma [Gene:553989,MedGen:C1835398,OMIM:151623,Orphanet:524|Human Phenotype Ontology:HP:0011779,MONDO:MONDO:0006468,MedGen:C0238461,Orphanet:142|MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162|MedGen:C3661900|Human Phenotype Ontology:HP:0005550,Human Phenotype Ontology:HP:0006734,Human Phenotype Ontology:HP:0006760,MONDO:MONDO:0004948,MeSH:D015451,MedGen:C0023434,OMIM:151400,Orphanet:67038|Human Phenotype Ontology:HP:0002889,Human Phenotype Ontology:HP:0006744,Human Phenotype Ontology:HP:0006759,MONDO:MONDO:0006639,MeSH:D018268,MedGen:C0206686,Orphanet:1501|Human Phenotype Ontology:HP:0030359,MONDO:MONDO:0005097,MedGen:C0149782|Human Phenotype Ontology:HP:0033770,MONDO:MONDO:0005036,MedGen:C0278701|Human Phenotype Ontology:HP:0030078,MONDO:MONDO:0005061,MeSH:D000077192,MedGen:C0152013|Human Phenotype Ontology:HP:0006775,MONDO:MONDO:0009693,MeSH:D009101,MedGen:C0026764,OMIM:254500,Orphanet:29073,Orphanet:85443|MONDO:MONDO:0010150,MeSH:D000077195,MedGen:C1168401,OMIM:275355,Orphanet:67037|MONDO:MONDO:0005082,MedGen:C0007112|Human Phenotype Ontology:HP:0030692,MONDO:MONDO:0021211,MeSH:D001932,MedGen:C0006118|MONDO:MONDO:0006046,MedGen:C0279663|Human Phenotype Ontology:HP:0010796,MONDO:MONDO:0002911,MedGen:C0677865|Human Phenotype Ontology:HP:0006740,MONDO:MONDO:0005611,MedGen:C0279680|MONDO:MONDO:0018177,MeSH:D005909,MedGen:C0017636,Orphanet:360|MONDO:MONDO:0006485,MedGen:C0280630|Human Phenotype Ontology:HP:0012056,MONDO:MONDO:0005012,MeSH:C562393,MedGen:C0151779|Human Phenotype Ontology:HP:0002664,Human Phenotype Ontology:HP:0003008,Human Phenotype Ontology:HP:0006741,MONDO:MONDO:0005070,MeSH:D009369,MedGen:C0027651|Human Phenotype Ontology:HP:0011459,MONDO:MONDO:0019086,MedGen:C0152018,Orphanet:70482|Human Phenotype Ontology:HP:0030357,MONDO:MONDO:0008433,MeSH:D055752,MedGen:C0149925,OMIM:182280,Orphanet:70573|MedGen:C0153574|Human Phenotype Ontology:HP:0006725,MONDO:MONDO:0006047,MedGen:C0281361|Human Phenotype Ontology:HP:0001914,Human Phenotype Ontology:HP:0004808,Human Phenotype Ontology:HP:0004843,Human Phenotype Ontology:HP:0005516,Human Phenotype Ontology:HP:0006724,Human Phenotype Ontology:HP:0006728,MONDO:MONDO:0018874,MeSH:D015470,MedGen:C0023467,OMIM:601626,Orphanet:519|Human Phenotype Ontology:HP:0002885,MONDO:MONDO:0007959,MeSH:D008527,MedGen:C0025149,OMIM:155255,Orphanet:616|Human Phenotype Ontology:HP:0010623,Human Phenotype Ontology:HP:0100013,MONDO:MONDO:0021100,MeSH:D001943,MedGen:C1458155|Human Phenotype Ontology:HP:0001402,Human Phenotype Ontology:HP:0002899,Human Phenotype Ontology:HP:0003007,Human Phenotype Ontology:HP:0006750,MONDO:MONDO:0007256,MedGen:C2239176,OMIM:114550,Orphanet:88673|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524|Human Phenotype Ontology:HP:0100615,MONDO:MONDO:0021068,MeSH:D010051,MedGen:C0919267,OMIM:167000|Human Phenotype Ontology:HP:0006775,MONDO:MONDO:0009693,MeSH:D009101,MedGen:C0026764,OMIM:254500,Orphanet:29073,Orphanet:85443]; Colorectal cancer|Rhabdomyosarcoma|Malignant tumor of breast|Familial cancer of breast|12 conditions|Gastric cancer|Breast and/or ovarian cancer|Adrenocortical carcinoma, hereditary [MONDO:MONDO:0005575,MedGen:C0346629,OMIM:114500|Human Phenotype Ontology:HP:0002859,MONDO:MONDO:0005212,MeSH:D012208,MedGen:C0035412,Orphanet:780|MONDO:MONDO:0007254,MedGen:C0006142|MONDO:MONDO:0016419,MedGen:C0346153,OMIM:114480,Orphanet:227535|12 conditions|Human Phenotype Ontology:HP:0012126,MONDO:MONDO:0001056,MeSH:D013274,MedGen:C0024623,OMIM:613659|MedGen:CN221562|MONDO:MONDO:0008734,MedGen:C1859972,OMIM:202300,Orphanet:1501] | |
273_ARG | CYS |
ClinVar chr17:7577121 |
rs121913343
|
Pathogenic/Likely pathogenic | - | Li-Fraumeni syndrome 1|Malignant tumor of prostate|Hereditary cancer-predisposing syndrome|Li-Fraumeni syndrome|not provided|Breast neoplasm|Neoplasm|Hepatocellular carcinoma|Acute myeloid leukemia|Neoplasm of ovary|Adrenocortical carcinoma, hereditary [Gene:553989,MedGen:C1835398,OMIM:151623,Orphanet:524|Human Phenotype Ontology:HP:0012125,MONDO:MONDO:0008315,MedGen:C0376358,OMIM:176807,Orphanet:1331|MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162|MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524|MedGen:C3661900|Human Phenotype Ontology:HP:0010623,Human Phenotype Ontology:HP:0100013,MONDO:MONDO:0021100,MeSH:D001943,MedGen:C1458155|Human Phenotype Ontology:HP:0002664,Human Phenotype Ontology:HP:0003008,Human Phenotype Ontology:HP:0006741,MONDO:MONDO:0005070,MeSH:D009369,MedGen:C0027651|Human Phenotype Ontology:HP:0001402,Human Phenotype Ontology:HP:0002899,Human Phenotype Ontology:HP:0003007,Human Phenotype Ontology:HP:0006750,MONDO:MONDO:0007256,MedGen:C2239176,OMIM:114550,Orphanet:88673|Human Phenotype Ontology:HP:0001914,Human Phenotype Ontology:HP:0004808,Human Phenotype Ontology:HP:0004843,Human Phenotype Ontology:HP:0005516,Human Phenotype Ontology:HP:0006724,Human Phenotype Ontology:HP:0006728,MONDO:MONDO:0018874,MeSH:D015470,MedGen:C0023467,OMIM:601626,Orphanet:519|Human Phenotype Ontology:HP:0100615,MONDO:MONDO:0021068,MeSH:D010051,MedGen:C0919267,OMIM:167000|MONDO:MONDO:0008734,MedGen:C1859972,OMIM:202300,Orphanet:1501] | |
273_ARG | PRO |
ClinVar chr17:7577120 |
rs28934576
|
Pathogenic | - | Hereditary cancer-predisposing syndrome|Multiple myeloma|Adrenal cortex carcinoma|Transitional cell carcinoma of the bladder|Malignant neoplasm of body of uterus|Prostate adenocarcinoma|Breast neoplasm|Medulloblastoma|Uterine carcinosarcoma|B-cell chronic lymphocytic leukemia|Squamous cell lung carcinoma|Pancreatic adenocarcinoma|Malignant melanoma of skin|Neoplasm of brain|Hepatocellular carcinoma|Squamous cell carcinoma of the head and neck|Neoplasm of the large intestine|Small cell lung carcinoma|Ovarian serous cystadenocarcinoma|Lung adenocarcinoma|Gastric adenocarcinoma|Carcinoma of esophagus|Glioblastoma|Brainstem glioma|Acute myeloid leukemia|Li-Fraumeni syndrome|Neoplasm of ovary|Li-Fraumeni syndrome 1 [MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162|Human Phenotype Ontology:HP:0006775,MONDO:MONDO:0009693,MeSH:D009101,MedGen:C0026764,OMIM:254500,Orphanet:29073,Orphanet:85443|Human Phenotype Ontology:HP:0002889,Human Phenotype Ontology:HP:0006744,Human Phenotype Ontology:HP:0006759,MONDO:MONDO:0006639,MeSH:D018268,MedGen:C0206686,Orphanet:1501|Human Phenotype Ontology:HP:0006740,MONDO:MONDO:0005611,MedGen:C0279680|MedGen:C0153574|MONDO:MONDO:0005082,MedGen:C0007112|Human Phenotype Ontology:HP:0010623,Human Phenotype Ontology:HP:0100013,MONDO:MONDO:0021100,MeSH:D001943,MedGen:C1458155|Human Phenotype Ontology:HP:0002885,MONDO:MONDO:0007959,MeSH:D008527,MedGen:C0025149,OMIM:155255,Orphanet:616|MONDO:MONDO:0006485,MedGen:C0280630|Human Phenotype Ontology:HP:0005550,Human Phenotype Ontology:HP:0006734,Human Phenotype Ontology:HP:0006760,MONDO:MONDO:0004948,MeSH:D015451,MedGen:C0023434,OMIM:151400,Orphanet:67038|Human Phenotype Ontology:HP:0030359,MONDO:MONDO:0005097,MedGen:C0149782|Human Phenotype Ontology:HP:0006725,MONDO:MONDO:0006047,MedGen:C0281361|Human Phenotype Ontology:HP:0012056,MONDO:MONDO:0005012,MeSH:C562393,MedGen:C0151779|Human Phenotype Ontology:HP:0030692,MONDO:MONDO:0021211,MeSH:D001932,MedGen:C0006118|Human Phenotype Ontology:HP:0001402,Human Phenotype Ontology:HP:0002899,Human Phenotype Ontology:HP:0003007,Human Phenotype Ontology:HP:0006750,MONDO:MONDO:0007256,MedGen:C2239176,OMIM:114550,Orphanet:88673|MONDO:MONDO:0010150,MeSH:D000077195,MedGen:C1168401,OMIM:275355,Orphanet:67037|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|Human Phenotype Ontology:HP:0030357,MONDO:MONDO:0008433,MeSH:D055752,MedGen:C0149925,OMIM:182280,Orphanet:70573|MONDO:MONDO:0006046,MedGen:C0279663|Human Phenotype Ontology:HP:0030078,MONDO:MONDO:0005061,MeSH:D000077192,MedGen:C0152013|Human Phenotype Ontology:HP:0033770,MONDO:MONDO:0005036,MedGen:C0278701|Human Phenotype Ontology:HP:0011459,MONDO:MONDO:0019086,MedGen:C0152018,Orphanet:70482|MONDO:MONDO:0018177,MeSH:D005909,MedGen:C0017636,Orphanet:360|Human Phenotype Ontology:HP:0010796,MONDO:MONDO:0002911,MedGen:C0677865|Human Phenotype Ontology:HP:0001914,Human Phenotype Ontology:HP:0004808,Human Phenotype Ontology:HP:0004843,Human Phenotype Ontology:HP:0005516,Human Phenotype Ontology:HP:0006724,Human Phenotype Ontology:HP:0006728,MONDO:MONDO:0018874,MeSH:D015470,MedGen:C0023467,OMIM:601626,Orphanet:519|MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524|Human Phenotype Ontology:HP:0100615,MONDO:MONDO:0021068,MeSH:D010051,MedGen:C0919267,OMIM:167000|Gene:553989,MedGen:C1835398,OMIM:151623,Orphanet:524] | |
