PDB ID 1CJD     CHAIN A
Protein name PROTEIN (MAJOR CAPSID PROTEIN (P3))
Uniprot Accession P22535
The number of similar proteins 24
The number of binding states 9
The number of binding partners 4

Coloring

Unicolor (beige)

The number of binding partners

Group

Binding
state		 Binding partners
1CJD (CHAIN: A)
1 P22535   P22535  
2 P22535   P22535   P22535  
3 P22535   P22535   P27391  
4 P22535   P22535   P22535   P27391  
5 P22535   P22535   P22535   P22535   P22535  
6 P22535   P22535   P22535   P27392   P27391  
7 P22535   P22535   P27392   P27384   P27391  
8 P22535   P22535   P22535   P22535   P22535   P22535  
9 P22535   P22535   P22535   P22535   P22535   P27391  

Downdload

Format:

Molecule viewer


Only interaction residues
#binding
partners
  2
  1
  0

Sequence information

1   AQVQQLTPAQ   QAALRNQQAM   AANLQARQIV   LQQSYPVIQQ   VETQTFDPAN   50
51   RSVFDVTPAN   VGIVKGFLVK   VTAAITNNHA   TEAVALTDFG   PANLVQRVIY   100
101   YDPDNQRHTE   TSGWHLHFVN   TAKQGAPFLS   SMVTDSPIKY   GDVMNVIDAP   150
151   ATIAAGATGE   LTMYYWVPLA   YSETDLTGAV   LANVPQSKQR   LKLEFANNNT   200
201   AFAAVGANPL   EAIYQGAGAA   DCEFEEISYT   VYQSYLDQLP   VGQNGYILPL   250
251   IDLSTLYNLE   NSAQAGLTPN   VDFVVQYANL   YRYLSTIAVF   DNGGSFNAGT   300
301   DINYLSQRTA   NFSDTRKLDP   KTWAAQTRRR   IATDFPKGVY   YCDNRDKPIY   350
351   TLQYGNVGFV   VNPKTVNQNA   RLLMGYEYFT   SRTELVNAGT   ISTT   400

Variants

Residue AA Source /
dbSNP		 Clinical
Significance
 Allele
Frequency
(> 0.0001)		 AlphaMissense
pathogenicity		 Disease name
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Reference

PiSite: a database of protein interaction sites using multiple binding states in the PDB, Miho Higurashi, Takashi Ishida and Kengo Kinoshita, Nucleic Acids Research 2009 37(Database issue):D360-D364

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