273_ARG | LEU |
ClinVar chr17:7577120 |
rs28934576
|
Pathogenic | - | Squamous cell carcinoma of the head and neck|Neoplasm of brain|Pancreatic adenocarcinoma|B-cell chronic lymphocytic leukemia|Lung adenocarcinoma|Neoplasm of the large intestine|Malignant melanoma of skin|Medulloblastoma|Prostate adenocarcinoma|Adrenal cortex carcinoma|Hepatocellular carcinoma|Brainstem glioma|Malignant neoplasm of body of uterus|Carcinoma of esophagus|Small cell lung carcinoma|Acute myeloid leukemia|Breast neoplasm|Multiple myeloma|Gastric adenocarcinoma|Transitional cell carcinoma of the bladder|Glioblastoma|Ovarian serous cystadenocarcinoma|Squamous cell lung carcinoma|Uterine carcinosarcoma|Metastatic pancreatic neuroendocrine tumours|Hereditary cancer-predisposing syndrome|Li-Fraumeni syndrome|Neoplasm of ovary|not provided|Li-Fraumeni syndrome 1|12 conditions [MONDO:MONDO:0010150,MeSH:D000077195,MedGen:C1168401,OMIM:275355,Orphanet:67037|Human Phenotype Ontology:HP:0030692,MONDO:MONDO:0021211,MeSH:D001932,MedGen:C0006118|Human Phenotype Ontology:HP:0006725,MONDO:MONDO:0006047,MedGen:C0281361|Human Phenotype Ontology:HP:0005550,Human Phenotype Ontology:HP:0006734,Human Phenotype Ontology:HP:0006760,MONDO:MONDO:0004948,MeSH:D015451,MedGen:C0023434,OMIM:151400,Orphanet:67038|Human Phenotype Ontology:HP:0030078,MONDO:MONDO:0005061,MeSH:D000077192,MedGen:C0152013|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|Human Phenotype Ontology:HP:0012056,MONDO:MONDO:0005012,MeSH:C562393,MedGen:C0151779|Human Phenotype Ontology:HP:0002885,MONDO:MONDO:0007959,MeSH:D008527,MedGen:C0025149,OMIM:155255,Orphanet:616|MONDO:MONDO:0005082,MedGen:C0007112|Human Phenotype Ontology:HP:0002889,Human Phenotype Ontology:HP:0006744,Human Phenotype Ontology:HP:0006759,MONDO:MONDO:0006639,MeSH:D018268,MedGen:C0206686,Orphanet:1501|Human Phenotype Ontology:HP:0001402,Human Phenotype Ontology:HP:0002899,Human Phenotype Ontology:HP:0003007,Human Phenotype Ontology:HP:0006750,MONDO:MONDO:0007256,MedGen:C2239176,OMIM:114550,Orphanet:88673|Human Phenotype Ontology:HP:0010796,MONDO:MONDO:0002911,MedGen:C0677865|MedGen:C0153574|Human Phenotype Ontology:HP:0011459,MONDO:MONDO:0019086,MedGen:C0152018,Orphanet:70482|Human Phenotype Ontology:HP:0030357,MONDO:MONDO:0008433,MeSH:D055752,MedGen:C0149925,OMIM:182280,Orphanet:70573|Human Phenotype Ontology:HP:0001914,Human Phenotype Ontology:HP:0004808,Human Phenotype Ontology:HP:0004843,Human Phenotype Ontology:HP:0005516,Human Phenotype Ontology:HP:0006724,Human Phenotype Ontology:HP:0006728,MONDO:MONDO:0018874,MeSH:D015470,MedGen:C0023467,OMIM:601626,Orphanet:519|Human Phenotype Ontology:HP:0010623,Human Phenotype Ontology:HP:0100013,MONDO:MONDO:0021100,MeSH:D001943,MedGen:C1458155|Human Phenotype Ontology:HP:0006775,MONDO:MONDO:0009693,MeSH:D009101,MedGen:C0026764,OMIM:254500,Orphanet:29073,Orphanet:85443|Human Phenotype Ontology:HP:0033770,MONDO:MONDO:0005036,MedGen:C0278701|Human Phenotype Ontology:HP:0006740,MONDO:MONDO:0005611,MedGen:C0279680|MONDO:MONDO:0018177,MeSH:D005909,MedGen:C0017636,Orphanet:360|MONDO:MONDO:0006046,MedGen:C0279663|Human Phenotype Ontology:HP:0030359,MONDO:MONDO:0005097,MedGen:C0149782|MONDO:MONDO:0006485,MedGen:C0280630||MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162|MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524|Human Phenotype Ontology:HP:0100615,MONDO:MONDO:0021068,MeSH:D010051,MedGen:C0919267,OMIM:167000|MedGen:C3661900|Gene:553989,MedGen:C1835398,OMIM:151623,Orphanet:524|12 conditions] | |
273_ARG | SER |
ClinVar chr17:7577121 |
rs121913343
|
Pathogenic | - | Lung adenocarcinoma|Glioblastoma|Ovarian serous cystadenocarcinoma|Malignant neoplasm of body of uterus|B-cell chronic lymphocytic leukemia|Hepatocellular carcinoma|Neoplasm of brain|Malignant melanoma of skin|Medulloblastoma|Squamous cell carcinoma of the head and neck|Carcinoma of esophagus|Multiple myeloma|Brainstem glioma|Adrenal cortex carcinoma|Prostate adenocarcinoma|Small cell lung carcinoma|Pancreatic adenocarcinoma|Squamous cell lung carcinoma|Neoplasm of the large intestine|Gastric adenocarcinoma|Uterine carcinosarcoma|Acute myeloid leukemia|Breast neoplasm|Transitional cell carcinoma of the bladder|Hereditary cancer-predisposing syndrome|Li-Fraumeni syndrome|Li-Fraumeni syndrome 1 [Human Phenotype Ontology:HP:0030078,MONDO:MONDO:0005061,MeSH:D000077192,MedGen:C0152013|MONDO:MONDO:0018177,MeSH:D005909,MedGen:C0017636,Orphanet:360|MONDO:MONDO:0006046,MedGen:C0279663|MedGen:C0153574|Human Phenotype Ontology:HP:0005550,Human Phenotype Ontology:HP:0006734,Human Phenotype Ontology:HP:0006760,MONDO:MONDO:0004948,MeSH:D015451,MedGen:C0023434,OMIM:151400,Orphanet:67038|Human Phenotype Ontology:HP:0001402,Human Phenotype Ontology:HP:0002899,Human Phenotype Ontology:HP:0003007,Human Phenotype Ontology:HP:0006750,MONDO:MONDO:0007256,MedGen:C2239176,OMIM:114550,Orphanet:88673|Human Phenotype Ontology:HP:0030692,MONDO:MONDO:0021211,MeSH:D001932,MedGen:C0006118|Human Phenotype Ontology:HP:0012056,MONDO:MONDO:0005012,MeSH:C562393,MedGen:C0151779|Human Phenotype Ontology:HP:0002885,MONDO:MONDO:0007959,MeSH:D008527,MedGen:C0025149,OMIM:155255,Orphanet:616|MONDO:MONDO:0010150,MeSH:D000077195,MedGen:C1168401,OMIM:275355,Orphanet:67037|Human Phenotype Ontology:HP:0011459,MONDO:MONDO:0019086,MedGen:C0152018,Orphanet:70482|Human Phenotype Ontology:HP:0006775,MONDO:MONDO:0009693,MeSH:D009101,MedGen:C0026764,OMIM:254500,Orphanet:29073,Orphanet:85443|Human Phenotype Ontology:HP:0010796,MONDO:MONDO:0002911,MedGen:C0677865|Human Phenotype Ontology:HP:0002889,Human Phenotype Ontology:HP:0006744,Human Phenotype Ontology:HP:0006759,MONDO:MONDO:0006639,MeSH:D018268,MedGen:C0206686,Orphanet:1501|MONDO:MONDO:0005082,MedGen:C0007112|Human Phenotype Ontology:HP:0030357,MONDO:MONDO:0008433,MeSH:D055752,MedGen:C0149925,OMIM:182280,Orphanet:70573|Human Phenotype Ontology:HP:0006725,MONDO:MONDO:0006047,MedGen:C0281361|Human Phenotype Ontology:HP:0030359,MONDO:MONDO:0005097,MedGen:C0149782|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|Human Phenotype Ontology:HP:0033770,MONDO:MONDO:0005036,MedGen:C0278701|MONDO:MONDO:0006485,MedGen:C0280630|Human Phenotype Ontology:HP:0001914,Human Phenotype Ontology:HP:0004808,Human Phenotype Ontology:HP:0004843,Human Phenotype Ontology:HP:0005516,Human Phenotype Ontology:HP:0006724,Human Phenotype Ontology:HP:0006728,MONDO:MONDO:0018874,MeSH:D015470,MedGen:C0023467,OMIM:601626,Orphanet:519|Human Phenotype Ontology:HP:0010623,Human Phenotype Ontology:HP:0100013,MONDO:MONDO:0021100,MeSH:D001943,MedGen:C1458155|Human Phenotype Ontology:HP:0006740,MONDO:MONDO:0005611,MedGen:C0279680|MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162|MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524|Gene:553989,MedGen:C1835398,OMIM:151623,Orphanet:524] | |
273_ARG | GLY |
ClinVar chr17:7577121 |
rs121913343
|
Pathogenic | - | Neoplasm of ovary|Li-Fraumeni syndrome|Hereditary cancer-predisposing syndrome|Li-Fraumeni syndrome 1|12 conditions [Human Phenotype Ontology:HP:0100615,MONDO:MONDO:0021068,MeSH:D010051,MedGen:C0919267,OMIM:167000|MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524|MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162|Gene:553989,MedGen:C1835398,OMIM:151623,Orphanet:524|12 conditions] | |
274_VAL | PHE | VAR_005997 |
rs1057520005
|
US | - | Sporadic cancers | |
274_VAL | ALA | VAR_045358 |
rs1057520006
|
US | - | Sporadic cancers | |
274_VAL | ASP | VAR_045359 |
rs1057520006
|
US | - | Sporadic cancers | |
274_VAL | ILE | VAR_045360 |
-
|
US | - | Sporadic cancers | |
274_VAL | LEU | VAR_045361 |
rs1057520005
|
US | - | Sporadic cancers | |
274_VAL | GLY | VAR_047200 |
rs1057520006
|
US | - | Sporadic cancers | |
275_CYS | TYR | VAR_005998 |
rs863224451
|
LP/P | - | Li-Fraumeni syndrome (LFS) [MIM:151623] | |
275_CYS | TRP | VAR_005999 |
rs1555525279
|
US | - | Sporadic cancers | |
275_CYS | PHE | VAR_045362 |
rs863224451
|
US | - | Sporadic cancers | |
275_CYS | GLY | VAR_045363 |
-
|
US | - | Sporadic cancers | |
275_CYS | ARG | VAR_045364 |
rs1057519983
|
US | - | Sporadic cancers | |
275_CYS | SER | VAR_045365 |
rs863224451
|
US | - | Sporadic cancers | |
275_CYS | TYR |
ClinVar chr17:7577114 |
rs863224451
|
Pathogenic/Likely pathogenic | - | Li-Fraumeni syndrome|Multiple myeloma|Neoplasm of brain|Pancreatic adenocarcinoma|Squamous cell carcinoma of the head and neck|not provided|Transitional cell carcinoma of the bladder|Ovarian serous cystadenocarcinoma|Malignant melanoma of skin|Hepatocellular carcinoma|Breast neoplasm|B-cell chronic lymphocytic leukemia|Adrenal cortex carcinoma|Glioblastoma|Papillary renal cell carcinoma type 1|Lung adenocarcinoma|Neoplasm of the large intestine|Carcinoma of esophagus|Hereditary cancer-predisposing syndrome|Neoplasm of ovary|Breast carcinoma|Adrenocortical carcinoma, hereditary|Li-Fraumeni syndrome 1|Acute myeloid leukemia [MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524|Human Phenotype Ontology:HP:0006775,MONDO:MONDO:0009693,MeSH:D009101,MedGen:C0026764,OMIM:254500,Orphanet:29073,Orphanet:85443|Human Phenotype Ontology:HP:0030692,MONDO:MONDO:0021211,MeSH:D001932,MedGen:C0006118|Human Phenotype Ontology:HP:0006725,MONDO:MONDO:0006047,MedGen:C0281361|MONDO:MONDO:0010150,MeSH:D000077195,MedGen:C1168401,OMIM:275355,Orphanet:67037|MedGen:C3661900|Human Phenotype Ontology:HP:0006740,MONDO:MONDO:0005611,MedGen:C0279680|MONDO:MONDO:0006046,MedGen:C0279663|Human Phenotype Ontology:HP:0012056,MONDO:MONDO:0005012,MeSH:C562393,MedGen:C0151779|Human Phenotype Ontology:HP:0001402,Human Phenotype Ontology:HP:0002899,Human Phenotype Ontology:HP:0003007,Human Phenotype Ontology:HP:0006750,MONDO:MONDO:0007256,MedGen:C2239176,OMIM:114550,Orphanet:88673|Human Phenotype Ontology:HP:0010623,Human Phenotype Ontology:HP:0100013,MONDO:MONDO:0021100,MeSH:D001943,MedGen:C1458155|Human Phenotype Ontology:HP:0005550,Human Phenotype Ontology:HP:0006734,Human Phenotype Ontology:HP:0006760,MONDO:MONDO:0004948,MeSH:D015451,MedGen:C0023434,OMIM:151400,Orphanet:67038|Human Phenotype Ontology:HP:0002889,Human Phenotype Ontology:HP:0006744,Human Phenotype Ontology:HP:0006759,MONDO:MONDO:0006639,MeSH:D018268,MedGen:C0206686,Orphanet:1501|MONDO:MONDO:0018177,MeSH:D005909,MedGen:C0017636,Orphanet:360|Human Phenotype Ontology:HP:0011797,MedGen:C1336839,OMIM:605074,Orphanet:47044|Human Phenotype Ontology:HP:0030078,MONDO:MONDO:0005061,MeSH:D000077192,MedGen:C0152013|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|Human Phenotype Ontology:HP:0011459,MONDO:MONDO:0019086,MedGen:C0152018,Orphanet:70482|MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162|Human Phenotype Ontology:HP:0100615,MONDO:MONDO:0021068,MeSH:D010051,MedGen:C0919267,OMIM:167000|Human Phenotype Ontology:HP:0003002,MONDO:MONDO:0004989,MedGen:C0678222|MONDO:MONDO:0008734,MedGen:C1859972,OMIM:202300,Orphanet:1501|Gene:553989,MedGen:C1835398,OMIM:151623,Orphanet:524|Human Phenotype Ontology:HP:0001914,Human Phenotype Ontology:HP:0004808,Human Phenotype Ontology:HP:0004843,Human Phenotype Ontology:HP:0005516,Human Phenotype Ontology:HP:0006724,Human Phenotype Ontology:HP:0006728,MONDO:MONDO:0018874,MeSH:D015470,MedGen:C0023467,OMIM:601626,Orphanet:519] | |
275_CYS | PHE |
ClinVar chr17:7577114 |
rs863224451
|
Pathogenic | - | Lung adenocarcinoma|Pancreatic adenocarcinoma|Neoplasm of brain|Papillary renal cell carcinoma type 1|Breast neoplasm|Ovarian serous cystadenocarcinoma|Squamous cell carcinoma of the head and neck|Malignant melanoma of skin|Multiple myeloma|Transitional cell carcinoma of the bladder|Carcinoma of esophagus|Hepatocellular carcinoma|Adrenal cortex carcinoma|Neoplasm of the large intestine|B-cell chronic lymphocytic leukemia|Glioblastoma|Neoplasm of ovary|Li-Fraumeni syndrome [Human Phenotype Ontology:HP:0030078,MONDO:MONDO:0005061,MeSH:D000077192,MedGen:C0152013|Human Phenotype Ontology:HP:0006725,MONDO:MONDO:0006047,MedGen:C0281361|Human Phenotype Ontology:HP:0030692,MONDO:MONDO:0021211,MeSH:D001932,MedGen:C0006118|Human Phenotype Ontology:HP:0011797,MedGen:C1336839,OMIM:605074,Orphanet:47044|Human Phenotype Ontology:HP:0010623,Human Phenotype Ontology:HP:0100013,MONDO:MONDO:0021100,MeSH:D001943,MedGen:C1458155|MONDO:MONDO:0006046,MedGen:C0279663|MONDO:MONDO:0010150,MeSH:D000077195,MedGen:C1168401,OMIM:275355,Orphanet:67037|Human Phenotype Ontology:HP:0012056,MONDO:MONDO:0005012,MeSH:C562393,MedGen:C0151779|Human Phenotype Ontology:HP:0006775,MONDO:MONDO:0009693,MeSH:D009101,MedGen:C0026764,OMIM:254500,Orphanet:29073,Orphanet:85443|Human Phenotype Ontology:HP:0006740,MONDO:MONDO:0005611,MedGen:C0279680|Human Phenotype Ontology:HP:0011459,MONDO:MONDO:0019086,MedGen:C0152018,Orphanet:70482|Human Phenotype Ontology:HP:0001402,Human Phenotype Ontology:HP:0002899,Human Phenotype Ontology:HP:0003007,Human Phenotype Ontology:HP:0006750,MONDO:MONDO:0007256,MedGen:C2239176,OMIM:114550,Orphanet:88673|Human Phenotype Ontology:HP:0002889,Human Phenotype Ontology:HP:0006744,Human Phenotype Ontology:HP:0006759,MONDO:MONDO:0006639,MeSH:D018268,MedGen:C0206686,Orphanet:1501|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|Human Phenotype Ontology:HP:0005550,Human Phenotype Ontology:HP:0006734,Human Phenotype Ontology:HP:0006760,MONDO:MONDO:0004948,MeSH:D015451,MedGen:C0023434,OMIM:151400,Orphanet:67038|MONDO:MONDO:0018177,MeSH:D005909,MedGen:C0017636,Orphanet:360|Human Phenotype Ontology:HP:0100615,MONDO:MONDO:0021068,MeSH:D010051,MedGen:C0919267,OMIM:167000|MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524] | |
275_CYS | TRP |
ClinVar chr17:7577113 |
rs1555525279
|
Likely pathogenic | - | Hereditary cancer-predisposing syndrome|Neoplasm of ovary [MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162|Human Phenotype Ontology:HP:0100615,MONDO:MONDO:0021068,MeSH:D010051,MedGen:C0919267,OMIM:167000] | |
275_CYS | TER |
ClinVar chr17:7577113 |
rs1555525279
|
Pathogenic | - | Li-Fraumeni syndrome 1 [Gene:553989,MedGen:C1835398,OMIM:151623,Orphanet:524] | |
276_ALA | ASP | VAR_045366 |
rs786202082
|
US | - | Sporadic cancers | |
276_ALA | GLY | VAR_045367 |
rs786202082
|
US | - | Sporadic cancers | |
276_ALA | PRO | VAR_045368 |
rs1131691029
|
US | - | Sporadic cancers | |
276_ALA | SER | VAR_045369 |
-
|
US | - | Sporadic cancers | |
276_ALA | THR | VAR_045370 |
-
|
US | - | Sporadic cancers | |
276_ALA | VAL | VAR_045371 |
-
|
US | - | Sporadic cancers | |
276_ALA | GLY |
ClinVar chr17:7577111 |
rs786202082
|
Pathogenic | - | Hereditary cancer-predisposing syndrome|Li-Fraumeni syndrome [MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162|MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524] | |
277_CYS | GLY | VAR_006000 |
rs1064795369
|
US | - | Sporadic cancers | |
277_CYS | PHE | VAR_045372 |
rs763098116
|
US | - | Sporadic cancers | |
277_CYS | ARG | VAR_045373 |
rs1064795369
|
US | - | Sporadic cancers | |
277_CYS | SER | VAR_045374 |
-
|
US | - | Sporadic cancers | |
277_CYS | TYR | VAR_045375 |
rs763098116
|
US | - | An osteosarcoma with no family history | |
277_CYS | TRP | VAR_047201 |
-
|
US | - | Sporadic cancers | |
277_CYS | TER |
ClinVar chr17:7577107 |
rs1057523347
|
Pathogenic | - | not provided|Li-Fraumeni syndrome|Hereditary cancer-predisposing syndrome [MedGen:C3661900|MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524|MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162] | |
278_PRO | ALA | VAR_006001 |
rs17849781
|
US | - | Sporadic cancers | |
278_PRO | HIS | VAR_006002 |
rs876659802
|
US | - | Sporadic cancers | |
278_PRO | LEU | VAR_006003 |
rs876659802
|
LP/P | - | Li-Fraumeni syndrome (LFS) [MIM:151623] | |
278_PRO | SER | VAR_006004 |
rs17849781
|
LP/P | - | Li-Fraumeni syndrome (LFS) [MIM:151623] | |
278_PRO | THR | VAR_006005 |
rs17849781
|
LP/P | - | Li-Fraumeni syndrome (LFS) [MIM:151623] | |
278_PRO | ARG | VAR_045376 |
rs876659802
|
US | - | Sporadic cancers | |
278_PRO | PHE | VAR_045869 |
-
|
US | - | Sporadic cancers | |
278_PRO | LEU |
ClinVar chr17:7577105 |
rs876659802
|
Pathogenic | - | Hereditary cancer-predisposing syndrome|Neoplasm of brain|Squamous cell carcinoma of the skin|Lung adenocarcinoma|Malignant neoplasm of body of uterus|Multiple myeloma|Neoplasm of the large intestine|Breast neoplasm|Carcinoma of esophagus|Squamous cell lung carcinoma|Malignant melanoma of skin|Pancreatic adenocarcinoma|Ovarian serous cystadenocarcinoma|Squamous cell carcinoma of the head and neck|Neoplasm of ovary|Li-Fraumeni syndrome|Gallbladder cancer|not provided [MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162|Human Phenotype Ontology:HP:0030692,MONDO:MONDO:0021211,MeSH:D001932,MedGen:C0006118|Human Phenotype Ontology:HP:0006739,Human Phenotype Ontology:HP:0007614,MONDO:MONDO:0002529,MedGen:C0553723|Human Phenotype Ontology:HP:0030078,MONDO:MONDO:0005061,MeSH:D000077192,MedGen:C0152013|MedGen:C0153574|Human Phenotype Ontology:HP:0006775,MONDO:MONDO:0009693,MeSH:D009101,MedGen:C0026764,OMIM:254500,Orphanet:29073,Orphanet:85443|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|Human Phenotype Ontology:HP:0010623,Human Phenotype Ontology:HP:0100013,MONDO:MONDO:0021100,MeSH:D001943,MedGen:C1458155|Human Phenotype Ontology:HP:0011459,MONDO:MONDO:0019086,MedGen:C0152018,Orphanet:70482|Human Phenotype Ontology:HP:0030359,MONDO:MONDO:0005097,MedGen:C0149782|Human Phenotype Ontology:HP:0012056,MONDO:MONDO:0005012,MeSH:C562393,MedGen:C0151779|Human Phenotype Ontology:HP:0006725,MONDO:MONDO:0006047,MedGen:C0281361|MONDO:MONDO:0006046,MedGen:C0279663|MONDO:MONDO:0010150,MeSH:D000077195,MedGen:C1168401,OMIM:275355,Orphanet:67037|Human Phenotype Ontology:HP:0100615,MONDO:MONDO:0021068,MeSH:D010051,MedGen:C0919267,OMIM:167000|MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524|MONDO:MONDO:0005411,MedGen:C0153452|MedGen:C3661900] | |
278_PRO | SER |
ClinVar chr17:7577106 |
rs17849781
|
Pathogenic/Likely pathogenic | - | Squamous cell carcinoma of the skin|Squamous cell carcinoma of the head and neck|Malignant melanoma of skin|Lung adenocarcinoma|Neoplasm of brain|Breast neoplasm|Carcinoma of esophagus|Malignant neoplasm of body of uterus|Pancreatic adenocarcinoma|Ovarian serous cystadenocarcinoma|not provided|Squamous cell lung carcinoma|Multiple myeloma|Neoplasm of the large intestine|Li-Fraumeni syndrome|Neoplasm of ovary|Hereditary cancer-predisposing syndrome [Human Phenotype Ontology:HP:0006739,Human Phenotype Ontology:HP:0007614,MONDO:MONDO:0002529,MedGen:C0553723|MONDO:MONDO:0010150,MeSH:D000077195,MedGen:C1168401,OMIM:275355,Orphanet:67037|Human Phenotype Ontology:HP:0012056,MONDO:MONDO:0005012,MeSH:C562393,MedGen:C0151779|Human Phenotype Ontology:HP:0030078,MONDO:MONDO:0005061,MeSH:D000077192,MedGen:C0152013|Human Phenotype Ontology:HP:0030692,MONDO:MONDO:0021211,MeSH:D001932,MedGen:C0006118|Human Phenotype Ontology:HP:0010623,Human Phenotype Ontology:HP:0100013,MONDO:MONDO:0021100,MeSH:D001943,MedGen:C1458155|Human Phenotype Ontology:HP:0011459,MONDO:MONDO:0019086,MedGen:C0152018,Orphanet:70482|MedGen:C0153574|Human Phenotype Ontology:HP:0006725,MONDO:MONDO:0006047,MedGen:C0281361|MONDO:MONDO:0006046,MedGen:C0279663|MedGen:C3661900|Human Phenotype Ontology:HP:0030359,MONDO:MONDO:0005097,MedGen:C0149782|Human Phenotype Ontology:HP:0006775,MONDO:MONDO:0009693,MeSH:D009101,MedGen:C0026764,OMIM:254500,Orphanet:29073,Orphanet:85443|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524|Human Phenotype Ontology:HP:0100615,MONDO:MONDO:0021068,MeSH:D010051,MedGen:C0919267,OMIM:167000|MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162] | |
278_PRO | THR |
ClinVar chr17:7577106 |
rs17849781
|
Pathogenic | - | Malignant neoplasm of body of uterus|Lung adenocarcinoma|Breast neoplasm|Ovarian serous cystadenocarcinoma|Multiple myeloma|Squamous cell lung carcinoma|Malignant melanoma of skin|Neoplasm of brain|Carcinoma of esophagus|Neoplasm of the large intestine|Pancreatic adenocarcinoma|Squamous cell carcinoma of the skin|Squamous cell carcinoma of the head and neck|Neoplasm of ovary|Poly (ADP-Ribose) polymerase inhibitor response|Hereditary cancer-predisposing syndrome|Li-Fraumeni syndrome [MedGen:C0153574|Human Phenotype Ontology:HP:0030078,MONDO:MONDO:0005061,MeSH:D000077192,MedGen:C0152013|Human Phenotype Ontology:HP:0010623,Human Phenotype Ontology:HP:0100013,MONDO:MONDO:0021100,MeSH:D001943,MedGen:C1458155|MONDO:MONDO:0006046,MedGen:C0279663|Human Phenotype Ontology:HP:0006775,MONDO:MONDO:0009693,MeSH:D009101,MedGen:C0026764,OMIM:254500,Orphanet:29073,Orphanet:85443|Human Phenotype Ontology:HP:0030359,MONDO:MONDO:0005097,MedGen:C0149782|Human Phenotype Ontology:HP:0012056,MONDO:MONDO:0005012,MeSH:C562393,MedGen:C0151779|Human Phenotype Ontology:HP:0030692,MONDO:MONDO:0021211,MeSH:D001932,MedGen:C0006118|Human Phenotype Ontology:HP:0011459,MONDO:MONDO:0019086,MedGen:C0152018,Orphanet:70482|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|Human Phenotype Ontology:HP:0006725,MONDO:MONDO:0006047,MedGen:C0281361|Human Phenotype Ontology:HP:0006739,Human Phenotype Ontology:HP:0007614,MONDO:MONDO:0002529,MedGen:C0553723|MONDO:MONDO:0010150,MeSH:D000077195,MedGen:C1168401,OMIM:275355,Orphanet:67037|Human Phenotype Ontology:HP:0100615,MONDO:MONDO:0021068,MeSH:D010051,MedGen:C0919267,OMIM:167000|MedGen:CN322715|MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162|MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524] | |
279_GLY | GLU | VAR_006006 |
rs1064793881
|
US | - | Sporadic cancers | |
279_GLY | ARG | VAR_045377 |
rs1555525248
|
US | - | Sporadic cancers | |
279_GLY | VAL | VAR_045378 |
-
|
US | - | Sporadic cancers | |
279_GLY | TRP | VAR_045379 |
-
|
US | - | Sporadic cancers | |
280_ARG | LYS | VAR_006007 |
rs121912660
|
US | - | A familial cancer not matching LFS | |
280_ARG | ILE | VAR_006008 |
rs121912660
|
US | - | Sporadic cancers | |
280_ARG | THR | VAR_006009 |
rs121912660
|
US | - | Sporadic cancers | |
280_ARG | GLY | VAR_045380 |
rs753660142
|
US | - | Sporadic cancers | |
280_ARG | PRO | VAR_045381 |
-
|
US | - | A sporadic cancer | |
280_ARG | SER | VAR_045382 |
-
|
US | - | Sporadic cancers | |
280_ARG | THR |
ClinVar chr17:7577099 |
rs121912660
|
Pathogenic/Likely pathogenic | - | Nasopharyngeal carcinoma|Li-Fraumeni syndrome|Small cell lung carcinoma|Neoplasm of uterine cervix|Hepatocellular carcinoma|Ovarian serous cystadenocarcinoma|Squamous cell carcinoma of the head and neck|Breast neoplasm|Acute myeloid leukemia|Transitional cell carcinoma of the bladder|Squamous cell lung carcinoma|Squamous cell carcinoma of the skin|Gastric adenocarcinoma|Malignant melanoma of skin|Lung adenocarcinoma|Nasopharyngeal neoplasm|Carcinoma of esophagus|Neoplasm of brain|Uterine carcinosarcoma|Hereditary cancer-predisposing syndrome|Malignant tumor of urinary bladder [MONDO:MONDO:0015459,MedGen:C2931822,OMIM:607107,Orphanet:150|MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524|Human Phenotype Ontology:HP:0030357,MONDO:MONDO:0008433,MeSH:D055752,MedGen:C0149925,OMIM:182280,Orphanet:70573|Human Phenotype Ontology:HP:0032241,MONDO:MONDO:0021230,MeSH:D002583,MedGen:C0007873|Human Phenotype Ontology:HP:0001402,Human Phenotype Ontology:HP:0002899,Human Phenotype Ontology:HP:0003007,Human Phenotype Ontology:HP:0006750,MONDO:MONDO:0007256,MedGen:C2239176,OMIM:114550,Orphanet:88673|MONDO:MONDO:0006046,MedGen:C0279663|MONDO:MONDO:0010150,MeSH:D000077195,MedGen:C1168401,OMIM:275355,Orphanet:67037|Human Phenotype Ontology:HP:0010623,Human Phenotype Ontology:HP:0100013,MONDO:MONDO:0021100,MeSH:D001943,MedGen:C1458155|Human Phenotype Ontology:HP:0001914,Human Phenotype Ontology:HP:0004808,Human Phenotype Ontology:HP:0004843,Human Phenotype Ontology:HP:0005516,Human Phenotype Ontology:HP:0006724,Human Phenotype Ontology:HP:0006728,MONDO:MONDO:0018874,MeSH:D015470,MedGen:C0023467,OMIM:601626,Orphanet:519|Human Phenotype Ontology:HP:0006740,MONDO:MONDO:0005611,MedGen:C0279680|Human Phenotype Ontology:HP:0030359,MONDO:MONDO:0005097,MedGen:C0149782|Human Phenotype Ontology:HP:0006739,Human Phenotype Ontology:HP:0007614,MONDO:MONDO:0002529,MedGen:C0553723|Human Phenotype Ontology:HP:0033770,MONDO:MONDO:0005036,MedGen:C0278701|Human Phenotype Ontology:HP:0012056,MONDO:MONDO:0005012,MeSH:C562393,MedGen:C0151779|Human Phenotype Ontology:HP:0030078,MONDO:MONDO:0005061,MeSH:D000077192,MedGen:C0152013|Human Phenotype Ontology:HP:0100630,MONDO:MONDO:0005375,MeSH:D009303,MedGen:C0027439|Human Phenotype Ontology:HP:0011459,MONDO:MONDO:0019086,MedGen:C0152018,Orphanet:70482|Human Phenotype Ontology:HP:0030692,MONDO:MONDO:0021211,MeSH:D001932,MedGen:C0006118|MONDO:MONDO:0006485,MedGen:C0280630|MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162|MONDO:MONDO:0001187,MedGen:C0005684,OMIM:109800,Orphanet:157980] | |
281_ASP | ALA | VAR_006010 |
rs587781525
|
US | - | Sporadic cancers | |
281_ASP | GLU | VAR_006011 |
rs1057519984
|
US | - | Sporadic cancers | |
281_ASP | GLY | VAR_006012 |
rs587781525
|
US | - | A brain tumor with no family history | |
281_ASP | HIS | VAR_006013 |
rs764146326
|
US | - | Sporadic cancers | |
281_ASP | VAL | VAR_006014 |
rs587781525
|
US | - | A familial cancer not matching LFS | |
281_ASP | TYR | VAR_045383 |
rs764146326
|
US | - | Sporadic cancers | |
281_ASP | ARG | VAR_045870 |
-
|
US | - | A sporadic cancer | |
281_ASP | ASN | VAR_047202 |
rs764146326
|
LP/P | - | Li-Fraumeni syndrome (LFS) [MIM:151623] | |
281_ASP | GLY |
ClinVar chr17:7577096 |
rs587781525
|
Pathogenic | - | Hereditary cancer-predisposing syndrome|Malignant neoplasm of body of uterus|Neuroblastoma|Papillary renal cell carcinoma type 1|Squamous cell carcinoma of the head and neck|Lung adenocarcinoma|Transitional cell carcinoma of the bladder|Squamous cell lung carcinoma|Multiple myeloma|B-cell chronic lymphocytic leukemia|Uterine carcinosarcoma|Glioblastoma|Squamous cell carcinoma of the skin|Breast neoplasm|Pancreatic adenocarcinoma|Hepatocellular carcinoma|Gastric adenocarcinoma|Malignant melanoma of skin|Ovarian serous cystadenocarcinoma|Li-Fraumeni syndrome|Li-Fraumeni syndrome 1|not provided [MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162|MedGen:C0153574|Human Phenotype Ontology:HP:0003006,Human Phenotype Ontology:HP:0006738,MONDO:MONDO:0005072,MeSH:D009447,MedGen:C0027819,Orphanet:635|Human Phenotype Ontology:HP:0011797,MedGen:C1336839,OMIM:605074,Orphanet:47044|MONDO:MONDO:0010150,MeSH:D000077195,MedGen:C1168401,OMIM:275355,Orphanet:67037|Human Phenotype Ontology:HP:0030078,MONDO:MONDO:0005061,MeSH:D000077192,MedGen:C0152013|Human Phenotype Ontology:HP:0006740,MONDO:MONDO:0005611,MedGen:C0279680|Human Phenotype Ontology:HP:0030359,MONDO:MONDO:0005097,MedGen:C0149782|Human Phenotype Ontology:HP:0006775,MONDO:MONDO:0009693,MeSH:D009101,MedGen:C0026764,OMIM:254500,Orphanet:29073,Orphanet:85443|Human Phenotype Ontology:HP:0005550,Human Phenotype Ontology:HP:0006734,Human Phenotype Ontology:HP:0006760,MONDO:MONDO:0004948,MeSH:D015451,MedGen:C0023434,OMIM:151400,Orphanet:67038|MONDO:MONDO:0006485,MedGen:C0280630|MONDO:MONDO:0018177,MeSH:D005909,MedGen:C0017636,Orphanet:360|Human Phenotype Ontology:HP:0006739,Human Phenotype Ontology:HP:0007614,MONDO:MONDO:0002529,MedGen:C0553723|Human Phenotype Ontology:HP:0010623,Human Phenotype Ontology:HP:0100013,MONDO:MONDO:0021100,MeSH:D001943,MedGen:C1458155|Human Phenotype Ontology:HP:0006725,MONDO:MONDO:0006047,MedGen:C0281361|Human Phenotype Ontology:HP:0001402,Human Phenotype Ontology:HP:0002899,Human Phenotype Ontology:HP:0003007,Human Phenotype Ontology:HP:0006750,MONDO:MONDO:0007256,MedGen:C2239176,OMIM:114550,Orphanet:88673|Human Phenotype Ontology:HP:0033770,MONDO:MONDO:0005036,MedGen:C0278701|Human Phenotype Ontology:HP:0012056,MONDO:MONDO:0005012,MeSH:C562393,MedGen:C0151779|MONDO:MONDO:0006046,MedGen:C0279663|MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524|Gene:553989,MedGen:C1835398,OMIM:151623,Orphanet:524|MedGen:C3661900] | |
281_ASP | VAL |
ClinVar chr17:7577096 |
rs587781525
|
Pathogenic/Likely pathogenic | - | not provided|Hereditary cancer-predisposing syndrome|B-cell chronic lymphocytic leukemia|Glioblastoma|Ovarian serous cystadenocarcinoma|Transitional cell carcinoma of the bladder|Pancreatic adenocarcinoma|Lung adenocarcinoma|Malignant melanoma of skin|Multiple myeloma|Gastric adenocarcinoma|Hepatocellular carcinoma|Neuroblastoma|Malignant neoplasm of body of uterus|Squamous cell lung carcinoma|Uterine carcinosarcoma|Squamous cell carcinoma of the skin|Papillary renal cell carcinoma type 1|Squamous cell carcinoma of the head and neck|Breast neoplasm|Li-Fraumeni syndrome|Li-Fraumeni syndrome 1 [MedGen:C3661900|MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162|Human Phenotype Ontology:HP:0005550,Human Phenotype Ontology:HP:0006734,Human Phenotype Ontology:HP:0006760,MONDO:MONDO:0004948,MeSH:D015451,MedGen:C0023434,OMIM:151400,Orphanet:67038|MONDO:MONDO:0018177,MeSH:D005909,MedGen:C0017636,Orphanet:360|MONDO:MONDO:0006046,MedGen:C0279663|Human Phenotype Ontology:HP:0006740,MONDO:MONDO:0005611,MedGen:C0279680|Human Phenotype Ontology:HP:0006725,MONDO:MONDO:0006047,MedGen:C0281361|Human Phenotype Ontology:HP:0030078,MONDO:MONDO:0005061,MeSH:D000077192,MedGen:C0152013|Human Phenotype Ontology:HP:0012056,MONDO:MONDO:0005012,MeSH:C562393,MedGen:C0151779|Human Phenotype Ontology:HP:0006775,MONDO:MONDO:0009693,MeSH:D009101,MedGen:C0026764,OMIM:254500,Orphanet:29073,Orphanet:85443|Human Phenotype Ontology:HP:0033770,MONDO:MONDO:0005036,MedGen:C0278701|Human Phenotype Ontology:HP:0001402,Human Phenotype Ontology:HP:0002899,Human Phenotype Ontology:HP:0003007,Human Phenotype Ontology:HP:0006750,MONDO:MONDO:0007256,MedGen:C2239176,OMIM:114550,Orphanet:88673|Human Phenotype Ontology:HP:0003006,Human Phenotype Ontology:HP:0006738,MONDO:MONDO:0005072,MeSH:D009447,MedGen:C0027819,Orphanet:635|MedGen:C0153574|Human Phenotype Ontology:HP:0030359,MONDO:MONDO:0005097,MedGen:C0149782|MONDO:MONDO:0006485,MedGen:C0280630|Human Phenotype Ontology:HP:0006739,Human Phenotype Ontology:HP:0007614,MONDO:MONDO:0002529,MedGen:C0553723|Human Phenotype Ontology:HP:0011797,MedGen:C1336839,OMIM:605074,Orphanet:47044|MONDO:MONDO:0010150,MeSH:D000077195,MedGen:C1168401,OMIM:275355,Orphanet:67037|Human Phenotype Ontology:HP:0010623,Human Phenotype Ontology:HP:0100013,MONDO:MONDO:0021100,MeSH:D001943,MedGen:C1458155|MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524|Gene:553989,MedGen:C1835398,OMIM:151623,Orphanet:524] | |
281_ASP | TYR |
ClinVar chr17:7577097 |
rs764146326
|
Pathogenic | - | Transitional cell carcinoma of the bladder|Breast neoplasm|B-cell chronic lymphocytic leukemia|Squamous cell lung carcinoma|Squamous cell carcinoma of the head and neck|Pancreatic adenocarcinoma|Multiple myeloma|Lung adenocarcinoma|Papillary renal cell carcinoma type 1|Ovarian serous cystadenocarcinoma|Gastric adenocarcinoma|Squamous cell carcinoma of the skin|Malignant melanoma of skin|Hepatocellular carcinoma|Glioblastoma|Malignant neoplasm of body of uterus|Neuroblastoma|Uterine carcinosarcoma|Li-Fraumeni syndrome [Human Phenotype Ontology:HP:0006740,MONDO:MONDO:0005611,MedGen:C0279680|Human Phenotype Ontology:HP:0010623,Human Phenotype Ontology:HP:0100013,MONDO:MONDO:0021100,MeSH:D001943,MedGen:C1458155|Human Phenotype Ontology:HP:0005550,Human Phenotype Ontology:HP:0006734,Human Phenotype Ontology:HP:0006760,MONDO:MONDO:0004948,MeSH:D015451,MedGen:C0023434,OMIM:151400,Orphanet:67038|Human Phenotype Ontology:HP:0030359,MONDO:MONDO:0005097,MedGen:C0149782|MONDO:MONDO:0010150,MeSH:D000077195,MedGen:C1168401,OMIM:275355,Orphanet:67037|Human Phenotype Ontology:HP:0006725,MONDO:MONDO:0006047,MedGen:C0281361|Human Phenotype Ontology:HP:0006775,MONDO:MONDO:0009693,MeSH:D009101,MedGen:C0026764,OMIM:254500,Orphanet:29073,Orphanet:85443|Human Phenotype Ontology:HP:0030078,MONDO:MONDO:0005061,MeSH:D000077192,MedGen:C0152013|Human Phenotype Ontology:HP:0011797,MedGen:C1336839,OMIM:605074,Orphanet:47044|MONDO:MONDO:0006046,MedGen:C0279663|Human Phenotype Ontology:HP:0033770,MONDO:MONDO:0005036,MedGen:C0278701|Human Phenotype Ontology:HP:0006739,Human Phenotype Ontology:HP:0007614,MONDO:MONDO:0002529,MedGen:C0553723|Human Phenotype Ontology:HP:0012056,MONDO:MONDO:0005012,MeSH:C562393,MedGen:C0151779|Human Phenotype Ontology:HP:0001402,Human Phenotype Ontology:HP:0002899,Human Phenotype Ontology:HP:0003007,Human Phenotype Ontology:HP:0006750,MONDO:MONDO:0007256,MedGen:C2239176,OMIM:114550,Orphanet:88673|MONDO:MONDO:0018177,MeSH:D005909,MedGen:C0017636,Orphanet:360|MedGen:C0153574|Human Phenotype Ontology:HP:0003006,Human Phenotype Ontology:HP:0006738,MONDO:MONDO:0005072,MeSH:D009447,MedGen:C0027819,Orphanet:635|MONDO:MONDO:0006485,MedGen:C0280630|MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524] | |
281_ASP | ASN |
ClinVar chr17:7577097 |
rs764146326
|
Pathogenic | - | Multiple myeloma|Hepatocellular carcinoma|Neuroblastoma|B-cell chronic lymphocytic leukemia|Gastric adenocarcinoma|Glioblastoma|Squamous cell carcinoma of the skin|Breast neoplasm|Malignant melanoma of skin|Ovarian serous cystadenocarcinoma|Transitional cell carcinoma of the bladder|Uterine carcinosarcoma|Pancreatic adenocarcinoma|Papillary renal cell carcinoma type 1|Squamous cell lung carcinoma|Malignant neoplasm of body of uterus|Lung adenocarcinoma|Squamous cell carcinoma of the head and neck|Neoplasm of ovary|Li-Fraumeni syndrome|Hereditary cancer-predisposing syndrome [Human Phenotype Ontology:HP:0006775,MONDO:MONDO:0009693,MeSH:D009101,MedGen:C0026764,OMIM:254500,Orphanet:29073,Orphanet:85443|Human Phenotype Ontology:HP:0001402,Human Phenotype Ontology:HP:0002899,Human Phenotype Ontology:HP:0003007,Human Phenotype Ontology:HP:0006750,MONDO:MONDO:0007256,MedGen:C2239176,OMIM:114550,Orphanet:88673|Human Phenotype Ontology:HP:0003006,Human Phenotype Ontology:HP:0006738,MONDO:MONDO:0005072,MeSH:D009447,MedGen:C0027819,Orphanet:635|Human Phenotype Ontology:HP:0005550,Human Phenotype Ontology:HP:0006734,Human Phenotype Ontology:HP:0006760,MONDO:MONDO:0004948,MeSH:D015451,MedGen:C0023434,OMIM:151400,Orphanet:67038|Human Phenotype Ontology:HP:0033770,MONDO:MONDO:0005036,MedGen:C0278701|MONDO:MONDO:0018177,MeSH:D005909,MedGen:C0017636,Orphanet:360|Human Phenotype Ontology:HP:0006739,Human Phenotype Ontology:HP:0007614,MONDO:MONDO:0002529,MedGen:C0553723|Human Phenotype Ontology:HP:0010623,Human Phenotype Ontology:HP:0100013,MONDO:MONDO:0021100,MeSH:D001943,MedGen:C1458155|Human Phenotype Ontology:HP:0012056,MONDO:MONDO:0005012,MeSH:C562393,MedGen:C0151779|MONDO:MONDO:0006046,MedGen:C0279663|Human Phenotype Ontology:HP:0006740,MONDO:MONDO:0005611,MedGen:C0279680|MONDO:MONDO:0006485,MedGen:C0280630|Human Phenotype Ontology:HP:0006725,MONDO:MONDO:0006047,MedGen:C0281361|Human Phenotype Ontology:HP:0011797,MedGen:C1336839,OMIM:605074,Orphanet:47044|Human Phenotype Ontology:HP:0030359,MONDO:MONDO:0005097,MedGen:C0149782|MedGen:C0153574|Human Phenotype Ontology:HP:0030078,MONDO:MONDO:0005061,MeSH:D000077192,MedGen:C0152013|MONDO:MONDO:0010150,MeSH:D000077195,MedGen:C1168401,OMIM:275355,Orphanet:67037|Human Phenotype Ontology:HP:0100615,MONDO:MONDO:0021068,MeSH:D010051,MedGen:C0919267,OMIM:167000|MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524|MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162] | |
281_ASP | HIS |
ClinVar chr17:7577097 |
rs764146326
|
Pathogenic | - | Malignant melanoma of skin|Uterine carcinosarcoma|Squamous cell lung carcinoma|B-cell chronic lymphocytic leukemia|Squamous cell carcinoma of the skin|Papillary renal cell carcinoma type 1|Gastric adenocarcinoma|Neuroblastoma|Squamous cell carcinoma of the head and neck|Multiple myeloma|Lung adenocarcinoma|Malignant neoplasm of body of uterus|Ovarian serous cystadenocarcinoma|Pancreatic adenocarcinoma|Glioblastoma|Transitional cell carcinoma of the bladder|Breast neoplasm|Hepatocellular carcinoma|Gallbladder cancer|Li-Fraumeni syndrome|Hereditary cancer-predisposing syndrome [Human Phenotype Ontology:HP:0012056,MONDO:MONDO:0005012,MeSH:C562393,MedGen:C0151779|MONDO:MONDO:0006485,MedGen:C0280630|Human Phenotype Ontology:HP:0030359,MONDO:MONDO:0005097,MedGen:C0149782|Human Phenotype Ontology:HP:0005550,Human Phenotype Ontology:HP:0006734,Human Phenotype Ontology:HP:0006760,MONDO:MONDO:0004948,MeSH:D015451,MedGen:C0023434,OMIM:151400,Orphanet:67038|Human Phenotype Ontology:HP:0006739,Human Phenotype Ontology:HP:0007614,MONDO:MONDO:0002529,MedGen:C0553723|Human Phenotype Ontology:HP:0011797,MedGen:C1336839,OMIM:605074,Orphanet:47044|Human Phenotype Ontology:HP:0033770,MONDO:MONDO:0005036,MedGen:C0278701|Human Phenotype Ontology:HP:0003006,Human Phenotype Ontology:HP:0006738,MONDO:MONDO:0005072,MeSH:D009447,MedGen:C0027819,Orphanet:635|MONDO:MONDO:0010150,MeSH:D000077195,MedGen:C1168401,OMIM:275355,Orphanet:67037|Human Phenotype Ontology:HP:0006775,MONDO:MONDO:0009693,MeSH:D009101,MedGen:C0026764,OMIM:254500,Orphanet:29073,Orphanet:85443|Human Phenotype Ontology:HP:0030078,MONDO:MONDO:0005061,MeSH:D000077192,MedGen:C0152013|MedGen:C0153574|MONDO:MONDO:0006046,MedGen:C0279663|Human Phenotype Ontology:HP:0006725,MONDO:MONDO:0006047,MedGen:C0281361|MONDO:MONDO:0018177,MeSH:D005909,MedGen:C0017636,Orphanet:360|Human Phenotype Ontology:HP:0006740,MONDO:MONDO:0005611,MedGen:C0279680|Human Phenotype Ontology:HP:0010623,Human Phenotype Ontology:HP:0100013,MONDO:MONDO:0021100,MeSH:D001943,MedGen:C1458155|Human Phenotype Ontology:HP:0001402,Human Phenotype Ontology:HP:0002899,Human Phenotype Ontology:HP:0003007,Human Phenotype Ontology:HP:0006750,MONDO:MONDO:0007256,MedGen:C2239176,OMIM:114550,Orphanet:88673|MONDO:MONDO:0005411,MedGen:C0153452|MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524|MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162] | |
281_ASP | ALA |
ClinVar chr17:7577096 |
rs587781525
|
Likely pathogenic | - | Uterine carcinosarcoma|Gastric adenocarcinoma|Breast neoplasm|Squamous cell carcinoma of the head and neck|Hepatocellular carcinoma|Lung adenocarcinoma|Squamous cell carcinoma of the skin|Multiple myeloma|Pancreatic adenocarcinoma|Neuroblastoma|Papillary renal cell carcinoma type 1|Malignant neoplasm of body of uterus|B-cell chronic lymphocytic leukemia|Malignant melanoma of skin|Glioblastoma|Squamous cell lung carcinoma|Transitional cell carcinoma of the bladder|Ovarian serous cystadenocarcinoma|Adrenocortical carcinoma, hereditary [MONDO:MONDO:0006485,MedGen:C0280630|Human Phenotype Ontology:HP:0033770,MONDO:MONDO:0005036,MedGen:C0278701|Human Phenotype Ontology:HP:0010623,Human Phenotype Ontology:HP:0100013,MONDO:MONDO:0021100,MeSH:D001943,MedGen:C1458155|MONDO:MONDO:0010150,MeSH:D000077195,MedGen:C1168401,OMIM:275355,Orphanet:67037|Human Phenotype Ontology:HP:0001402,Human Phenotype Ontology:HP:0002899,Human Phenotype Ontology:HP:0003007,Human Phenotype Ontology:HP:0006750,MONDO:MONDO:0007256,MedGen:C2239176,OMIM:114550,Orphanet:88673|Human Phenotype Ontology:HP:0030078,MONDO:MONDO:0005061,MeSH:D000077192,MedGen:C0152013|Human Phenotype Ontology:HP:0006739,Human Phenotype Ontology:HP:0007614,MONDO:MONDO:0002529,MedGen:C0553723|Human Phenotype Ontology:HP:0006775,MONDO:MONDO:0009693,MeSH:D009101,MedGen:C0026764,OMIM:254500,Orphanet:29073,Orphanet:85443|Human Phenotype Ontology:HP:0006725,MONDO:MONDO:0006047,MedGen:C0281361|Human Phenotype Ontology:HP:0003006,Human Phenotype Ontology:HP:0006738,MONDO:MONDO:0005072,MeSH:D009447,MedGen:C0027819,Orphanet:635|Human Phenotype Ontology:HP:0011797,MedGen:C1336839,OMIM:605074,Orphanet:47044|MedGen:C0153574|Human Phenotype Ontology:HP:0005550,Human Phenotype Ontology:HP:0006734,Human Phenotype Ontology:HP:0006760,MONDO:MONDO:0004948,MeSH:D015451,MedGen:C0023434,OMIM:151400,Orphanet:67038|Human Phenotype Ontology:HP:0012056,MONDO:MONDO:0005012,MeSH:C562393,MedGen:C0151779|MONDO:MONDO:0018177,MeSH:D005909,MedGen:C0017636,Orphanet:360|Human Phenotype Ontology:HP:0030359,MONDO:MONDO:0005097,MedGen:C0149782|Human Phenotype Ontology:HP:0006740,MONDO:MONDO:0005611,MedGen:C0279680|MONDO:MONDO:0006046,MedGen:C0279663|MONDO:MONDO:0008734,MedGen:C1859972,OMIM:202300,Orphanet:1501] | |
281_ASP | GLU |
ClinVar chr17:7577095 |
rs1057519984
|
Likely pathogenic | - | Li-Fraumeni syndrome|Carcinoma of colon|not provided|Neoplasm of ovary|Hereditary cancer-predisposing syndrome [MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524|MONDO:MONDO:0002032,MedGen:C0699790|MedGen:C3661900|Human Phenotype Ontology:HP:0100615,MONDO:MONDO:0021068,MeSH:D010051,MedGen:C0919267,OMIM:167000|MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162] | |
282_ARG | LEU | VAR_006015 |
rs730882008
|
US | - | Sporadic cancers | |
282_ARG | TRP | VAR_006016 |
rs28934574
|
LP/P | - | Li-Fraumeni syndrome (LFS) [MIM:151623] | |
282_ARG | GLY | VAR_045384 |
rs28934574
|
LP/P | - | Li-Fraumeni syndrome (LFS) [MIM:151623] | |
282_ARG | HIS | VAR_045385 |
-
|
US | - | A sporadic cancer | |
282_ARG | PRO | VAR_045386 |
rs730882008
|
US | - | Sporadic cancers | |
282_ARG | GLN | VAR_045387 |
rs730882008
|
US | - | A familial cancer not matching LFS | |
282_ARG | TRP |
ClinVar chr17:7577094 |
rs28934574
|
Pathogenic/Likely pathogenic | - | Li-fraumeni-like syndrome|Li-Fraumeni syndrome|Li-Fraumeni syndrome 1|Hereditary cancer-predisposing syndrome|not provided|Squamous cell carcinoma of the skin|Ovarian serous cystadenocarcinoma|Squamous cell lung carcinoma|Neoplasm of the large intestine|Transitional cell carcinoma of the bladder|Hepatocellular carcinoma|Pancreatic adenocarcinoma|Non-Hodgkin lymphoma|Malignant melanoma of skin|Carcinoma of esophagus|Lung adenocarcinoma|Glioblastoma|Prostate adenocarcinoma|Neoplasm of brain|Breast neoplasm|Gastric adenocarcinoma|Squamous cell carcinoma of the head and neck|Papillary renal cell carcinoma type 1|Malignant neoplasm of body of uterus|Astrocytoma, anaplastic [MONDO:MONDO:0800290,MedGen:C2675080|MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524|Gene:553989,MedGen:C1835398,OMIM:151623,Orphanet:524|MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162|MedGen:C3661900|Human Phenotype Ontology:HP:0006739,Human Phenotype Ontology:HP:0007614,MONDO:MONDO:0002529,MedGen:C0553723|MONDO:MONDO:0006046,MedGen:C0279663|Human Phenotype Ontology:HP:0030359,MONDO:MONDO:0005097,MedGen:C0149782|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|Human Phenotype Ontology:HP:0006740,MONDO:MONDO:0005611,MedGen:C0279680|Human Phenotype Ontology:HP:0001402,Human Phenotype Ontology:HP:0002899,Human Phenotype Ontology:HP:0003007,Human Phenotype Ontology:HP:0006750,MONDO:MONDO:0007256,MedGen:C2239176,OMIM:114550,Orphanet:88673|Human Phenotype Ontology:HP:0006725,MONDO:MONDO:0006047,MedGen:C0281361|Human Phenotype Ontology:HP:0012539,MONDO:MONDO:0018908,MedGen:C0024305,Orphanet:547|Human Phenotype Ontology:HP:0012056,MONDO:MONDO:0005012,MeSH:C562393,MedGen:C0151779|Human Phenotype Ontology:HP:0011459,MONDO:MONDO:0019086,MedGen:C0152018,Orphanet:70482|Human Phenotype Ontology:HP:0030078,MONDO:MONDO:0005061,MeSH:D000077192,MedGen:C0152013|MONDO:MONDO:0018177,MeSH:D005909,MedGen:C0017636,Orphanet:360|MONDO:MONDO:0005082,MedGen:C0007112|Human Phenotype Ontology:HP:0030692,MONDO:MONDO:0021211,MeSH:D001932,MedGen:C0006118|Human Phenotype Ontology:HP:0010623,Human Phenotype Ontology:HP:0100013,MONDO:MONDO:0021100,MeSH:D001943,MedGen:C1458155|Human Phenotype Ontology:HP:0033770,MONDO:MONDO:0005036,MedGen:C0278701|MONDO:MONDO:0010150,MeSH:D000077195,MedGen:C1168401,OMIM:275355,Orphanet:67037|Human Phenotype Ontology:HP:0011797,MedGen:C1336839,OMIM:605074,Orphanet:47044|MedGen:C0153574|MONDO:MONDO:0016684,MedGen:C0334579,Orphanet:251589]; Pleomorphic xanthoastrocytoma|Neoplasm of ovary|Colorectal cancer|Diffuse pediatric-type high-grade glioma, H3-wildtype and IDH-wildtype [Human Phenotype Ontology:HP:0033682,MONDO:MONDO:0016690,MedGen:C0334586,Orphanet:251607|Human Phenotype Ontology:HP:0100615,MONDO:MONDO:0021068,MeSH:D010051,MedGen:C0919267,OMIM:167000|MONDO:MONDO:0005575,MedGen:C0346629,OMIM:114500|MONDO:MONDO:0858939,MedGen:C5669918] | |
282_ARG | GLY |
ClinVar chr17:7577094 |
rs28934574
|
Pathogenic | - | Hereditary cancer-predisposing syndrome|Pancreatic adenocarcinoma|Squamous cell carcinoma of the skin|Transitional cell carcinoma of the bladder|Papillary renal cell carcinoma type 1|Lung adenocarcinoma|Carcinoma of esophagus|Neoplasm of brain|Prostate adenocarcinoma|Glioblastoma|Malignant neoplasm of body of uterus|Gastric adenocarcinoma|Squamous cell lung carcinoma|Ovarian serous cystadenocarcinoma|Breast neoplasm|Non-Hodgkin lymphoma|Squamous cell carcinoma of the head and neck|Hepatocellular carcinoma|Malignant melanoma of skin|Neoplasm of the large intestine|Neoplasm of ovary|Li-Fraumeni syndrome|Li-Fraumeni syndrome 1 [MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162|Human Phenotype Ontology:HP:0006725,MONDO:MONDO:0006047,MedGen:C0281361|Human Phenotype Ontology:HP:0006739,Human Phenotype Ontology:HP:0007614,MONDO:MONDO:0002529,MedGen:C0553723|Human Phenotype Ontology:HP:0006740,MONDO:MONDO:0005611,MedGen:C0279680|Human Phenotype Ontology:HP:0011797,MedGen:C1336839,OMIM:605074,Orphanet:47044|Human Phenotype Ontology:HP:0030078,MONDO:MONDO:0005061,MeSH:D000077192,MedGen:C0152013|Human Phenotype Ontology:HP:0011459,MONDO:MONDO:0019086,MedGen:C0152018,Orphanet:70482|Human Phenotype Ontology:HP:0030692,MONDO:MONDO:0021211,MeSH:D001932,MedGen:C0006118|MONDO:MONDO:0005082,MedGen:C0007112|MONDO:MONDO:0018177,MeSH:D005909,MedGen:C0017636,Orphanet:360|MedGen:C0153574|Human Phenotype Ontology:HP:0033770,MONDO:MONDO:0005036,MedGen:C0278701|Human Phenotype Ontology:HP:0030359,MONDO:MONDO:0005097,MedGen:C0149782|MONDO:MONDO:0006046,MedGen:C0279663|Human Phenotype Ontology:HP:0010623,Human Phenotype Ontology:HP:0100013,MONDO:MONDO:0021100,MeSH:D001943,MedGen:C1458155|Human Phenotype Ontology:HP:0012539,MONDO:MONDO:0018908,MedGen:C0024305,Orphanet:547|MONDO:MONDO:0010150,MeSH:D000077195,MedGen:C1168401,OMIM:275355,Orphanet:67037|Human Phenotype Ontology:HP:0001402,Human Phenotype Ontology:HP:0002899,Human Phenotype Ontology:HP:0003007,Human Phenotype Ontology:HP:0006750,MONDO:MONDO:0007256,MedGen:C2239176,OMIM:114550,Orphanet:88673|Human Phenotype Ontology:HP:0012056,MONDO:MONDO:0005012,MeSH:C562393,MedGen:C0151779|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|Human Phenotype Ontology:HP:0100615,MONDO:MONDO:0021068,MeSH:D010051,MedGen:C0919267,OMIM:167000|MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524|Gene:553989,MedGen:C1835398,OMIM:151623,Orphanet:524] | |
282_ARG | PRO |
ClinVar chr17:7577093 |
rs730882008
|
Pathogenic/Likely pathogenic | - | Neoplasm of brain|Non-Hodgkin lymphoma|Squamous cell carcinoma of the skin|Transitional cell carcinoma of the bladder|Ovarian serous cystadenocarcinoma|Gastric adenocarcinoma|Lung adenocarcinoma|Malignant melanoma of skin|Papillary renal cell carcinoma type 1|Glioblastoma|Prostate adenocarcinoma|Squamous cell lung carcinoma|Hepatocellular carcinoma|Pancreatic adenocarcinoma|Carcinoma of esophagus|Neoplasm of the large intestine|Malignant neoplasm of body of uterus|Breast neoplasm|Hereditary cancer-predisposing syndrome|Squamous cell carcinoma of the head and neck|Li-Fraumeni syndrome|Li-Fraumeni syndrome 1|12 conditions [Human Phenotype Ontology:HP:0030692,MONDO:MONDO:0021211,MeSH:D001932,MedGen:C0006118|Human Phenotype Ontology:HP:0012539,MONDO:MONDO:0018908,MedGen:C0024305,Orphanet:547|Human Phenotype Ontology:HP:0006739,Human Phenotype Ontology:HP:0007614,MONDO:MONDO:0002529,MedGen:C0553723|Human Phenotype Ontology:HP:0006740,MONDO:MONDO:0005611,MedGen:C0279680|MONDO:MONDO:0006046,MedGen:C0279663|Human Phenotype Ontology:HP:0033770,MONDO:MONDO:0005036,MedGen:C0278701|Human Phenotype Ontology:HP:0030078,MONDO:MONDO:0005061,MeSH:D000077192,MedGen:C0152013|Human Phenotype Ontology:HP:0012056,MONDO:MONDO:0005012,MeSH:C562393,MedGen:C0151779|Human Phenotype Ontology:HP:0011797,MedGen:C1336839,OMIM:605074,Orphanet:47044|MONDO:MONDO:0018177,MeSH:D005909,MedGen:C0017636,Orphanet:360|MONDO:MONDO:0005082,MedGen:C0007112|Human Phenotype Ontology:HP:0030359,MONDO:MONDO:0005097,MedGen:C0149782|Human Phenotype Ontology:HP:0001402,Human Phenotype Ontology:HP:0002899,Human Phenotype Ontology:HP:0003007,Human Phenotype Ontology:HP:0006750,MONDO:MONDO:0007256,MedGen:C2239176,OMIM:114550,Orphanet:88673|Human Phenotype Ontology:HP:0006725,MONDO:MONDO:0006047,MedGen:C0281361|Human Phenotype Ontology:HP:0011459,MONDO:MONDO:0019086,MedGen:C0152018,Orphanet:70482|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|MedGen:C0153574|Human Phenotype Ontology:HP:0010623,Human Phenotype Ontology:HP:0100013,MONDO:MONDO:0021100,MeSH:D001943,MedGen:C1458155|MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162|MONDO:MONDO:0010150,MeSH:D000077195,MedGen:C1168401,OMIM:275355,Orphanet:67037|MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524|Gene:553989,MedGen:C1835398,OMIM:151623,Orphanet:524|12 conditions] | |
283_ARG | CYS | VAR_006017 |
rs149633775
|
LP/P | - | Li-Fraumeni syndrome (LFS) [MIM:151623] | |
283_ARG | GLY | VAR_006018 |
-
|
US | - | Sporadic cancers | |
283_ARG | HIS | VAR_006019 |
rs371409680
|
US | - | A brain tumor with no family history | |
283_ARG | PRO | VAR_006020 |
-
|
US | - | Sporadic cancers | |
283_ARG | LEU | VAR_045388 |
-
|
US | - | Sporadic cancers | |
283_ARG | SER | VAR_045389 |
rs149633775
|
US | - | A sporadic cancer | |
284_THR | ALA | VAR_006021 |
-
|
US | - | Sporadic cancers | |
284_THR | PRO | VAR_006022 |
rs1204379654
|
US | - | Sporadic cancers | |
284_THR | ILE | VAR_045390 |
rs863224685
|
US | - | Sporadic cancers | |
284_THR | LYS | VAR_045391 |
-
|
US | - | Sporadic cancers | |
285_GLU | LYS | VAR_006023 |
rs112431538
|
US | - | Sporadic cancers | |
285_GLU | GLN | VAR_006024 |
-
|
LP/P | - | Li-Fraumeni syndrome (LFS) [MIM:151623] | |
285_GLU | VAL | VAR_006025 |
rs121912667
|
US | - | Sporadic cancers | |
285_GLU | ALA | VAR_045392 |
-
|
US | - | A sporadic cancer | |
285_GLU | ASP | VAR_045393 |
-
|
US | - | Sporadic cancers | |
285_GLU | GLY | VAR_045394 |
-
|
US | - | Sporadic cancers | |
285_GLU | VAL |
ClinVar chr17:7577084 |
rs121912667
|
Pathogenic | - | Adrenocortical carcinoma, pediatric|Choroid plexus carcinoma|Li-Fraumeni syndrome [MedGen:C1859973|Human Phenotype Ontology:HP:0030392,MONDO:MONDO:0016718,MedGen:C0431109,Orphanet:251899|MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524] | |
285_GLU | LYS |
ClinVar chr17:7577085 |
rs112431538
|
Pathogenic/Likely pathogenic | - | not provided|Li-Fraumeni syndrome|Hereditary cancer-predisposing syndrome|Poly (ADP-Ribose) polymerase inhibitor response|Li-Fraumeni syndrome 1 [MedGen:C3661900|MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524|MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162|MedGen:CN322715|Gene:553989,MedGen:C1835398,OMIM:151623,Orphanet:524] | |
285_GLU | TER |
ClinVar chr17:7577085 |
-
|
Pathogenic | - | Li-Fraumeni syndrome [MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524] | |
286_GLU | ALA | VAR_006026 |
rs1057519985
|
LP/P | - | Li-Fraumeni syndrome (LFS) [MIM:151623] | |
286_GLU | ASP | VAR_006027 |
-
|
US | - | Sporadic cancers | |
286_GLU | GLY | VAR_006028 |
rs1057519985
|
US | - | Sporadic cancers | |
286_GLU | LYS | VAR_006029 |
rs786201059
|
US | - | Sporadic cancers | |
286_GLU | GLN | VAR_006030 |
rs786201059
|
US | - | Sporadic cancers | |
286_GLU | VAL | VAR_045395 |
rs1057519985
|
US | - | Sporadic cancers | |
286_GLU | LEU | VAR_045871 |
-
|
US | - | A sporadic cancer | |
286_GLU | LYS |
ClinVar chr17:7577082 |
rs786201059
|
Pathogenic | - | Hereditary cancer-predisposing syndrome|Transitional cell carcinoma of the bladder|not provided|Pancreatic adenocarcinoma|Vulvar adenocarcinoma of mammary gland type|Squamous cell carcinoma of the skin|Small cell lung carcinoma|Ovarian serous cystadenocarcinoma|Lung adenocarcinoma|Li-Fraumeni syndrome|Squamous cell carcinoma of the head and neck|Acute myeloid leukemia|Neoplasm of the large intestine|Gastric adenocarcinoma|Breast neoplasm|Carcinoma of esophagus|Hepatocellular carcinoma|Malignant melanoma of skin|Neoplasm of brain|Li-Fraumeni syndrome 1 [MONDO:MONDO:0015356,MeSH:D009386,MedGen:C0027672,Orphanet:140162|Human Phenotype Ontology:HP:0006740,MONDO:MONDO:0005611,MedGen:C0279680|MedGen:C3661900|Human Phenotype Ontology:HP:0006725,MONDO:MONDO:0006047,MedGen:C0281361|MedGen:C4288013|Human Phenotype Ontology:HP:0006739,Human Phenotype Ontology:HP:0007614,MONDO:MONDO:0002529,MedGen:C0553723|Human Phenotype Ontology:HP:0030357,MONDO:MONDO:0008433,MeSH:D055752,MedGen:C0149925,OMIM:182280,Orphanet:70573|MONDO:MONDO:0006046,MedGen:C0279663|Human Phenotype Ontology:HP:0030078,MONDO:MONDO:0005061,MeSH:D000077192,MedGen:C0152013|MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524|MONDO:MONDO:0010150,MeSH:D000077195,MedGen:C1168401,OMIM:275355,Orphanet:67037|Human Phenotype Ontology:HP:0001914,Human Phenotype Ontology:HP:0004808,Human Phenotype Ontology:HP:0004843,Human Phenotype Ontology:HP:0005516,Human Phenotype Ontology:HP:0006724,Human Phenotype Ontology:HP:0006728,MONDO:MONDO:0018874,MeSH:D015470,MedGen:C0023467,OMIM:601626,Orphanet:519|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|Human Phenotype Ontology:HP:0033770,MONDO:MONDO:0005036,MedGen:C0278701|Human Phenotype Ontology:HP:0010623,Human Phenotype Ontology:HP:0100013,MONDO:MONDO:0021100,MeSH:D001943,MedGen:C1458155|Human Phenotype Ontology:HP:0011459,MONDO:MONDO:0019086,MedGen:C0152018,Orphanet:70482|Human Phenotype Ontology:HP:0001402,Human Phenotype Ontology:HP:0002899,Human Phenotype Ontology:HP:0003007,Human Phenotype Ontology:HP:0006750,MONDO:MONDO:0007256,MedGen:C2239176,OMIM:114550,Orphanet:88673|Human Phenotype Ontology:HP:0012056,MONDO:MONDO:0005012,MeSH:C562393,MedGen:C0151779|Human Phenotype Ontology:HP:0030692,MONDO:MONDO:0021211,MeSH:D001932,MedGen:C0006118|Gene:553989,MedGen:C1835398,OMIM:151623,Orphanet:524] | |
286_GLU | ALA |
ClinVar chr17:7577081 |
rs1057519985
|
Likely pathogenic | - | Lung adenocarcinoma|Neoplasm of brain|Neoplasm of the large intestine|Hepatocellular carcinoma|Acute myeloid leukemia|Pancreatic adenocarcinoma|Transitional cell carcinoma of the bladder|Squamous cell carcinoma of the head and neck|Breast neoplasm|Malignant melanoma of skin|Carcinoma of esophagus|Gastric adenocarcinoma|Ovarian serous cystadenocarcinoma|Squamous cell carcinoma of the skin|Small cell lung carcinoma [Human Phenotype Ontology:HP:0030078,MONDO:MONDO:0005061,MeSH:D000077192,MedGen:C0152013|Human Phenotype Ontology:HP:0030692,MONDO:MONDO:0021211,MeSH:D001932,MedGen:C0006118|Human Phenotype Ontology:HP:0100834,MONDO:MONDO:0005335,MeSH:D015179,MedGen:C0009404|Human Phenotype Ontology:HP:0001402,Human Phenotype Ontology:HP:0002899,Human Phenotype Ontology:HP:0003007,Human Phenotype Ontology:HP:0006750,MONDO:MONDO:0007256,MedGen:C2239176,OMIM:114550,Orphanet:88673|Human Phenotype Ontology:HP:0001914,Human Phenotype Ontology:HP:0004808,Human Phenotype Ontology:HP:0004843,Human Phenotype Ontology:HP:0005516,Human Phenotype Ontology:HP:0006724,Human Phenotype Ontology:HP:0006728,MONDO:MONDO:0018874,MeSH:D015470,MedGen:C0023467,OMIM:601626,Orphanet:519|Human Phenotype Ontology:HP:0006725,MONDO:MONDO:0006047,MedGen:C0281361|Human Phenotype Ontology:HP:0006740,MONDO:MONDO:0005611,MedGen:C0279680|MONDO:MONDO:0010150,MeSH:D000077195,MedGen:C1168401,OMIM:275355,Orphanet:67037|Human Phenotype Ontology:HP:0010623,Human Phenotype Ontology:HP:0100013,MONDO:MONDO:0021100,MeSH:D001943,MedGen:C1458155|Human Phenotype Ontology:HP:0012056,MONDO:MONDO:0005012,MeSH:C562393,MedGen:C0151779|Human Phenotype Ontology:HP:0011459,MONDO:MONDO:0019086,MedGen:C0152018,Orphanet:70482|Human Phenotype Ontology:HP:0033770,MONDO:MONDO:0005036,MedGen:C0278701|MONDO:MONDO:0006046,MedGen:C0279663|Human Phenotype Ontology:HP:0006739,Human Phenotype Ontology:HP:0007614,MONDO:MONDO:0002529,MedGen:C0553723|Human Phenotype Ontology:HP:0030357,MONDO:MONDO:0008433,MeSH:D055752,MedGen:C0149925,OMIM:182280,Orphanet:70573] | |
286_GLU | TER |
ClinVar chr17:7577082 |
rs786201059
|
Pathogenic | - | Neoplasm of ovary|Li-Fraumeni syndrome [Human Phenotype Ontology:HP:0100615,MONDO:MONDO:0021068,MeSH:D010051,MedGen:C0919267,OMIM:167000|MONDO:MONDO:0018875,MedGen:C0085390,OMIM:PS151623,Orphanet:524] | |
287_GLU | ASP | VAR_045396 |
rs748891343
|
US | - | Sporadic cancers | |
287_GLU | GLY | VAR_045397 |
-
|
US | - | Sporadic cancers | |
287_GLU | LYS | VAR_045398 |
rs587782006
|
US | - | Sporadic cancers | |
287_GLU | VAL | VAR_045399 |
-
|
US | - | Sporadic cancers | |
287_GLU | ALA | VAR_047204 |
-
|
US | - | A sporadic cancer | |
288_ASN | ASP | VAR_045400 |
-
|
US | - | A sporadic cancer | |
288_ASN | LYS | VAR_045401 |
-
|
US | - | Sporadic cancers | |
288_ASN | SER | VAR_045402 |
-
|
US | - | Sporadic cancers | |
288_ASN | THR | VAR_045403 |
-
|
US | - | Sporadic cancers | |
288_ASN | TYR | VAR_045404 |
-
|
US | - | Sporadic cancers | |
289_LEU | PHE | VAR_045405 |
-
|
US | - | Sporadic cancers | |
289_LEU | HIS | VAR_045406 |
-
|
US | - | Sporadic cancers | |
289_LEU | PRO | VAR_045407 |
-
|
US | - | Sporadic cancers | |
289_LEU | ARG | VAR_045408 |
-
|
US | - | A sporadic cancer | |
289_LEU | VAL | VAR_045409 |
rs1555525154
|
US | - | Sporadic cancers |